mRNA_E-fasciculatus_F_contig129.2188.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI) HSP 1 Score: 374 bits (960), Expect = 3.890e-129 Identity = 225/249 (90.36%), Postives = 229/249 (91.97%), Query Frame = 1
Query: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADDGETDGAGAGAGDDAQGGKERVVNAAGGADAQRQQQSGAVPGGGETGAIATPTGMNVERQEPPSGLQXXXXXXXXXXXXXAVSTGLVPMDEDGGSHAAPAPAPAVPAAAGLGEGGVVG 747
MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGP+AAKKGEAGGDMMEEP+ADDGETDGAGAGAGDDAQGG++RVVNAAG ADA RQQQSGAVPGGGE GAIATPTGMNVERQEPPSGLQXXXXXXXXXXXX S GL PMDEDGGSHAAPA EGGVVG
Sbjct: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPEADDGETDGAGAGAGDDAQGGRDRVVNAAGSADAHRQQQSGAVPGGGEAGAIATPTGMNVERQEPPSGLQXXXXXXXXXXXX--ASAGLAPMDEDGGSHAAPAXXXXXXXXXXXXEGGVVG 247
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A6V1RK43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK) HSP 1 Score: 147 bits (372), Expect = 5.190e-41 Identity = 69/89 (77.53%), Postives = 82/89 (92.13%), Query Frame = 1
Query: 7 ENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLD 273
ENK PEFEPPQAC+QR++K+VLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+ DVM AI ELEF +L EPLK++L+
Sbjct: 30 ENKPPEFEPPQACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.250e-37 Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 13 KTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADDGETD 408
K PEFEPPQACVQR+IKS LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L PL+E+L YR++AS KK AA A AA E G ++ ADDGE D
Sbjct: 67 KLPEFEPPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAAATVASAPAAD-AELPGKKSDKAAADDGEDD 197
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.450e-34 Identity = 63/100 (63.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 7 ENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQ 306
ENK P+FEPP ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L PL+E+L YR++ +AKK+
Sbjct: 18 ENKMPDFEPPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKE 117
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S3HH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.120e-31 Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKK 303
MA+++ +FEPP ACV RV+K+ LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI QDVM A++EL F + E+PL+E+L+ Y++++ +K
Sbjct: 8 MADSRPQDFEPPMACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRK 108
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S2WSI8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.790e-28 Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPSAAKKGEAGGDMMEEPDADD 396
EFEPP ACV+R++KS LP + +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E L +L+Q+R+E K++ K A G +GEA G+ + D DD
Sbjct: 32 EFEPPLACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASGLR----KSEGEAAGNHSDGDDLDD 152
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S1UNS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNS2_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.850e-27 Identity = 53/99 (53.54%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 318
EFEPP AC++R++K LP + +GKDA AAF+R+ GIF++Y+TACANDF E +RQTI+A DV+ A+KEL+F E LK +L+ YR +K+++KAA
Sbjct: 19 EFEPPLACIRRILKHALPSSTNVGKDASAAFARACGIFVIYITACANDFAHENRRQTITANDVLAALKELDFDEFTPQLKTFLENYRAAEKSKREAKAA 117
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A7S1D791_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE) HSP 1 Score: 113 bits (283), Expect = 2.340e-27 Identity = 52/98 (53.06%), Postives = 77/98 (78.57%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 315
EFEPP ACV+R++K+ LP + +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E L+ +LD++R +K+ +KA
Sbjct: 31 EFEPPLACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKA 128
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: A0A6U9ZNZ1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZNZ1_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.500e-27 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 22 EFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 318
EFEPP ACV+R++K LP + +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E L +L++YR KK +KAA
Sbjct: 44 EFEPPVACVRRILKQTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFAPELSTFLERYRELEKNKKDAKAA 142
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Match: W7TTI8_9STRA (Dna polymerase epsilon subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTI8_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.760e-27 Identity = 53/87 (60.92%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 10 NKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYL 270
+K+PEFEPP + V ++I+ + D+VQ+GK+AKA F+R AGIFI+Y+TACANDF RE KR TI+A DV QA+KELEF ++ EPL+E+L
Sbjct: 79 SKSPEFEPPLSSVTKIIRRAVGDSVQVGKEAKATFTRVAGIFILYITACANDFSREGKRATITANDVYQALKELEFEDMVEPLQEFL 165 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig129.2188.1 >prot_E-fasciculatus_F_contig129.2188.1 ID=prot_E-fasciculatus_F_contig129.2188.1|Name=mRNA_E-fasciculatus_F_contig129.2188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=250bp MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTback to top mRNA from alignment at E-fasciculatus_F_contig129:32363..34920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig129.2188.1 ID=mRNA_E-fasciculatus_F_contig129.2188.1|Name=mRNA_E-fasciculatus_F_contig129.2188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2558bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:32363..34920- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:32363..34920- >mRNA_E-fasciculatus_F_contig129.2188.1 ID=mRNA_E-fasciculatus_F_contig129.2188.1|Name=mRNA_E-fasciculatus_F_contig129.2188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1500bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:32363..34920- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |