mRNA_E-fasciculatus_F_contig129.2189.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A6H5JUA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA3_9PHAE) HSP 1 Score: 441 bits (1135), Expect = 2.350e-150 Identity = 223/235 (94.89%), Postives = 230/235 (97.87%), Query Frame = 1
Query: 58 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFVMLHKDDLVETIVEAAGGALCR 762
MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPT+QPIWVKDVGSKLKTCVNGSETGEA+KE+SLKEGDEVKVGTTNSIM RVRFQALRFCATQLTAE+KAELKALSK+CGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDL GGTAKPLRPVPETA FGPVVTRSRRQGPFRVRHTADRRTHLSGDFF +LHKD+LVETIVEAAGGALCR
Sbjct: 1 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTDQPIWVKDVGSKLKTCVNGSETGEAHKEISLKEGDEVKVGTTNSIM-RVRFQALRFCATQLTAEEKAELKALSKRCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLVAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCR 234
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: D8LKB3_ECTSI (Nibrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB3_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 9.740e-150 Identity = 224/235 (95.32%), Postives = 229/235 (97.45%), Query Frame = 1
Query: 58 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFVMLHKDDLVETIVEAAGGALCR 762
MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGE +KE+SLKEGDEVKVGTTNSIM RVRFQALRFCATQLTAE+KAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLA GGTAKPLRPVPET FGPVVTRSRRQGPFRVRHTADRRTHLSGDFF +LHKD+LVETIVEAAGGALCR
Sbjct: 1 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGETHKEISLKEGDEVKVGTTNSIM-RVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETEAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCR 234
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A1A9V462_GLOAU (FHA domain-containing protein n=3 Tax=Glossina TaxID=44049 RepID=A0A1A9V462_GLOAU) HSP 1 Score: 79.0 bits (193), Expect = 4.700e-13 Identity = 72/231 (31.17%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 73 HTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGS--ETGEANKE--VSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFVMLHKD--DLVETIVEAAG 747
+T+GR + + D SVSR HA ++ ND Q +KD+GSK T N + NK+ +SLK D ++ G ++ V+ L + LT +++ +++ + GG V +W CTHL L N SS+T KL+ ALL +PV+ +LKDL AK + P+P + P + F + R+T L G F+ LH+ D+ +V++AG
Sbjct: 22 YTVGRLDADLELLNDSSVSRAHAVFQLIVKTKNDVQLQ---LKDLGSKYGTFHNKDIEKNKRLNKDECLSLKANDRIRFGRFENVWE-VKNHVLNVVISSLTKKEQTDVEEILGYMGGQVFTEWSNT-CTHL--LMNGSSITIKLLYALLNQKPVITSNYLKDLLKAIRAKKV-PLPNVEHYRPCFNEA-----FDLSRQPKRQTLLRGYTFIFLHRKHADMYGPLVQSAG 239
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A1Y1HX11_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HX11_KLENI) HSP 1 Score: 72.4 bits (176), Expect = 7.180e-11 Identity = 81/251 (32.27%), Postives = 120/251 (47.81%), Query Frame = 1
Query: 61 AEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPI-----WVKDVGSKLKTCVNGSETGEANK-----EVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAEL-KALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGL-RPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGP---FRVRHTADRRTHLSGDFFVMLHK----DDLVETIVEAAGGAL 756
A G + +GRK +V+ D++VSR HA+I VGP P E I +KD+ SK T +N K E LK+GD V G+T+ R+ F L C + KA++ + +K+ G + W +CTHL LA + L +G +PVV + W++ A T P +PVP+ ++F P T +R + P +V RR LSG F V+L D + ++ AAGG L
Sbjct: 23 APGEYKVGRKDCTVTINTDKTVSRLHADIIVGPSPTVLSPEGAIPRPFIKIKDL-SKFGTFINKQHESHPIKDLPDAEAHLKDGDIVTFGSTHCSF-RLTFIPLVLCLPCGLSTSKAQIVERAAKQIGAFLVDTWSP-QCTHL--LAEDGTALSPLFYEAVGAGKPVVTLEWIQAFAARET--PSKPVPDPSSFLPTFTVARARAPPASHQVALPEARRGLLSG-FVVLLAATAPYDPHLRDMISAAGGQL 265
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A1V9YMP5_9STRA (FHA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMP5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.810e-10 Identity = 72/256 (28.12%), Postives = 120/256 (46.88%), Query Frame = 1
Query: 1 MWLLDVLDPKTGDVSTTVAMAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPT-EQPIW-VKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSIM--SRVRFQALRFCATQLTAEDKAELKALSKKCG--GAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFVMLHKDDLVETIVEAAGG 750
MW+LD + + G TLGRKG++++FP D S+SR+HA ++VG + D ++P + + D S+ T VNG++ E N V L+ GD++ G ++++ S VR A +++ KA + L + C G + TH + A TEK++ AL+ PVV W++ + + +P F PV + P + T RR L DF V+ + +++A GG
Sbjct: 9 MWVLD-----WESEGVALRLVHGEWTLGRKGNALNFPNDSSISRQHAVLKVGALEHLDRIHDRPTFTLVDSKSRFGTFVNGAQIPE-NVPVDLRVGDKITFGAKSTVLVVSYVRMVA------RISRIQKANRRRLLEGCKYIGMHVVSDPIPEITHCIMDAGNFVATEKILWALVHAHPVVSSDWIQAVLARDSLS--SDLPRCEGFLPVHAADQAATPSYLLDT--RRCSLYNDFIVVFLVPTSMVALLQAMGG 248
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A1B0B7Y5_9MUSC (Uncharacterized protein n=3 Tax=Nemorhina TaxID=44051 RepID=A0A1B0B7Y5_9MUSC) HSP 1 Score: 68.6 bits (166), Expect = 1.540e-9 Identity = 66/233 (28.33%), Postives = 111/233 (47.64%), Query Frame = 1
Query: 73 HTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGEANKEVS------LKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFVMLHKD--DLVETIVEAAG 747
+T+GR + + D SVSR HA ++ ND Q +KDVGSK T N + E NK ++ LK D ++ G ++ V+ L + L+ ++ +++ + GG + +W CTHL+ N SS+T KL+ AL+ +P++ +LKDL AK + +P + P + F + R+T L F+ LH+ D+ +V++AG
Sbjct: 22 YTVGRLDADLELVNDSSVSRAHAVFQLIIKSKNDVQLQ---LKDVGSKYGTFHN--KDIEKNKRLNKDECLPLKANDRIRFGRFENVWE-VKNDVLNVVTSSLSKREQTDVEEILGYIGGQIFTEWSNT-CTHLIM--NGSSITIKLLYALINQKPIITSNYLKDLLKAIRAKKVS-LPNMEHYRPCFDET-----FDLSRQPKRQTLLRDYTFIFLHRKHADMYGPLVQSAG 239
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A139AMD5_GONPJ (NIBRIN_BRCT_II domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMD5_GONPJ) HSP 1 Score: 63.5 bits (153), Expect = 5.830e-8 Identity = 58/195 (29.74%), Postives = 94/195 (48.21%), Query Frame = 1
Query: 1 MWLLDVLDPKTGDVSTTVAMAEGIH-TLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTE----QPIWVKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSI-MSRVRFQALR----FCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLA 555
MW+L P T TTV + G ++GRK ++++P+++S+SR HA VG V T+ + + D L T VNG + EA + + +GD++ G T + + VRF+ R C + + K E+ L+ + W A CTHL L ++ VT K+V L R +V W++ L+
Sbjct: 1 MWILTGDSPSTH--GTTVWLKPGKEVSIGRKDGTLTYPQEKSISRSHAAFVVGNVVEGMVTDLNRFPSVTLTDNSKFLYTFVNGVPSTEATRIRQVADGDQLSFGNTIADGLPLVRFRLKRSPVVLCLSGVPKNVKKEMTGLAAVLDLKIEPDWTDA-CTHL--LMHSLKVTYKVVACLADCRHIVSDNWVRALS 190
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A7S3RE56_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RE56_EMIHU) HSP 1 Score: 62.8 bits (151), Expect = 6.110e-8 Identity = 61/205 (29.76%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 1 MWLLDVLDPKTGDVSTTVAMAEGIHTLGRKGSS-VSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGG-AVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFG 609
MWL+ G + V +EG +T+GR S+ V+ D+S+SRKH E+RVG + + + D+GSK T V+ S+ SL +G + +G + VR + L C + L+ D ++A + + G + S++W +HLV + +T KL+LAL PVV W++ +A A P+P+ + G
Sbjct: 9 MWLIADGSQTLGRLP--VPGSEGPYTVGRHESADVTVTGDKSISRKHLELRVGE------DGRTLRLTDLGSKFGTSVDNSKVDPGGT-ASLVDGASLSLGAK---VLTVRHEPLVLCYSGLSKADTEVVQAAAARLVGVSASKEWADGHTSHLVM--SKIKLTPKLMLALAHGCPVVAPAWVERVAARKAAA--EPLPDPSAVG 197
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: A0A0M0JXZ0_9EUKA (Nibrin (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXZ0_9EUKA) HSP 1 Score: 62.0 bits (149), Expect = 7.960e-8 Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 1
Query: 73 HTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVN-----GSETGEA-------------------NKEVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAV 558
+ +GRK ++ D+S+SR+HAE+ V T+ +++KD+ SK T +N +E +A + ++ G ++KVGTT+ ++ V L CA+ ++ + KA KA ++ G A +++W THLVT T K + AL L PVV+ WL D ++
Sbjct: 33 YLIGRKEGAIVLANDKSISRRHAELSV--------TDGRLFIKDLDSKFGTFINTQRLWNTEPTDAASLAESQPLLAEEPYGHPGGRRYAVPHGAKLKVGTTSFLVEHV---PLVVCASGVSGDAKATHKAACERLGAAQAKEWRE-DVTHLVT--PMMQWTPKFLYALGSLVPVVNPLWLHDASM 204
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Match: R1BFD2_EMIHU (FHA domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BFD2_EMIHU) HSP 1 Score: 62.8 bits (151), Expect = 1.110e-7 Identity = 61/205 (29.76%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 1 MWLLDVLDPKTGDVSTTVAMAEGIHTLGRKGSS-VSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGEANKEVSLKEGDEVKVGTTNSIMSRVRFQALRFCATQLTAEDKAELKALSKKCGG-AVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAVGGTAKPLRPVPETATFG 609
MWL+ G + V +EG +T+GR S+ V+ D+S+SRKH E+RVG + + + D+GSK T V+ S+ SL +G + +G + VR + L C + L+ D ++A + + G + S++W +HLV + +T KL+LAL PVV W++ +A A P+P+ + G
Sbjct: 1 MWLIADGSQTLGRLP--VPGSEGPYTVGRHESADVTVTGDKSISRKHLELRVGE------DGRTLRLTDLGSKFGTSVDNSKVDPGGT-ASLVDGASLSLGAK---VLTVRHEPLVLCYSGLSKADTEVVQAAAARLVGVSASKEWADGHTSHLVM--SKIKLTPKLMLALAHGCPVVAPAWVERVAARKAAA--EPLPDPSAVG 189 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig129.2189.1 >prot_E-fasciculatus_F_contig129.2189.1 ID=prot_E-fasciculatus_F_contig129.2189.1|Name=mRNA_E-fasciculatus_F_contig129.2189.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=255bp MWLLDVLDPKTGDVSTTVAMAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRback to top mRNA from alignment at E-fasciculatus_F_contig129:35133..38466+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig129.2189.1 ID=mRNA_E-fasciculatus_F_contig129.2189.1|Name=mRNA_E-fasciculatus_F_contig129.2189.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3334bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:35133..38466+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:35133..38466+ >mRNA_E-fasciculatus_F_contig129.2189.1 ID=mRNA_E-fasciculatus_F_contig129.2189.1|Name=mRNA_E-fasciculatus_F_contig129.2189.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1530bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:35133..38466+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |