mRNA_E-fasciculatus_F_contig129.2187.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: D8LKB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKB5_ECTSI) HSP 1 Score: 1600 bits (4142), Expect = 0.000e+0 Identity = 859/1065 (80.66%), Postives = 910/1065 (85.45%), Query Frame = 3
Query: 432 RTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAALRHVGYSNAEATLMTDEDIIEAFPGVTVVPRDPLAPTSFGGAAEWLATKACEKKGAGSDSDDQCFSRVLAVGHSEGTRAMAGRKVPTPHCCIGIFKVNTSEKKLCTYEIHDLLSNTGKTLKPKGESPYARPTWTLTEEENRPRNDDEDDGGEVEALAARVAALSVNMKGPKPRAKKHHGATEGAQQRASTGRGVNSRKNSGARQDDEERHSSSRPTGLVRRLRGASKSLLSPAGTSKQPTGRRSGPQADRGNTAVP---EVSTQKPPRRSISKGTAVGLVGRGKGGGAASGGGECXXXXXXXXXPDSGSQKGSSTGTKKDYLVSGGRVSAGGGGKGVAPREGSLAGRGFRVAVCRSSRRRAVGGGSTFAGFLGVPVDVLCGSSGVLSFLSATELCTAQAICTSIAPATVNDYLWGELYARLPEGLRNRSKGVIPPVGESGITPVKAAARLHPKVLFTSAVSIASSMHAAKIARKVATAKRRVGVIHNLRGSVGAIRGDISVTINGKPVSVVQTTGAKTGAWVSRPSLVSEPSVNHNGVRTFSLSSSAKIDVPTSLETVTDLRSMCVALSWPDKDAALLPRIAVARFDERLILCPARALGTSVDKAIALYDVTGSSRNSSSSSERCGGHTCTKKTTPSSPVRRGCALLGVLPPGSEGGKRGSGTGAGGVAFLTVHFPHELLLDVATHGRRRVTGRSAPNSGSGTRGRYFGDDSAGPRHGLEGFATALGLRTAGIPLWEKASTAVDGRVCPPRNVVPQLQQSPVGDDPGAAVVCIDIMRPGASKAGSFGDGAAAVSDSDRTLSSGPGMPYSTPGGLSGTVADVLLADFTLYDPDGACLWAFTLPVVFAACPAGGSAPNPGGSRSRXXXXXXXXTVDMAHRELREERRRGIVAESGVGRVIVELALVESPSERDQNDVVGSSQRGSCPAGHMWVVRSARVELELEFVNTWFGTKHGSP 3617
RTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAG+HLKGLPFNRQQ+QPGSFDVV+TSPLVRAVQTAVC+SQSLGNLPLQVVPGLCSCTAALRH+GYS+AEATL+TDEDIIEAFPGVT+VPRDPLAPTSFGGAA WLA KACEK+GAGSD D +CFSRVLAVGH EGTRAMAGRKVPTPHCCIGIFKVN EKKLCTYEIHDLLSNTGK+LKPKGESPYARPT T+ EEE+RPRN+ ED GGEVEALAARVAAL+VNMKGPKPRAK H GA E AQ+RASTGRG NSR+N Q+D++R SSSRPTGL+RRLRGASKSLLS A E+STQK RRS KGTAVG+VG XXXXXXXXX K LVSGG VSA GGGK VAPREGSLAGRGFRVAV RSSRRRAVGGGSTFAGFLGVPVDVLCGSSGVLSFLS TELCTAQAICTSIAPAT+N+YLWGELYARLPEGL+NRSKGV+P GES I P KAAA +HPKVLF AVSIASSMHAAKIA+KVAT KRRVGVI+NLR SV A+RGDISVTINGK VSVVQTTGAKTGAWVSRP++VSEPSVNHNGVRTFSLSSSAKIDVPTSLETV DLRSMCVALSWP K+A LLPRI VAR DER +L PARALG SVD AI LYD+TGSS HTCT +TTPSSPVRRGCALLGVLP GS GG+R SGT GGVAFLTVHFPHELLLDVATHG RR T R+ P+ GS TRGRY GDDSAGP HGLEGFATALGLRTAG+PLWEKASTAVDGRVCPPRNV PQLQQSPVGDDPGAAVV IDI+ PGA+ A SFG GAAAVSD DRTLSSGPG+PY TPGGLSGTVADVLLADFTLYDPDGA +WAFTLP+VFAACPA GSAPNPGGS XXXXX T+DMA RELREERRRGIV ESGVGRVIVELALVESP+ERD+NDVVGSSQ+ SCPAGHMWVVRSARVEL+L FVNTWFGTKHGSP
Sbjct: 2 RTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGQHLKGLPFNRQQKQPGSFDVVFTSPLVRAVQTAVCISQSLGNLPLQVVPGLCSCTAALRHIGYSSAEATLLTDEDIIEAFPGVTIVPRDPLAPTSFGGAASWLAAKACEKQGAGSDGDGECFSRVLAVGHREGTRAMAGRKVPTPHCCIGIFKVNAPEKKLCTYEIHDLLSNTGKSLKPKGESPYARPTSTMMEEESRPRNEHEDGGGEVEALAARVAALTVNMKGPKPRAKNHSGAKEDAQRRASTGRGANSRENXXXXQNDQDRRSSSRPTGLMRRLRGASKSLLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXEISTQKSTRRSTGKGTAVGVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKGDLVSGGPVSAAGGGKNVAPREGSLAGRGFRVAVHRSSRRRAVGGGSTFAGFLGVPVDVLCGSSGVLSFLSPTELCTAQAICTSIAPATMNEYLWGELYARLPEGLKNRSKGVLPAGGESEIYPEKAAAHVHPKVLFAIAVSIASSMHAAKIAKKVATVKRRVGVIYNLRVSVVAMRGDISVTINGKSVSVVQTTGAKTGAWVSRPNIVSEPSVNHNGVRTFSLSSSAKIDVPTSLETVKDLRSMCVALSWPGKEATLLPRIVVARIDERPVLSPARALGKSVDNAIVLYDITGSSXXXXXXXXXXXXHTCTTRTTPSSPVRRGCALLGVLPSGSHGGQRDSGTDDGGVAFLTVHFPHELLLDVATHGPRRATERNVPSGGSSTRGRYLGDDSAGPGHGLEGFATALGLRTAGVPLWEKASTAVDGRVCPPRNVAPQLQQSPVGDDPGAAVVRIDILHPGANNAASFGGGAAAVSDPDRTLSSGPGVPYYTPGGLSGTVADVLLADFTLYDPDGASIWAFTLPIVFAACPAEGSAPNPGGSSXXXXXXX---TIDMARRELREERRRGIVTESGVGRVIVELALVESPTERDENDVVGSSQKRSCPAGHMWVVRSARVELDLGFVNTWFGTKHGSP 1063
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: D8LKB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB9_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 1.530e-163 Identity = 243/309 (78.64%), Postives = 265/309 (85.76%), Query Frame = 3
Query: 348 MSSEATAXXXXXXAKPDQRVGVGSVPSGRTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAALRHVGYSNAEATLMTDEDIIEAFPGVTVVPRDPLAPTSFGGAAEWLATKACEKKGAGSDSDDQCFSRVLAVGHSEGTRAMAGRKVPTPHCCIGIFKVNTSEKKLCTYEIHDLLSNTGKTLKPKGESPYARPTWTLTEEENRPRNDDEDDGGEVEALAARVAALSVNMKGPK 1274
MSSEAT AKPD+RV VGSV S RTNEVWHVRHGERCDEV GEE++AWE+SPRC GGWFDPFLT GHVQACRAGEHLKGLPFNRQQ+QPGSFD+VYTSPL+RAVQTAVC+SQSLGNLPLQVVPGLCSCTAAL +GYS+AEATLMTD+DIIEAFPGVT+VP DPLAPTSF GAAEWLA KACEKKGAGSD D +CFSRVLAVGH EGT+ MA + VPTP+CCIGIFKV E+ YE+HDLL NTG++LK GES YARP +EEENRPRNDDED GEVEALAAR+AALS NMKGPK
Sbjct: 1 MSSEATVAAAAAAAKPDRRVRVGSVQSKRTNEVWHVRHGERCDEVWGEEQQAWERSPRCNEGGWFDPFLTRDGHVQACRAGEHLKGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSEIGYSSAEATLMTDKDIIEAFPGVTIVPTDPLAPTSFEGAAEWLAAKACEKKGAGSDGDGECFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVKAEEENWYPYELHDLLINTGESLKSSGESAYARPKVATSEEENRPRNDDEDGDGEVEALAARIAALSDNMKGPK 309
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: A0A6H5KYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV6_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.680e-65 Identity = 155/305 (50.82%), Postives = 181/305 (59.34%), Query Frame = 3
Query: 426 SGRTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNR--------QQEQPGS-FDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAAL-RHVGYSNAEATLMTDEDIIEAFPGVTVVPRDPLAPTSFGGAAEWLATKACEKKGAGSDSDDQCFSRVLAVGHSEGTRAMAGRKVPTPHCCIGIFKVNTSEKK----LCTYEIHDLLSNTGKTLKPKGESP--YARP--TWTLTEEENRPRNDDEDDGGEVEALAARVAALSVNMKGPKPRAK 1286
+G NEVWHVRHG+ P K FDP LT GHVQA AG +L LPFNR QQ+QPG FDVVYTSPL RAVQTAVC+S +LG LPL+VVPGLCS TAAL R G+ + EA LMTD DI EAFPGV V PRDPLAPT+F GA WLA KACE A V EG + VPTPHCCIG+F+V + + YE+HDLL++TG++L P G P YARP T T E+ + + DDG EALAARV AL+V+ +G K AK
Sbjct: 146 AGVVNEVWHVRHGK----------------PGRKTLEIFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRQPQQQQPGEGFDVVYTSPLARAVQTAVCLSWALGGLPLEVVPGLCSSTAALVRRGGFPSVEAELMTDGDIAEAFPGVVVRPRDPLAPTTFDGALAWLAAKACEGTTA----------MVANSSVGEGKEEV----VPTPHCCIGVFRVAEAGEGGGGGTWAYELHDLLASTGESLGPWGGEPSSYARPLRTAAATPEDGKNGSRSGDDGAAAEALAARVMALTVHTEGSKRGAK 420
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: D8LIR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR2_ECTSI) HSP 1 Score: 165 bits (418), Expect = 2.800e-38 Identity = 125/301 (41.53%), Postives = 152/301 (50.50%), Query Frame = 3
Query: 429 GRTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNR---------QQEQPGS-FDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAAL-RHVGYSNAEATLMTDEDIIEAFPGVTVVPRDPLAPTSFGGAAEWLATKACEKKGAGSDSDDQCFSRVLAVGHSEGTRAMAGRKVPTPHCCIGIFKVNTSEKKLCTYEIHDLLSNTGKTLKPKGESP--YARPTWTL--TEEENRPRNDDEDDGGEVEALAARVAALSVNMKGPKPRAK 1286
G +EVWHVRHG+ P K FDP LT GHVQA AG +L LPFNR QQ+ PG FDVVYTSPL RAVQTAVC+S++LG+LPL+VVPGLCSCTAAL R G+ + EA LMTD DI EAFPGV AV H++ G + G + YE+HDLL++TGK+L P+G P YARP T+ T E+ + + DDG EALAARV AL+V+ + K AK
Sbjct: 151 GVVSEVWHVRHGK----------------PGRKTLEIFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRRQPQQQLPGEGFDVVYTSPLARAVQTAVCLSRALGDLPLEVVPGLCSCTAALVRRGGFPSVEAELMTDGDIAEAFPGV-------------------------------------------AVRHNQREGERRGGR--------GAW----------AYELHDLLASTGKSLGPRGGEPSSYARPLGTVAATPEDGENGSWNGDDGPAAEALAARVMALTVHTERSKLGAK 374
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: A0A6H5JYI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI4_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.130e-26 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query: 486 GEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTS 662
GEE++AWE+SPRCKA GWFDPFLT GH+Q CRAGEHLKGLPFNRQQ+QPGSFD+V S
Sbjct: 17 GEEQQAWERSPRCKASGWFDPFLTRDGHLQVCRAGEHLKGLPFNRQQKQPGSFDIVRPS 75
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: A0A7S2GED0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GED0_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 8.790e-17 Identity = 80/216 (37.04%), Postives = 100/216 (46.30%), Query Frame = 3
Query: 441 EVWHVRHGERCDEVRGEERRAWEKS-PRCKAGG-WFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAALRHVGYSNAEA--TLMTDEDIIEAFPGVT-VVPRDPLAPTSFGGAAEWLATKACEKKGAGSDSDDQCFSRVLAVGHSEGTRAMAGRKVP---------TPHCCIGIF 1046
EV+ VRHGER DEV GEERR W S +C G FDP LT +G QA A L+ L QP FDVV+ SPLVR VQTA + + G +P+ +VPGL C AAL H S L E + P + VP P F A + + RVL + H E R++A R+ TP+ CIG+F
Sbjct: 282 EVYIVRHGERVDEVDGEERRRWITSLEQCADGNDGFDPPLTIHGVAQAADAARSLRAL-----LPQPKPFDVVFCSPLVRCVQTAEHFAYTFG-IPITLVPGLGECCAALHHRSRSAKRRWPLLQPLEQLRVLCPRASFTVPDIASLPERFEDGPLTCAGSLAQGR-----------RRVLLISHRESIRSLAKRQQSKDRKSDDRNTPYACIGLF 480
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: A0A0G4GIZ6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GIZ6_9ALVE) HSP 1 Score: 77.0 bits (188), Expect = 2.810e-11 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 3
Query: 444 VWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAAL 764
+W VRH ER DE R E AW+ C WFDP LT GH A E LK + Q +FD VYTSP++R++QTA +++ LG + +QVV GL +CTAAL
Sbjct: 31 LWIVRHAERMDEAREE---AWKWREVC-GERWFDPPLTDKGHEMARNCAEVLKEIA----TAQGVTFDAVYTSPMMRSLQTADPLARVLG-VDVQVVSGLAACTAAL 128
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: F2UER2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UER2_SALR5) HSP 1 Score: 73.6 bits (179), Expect = 1.380e-9 Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 3
Query: 444 VWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLCSCTAALRH 770
V+ +RH ER + + EE W KS R +DP +T G QA A HL+ R EQP F +Y+SPL+R +QTAV V+ LG +P+++V GL +CT ALR+
Sbjct: 127 VYLLRHAERAENM--EEHETWLKSGRV-----YDPPITERGRQQALTASAHLQ----QRHAEQP--FACIYSSPLMRCMQTAVIVADHLG-IPIRIVQGLAACTRALRN 221
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Match: A0A7S3KS85_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KS85_EUPCR) HSP 1 Score: 56.2 bits (134), Expect = 5.680e-5 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 3
Query: 426 SGRTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGEHLKGLPFNRQQEQPGSFDVVYTSPLVRAVQTAVCVSQSLGNLPLQVVPGLC 746
S RT ++ +RHGER D W + G D LTS GHVQA + G+++K +++ + +F V Y+SPLVR +QT+ VS++L N +++ G+C
Sbjct: 7 SRRTKYLFFMRHGERSD---------WSGKKVKRRG---DTTLTSQGHVQAYQTGKYIKKFLKDKEIK---NFRV-YSSPLVRTIQTSCEVSKALKNSSIKIFNGIC 97 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig129.2187.1 >prot_E-fasciculatus_F_contig129.2187.1 ID=prot_E-fasciculatus_F_contig129.2187.1|Name=mRNA_E-fasciculatus_F_contig129.2187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1091bp MSSEATAAAAAAAAKPDQRVGVGSVPSGRTNEVWHVRHGERCDEVRGEERback to top mRNA from alignment at E-fasciculatus_F_contig129:27419..31661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig129.2187.1 ID=mRNA_E-fasciculatus_F_contig129.2187.1|Name=mRNA_E-fasciculatus_F_contig129.2187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4243bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:27419..31661+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:27419..31661+ >mRNA_E-fasciculatus_F_contig129.2187.1 ID=mRNA_E-fasciculatus_F_contig129.2187.1|Name=mRNA_E-fasciculatus_F_contig129.2187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6546bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:27419..31661+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |