mRNA_E-fasciculatus_F_contig129.2186.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2186.1 vs. uniprot
Match: D8LKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB6_ECTSI) HSP 1 Score: 1335 bits (3456), Expect = 0.000e+0 Identity = 755/854 (88.41%), Postives = 771/854 (90.28%), Query Frame = 1
Query: 1 QASVLLNPNNGGRKLFGYSDADLTTGMIQMSRVALTSRTVDRMQIICTRNKRLSTSPGMRHNVTGEGGQRGVSGGGAGTSGAAGSGEDRHGPTGGATXXXRQGAQTAPGGSGSGPGSTKHGRSGPGGVAMTDDGEGGEGTEEARXXXXWXXXXXGSGHHDGVIEDNDHSQTLKIKAAQALFRMSLEPGGEVLAFLVNGVKTRDPTTLSNVATALCRCTYEARNHERLVTEFNAAQSLCYIMQRHTANLKIIGAKGMLNMCGLSSTLPSLAAKLDVYMLTLCSAMEDLARNESEAVQVKLNVKRPGNLAYLASASVNLADLKSAHAQLVKQKDMVTVLCLLSEQPKLVENVSRAHPVSESSVTSWLALEADSASPDGRLACLSAIEHLIRNQEEVDTPLLRAGLMGTLHAILDEPIAAAAKATEQAQEAGTLEASASSLLSCGSGTAIAAAGTATTRASVVMPPIVSPSDSTSAISKSGAERPSSPRSGAVXXXXXXXXXXXLDTKKIVAMTQNAKKNRERLLRSSPDVLDRILAVVTKTCFSMTLRGRNRPRLVQHGLPALCGKVMKASFLTKDENIKFMAAACIFSLAQSVDLCSDIAESGAADLALEDLANGGQPGQNGQEESEFLLAQLAIVAQVAVEPRFCRRMASAKMIDLLMTLALGDTPDKKAEDGRPRPDAEWTNNGSGGXXXXXSPNTSGREGSGGGDTAVDGGG-KGGVRSNGIGSPRPQRPGRPTKGKRFSGERVKVATPYVGALRYCVVTIVERVGSILNDDGEYERASSPSEMTSMVKKLVYLVCSAVLTSGPDEALMGRCARVMADWSSEATFAKEMGVKEEAGKSLAVLMRSVSPKTKA 2559
QASVLLNPNNGGRKLFGYSDADLTTGMIQMSRV LTSRTVDRMQIIC RNKRLSTSPGMR NV+G+GGQRG TSG AGSGEDRHGP GGA XXX QTAPGGSGSGPGSTKHGRS PGGVAMTDDGEGGEGTEE XXXX XXXXX VIEDNDHSQ LKIKAAQALFRMSLEPGGEVLAFLVNGVKTRDP TLSNVATALCRCTYEARNHERLVTEFNAAQ+LCYIMQRHT NLKIIGAKGMLNMCGLSSTLPSLAAKLDVYMLTLCSAMEDLARNESEAVQVKLN+KRPGNLAYLASASVNLADLKSAHAQLVKQKD+VTVLCLLSEQPKLVENVSRAHPVSESSVTSWLALEADSASPDGRLACLSAIEHLIRNQEEVDTPLLRAGLMGTLHAILDEPIAAA KATEQAQEAG LEAS SLL SG+AIAAAG+ATTR SVV PPI S SDSTSAI KSGAERPSSPRSG LD KKIVAMTQ +KKNRERLLRSSPDVLDRILAVVTKTCFSMTLRGRNRPRLVQHGLPALCGKVMK LTKDENIKFMAAACIFSLAQS DLCSDIAESGAADLALEDLANGGQPGQNGQEESEFLLAQLAIVAQVAVEPRFCRRMASAKMIDLLMTLALG+ PDKKAE GRPRPDAE TN+GSG +PNTSGREGSG G+T +DGGG KGGVRS+GIGSPRPQR G P KGKRFSGERVKVATPYVGALRYCVV IVERVG+ILN DGEY RASSPSEMTSMVKKLVYLVCSAVLTSGPDEALM RCARVMADWSSEA FAKEMGVKE AGKSLAVLMRSVSPKTK+
Sbjct: 3 QASVLLNPNNGGRKLFGYSDADLTTGMIQMSRVGLTSRTVDRMQIICNRNKRLSTSPGMRQNVSGDGGQRGXXXXXXXTSGVAGSGEDRHGPMGGAXXXXXXXXQTAPGGSGSGPGSTKHGRSAPGGVAMTDDGEGGEGTEETXXXXXXXXXXXXXXXXXXVIEDNDHSQILKIKAAQALFRMSLEPGGEVLAFLVNGVKTRDPITLSNVATALCRCTYEARNHERLVTEFNAAQALCYIMQRHTTNLKIIGAKGMLNMCGLSSTLPSLAAKLDVYMLTLCSAMEDLARNESEAVQVKLNLKRPGNLAYLASASVNLADLKSAHAQLVKQKDIVTVLCLLSEQPKLVENVSRAHPVSESSVTSWLALEADSASPDGRLACLSAIEHLIRNQEEVDTPLLRAGLMGTLHAILDEPIAAAEKATEQAQEAGILEASEPSLLPSASGSAIAAAGSATTRGSVVTPPIASSSDSTSAIGKSGAERPSSPRSGVAVTGGGGRGVEVLDAKKIVAMTQTSKKNRERLLRSSPDVLDRILAVVTKTCFSMTLRGRNRPRLVQHGLPALCGKVMK---LTKDENIKFMAAACIFSLAQSADLCSDIAESGAADLALEDLANGGQPGQNGQEESEFLLAQLAIVAQVAVEPRFCRRMASAKMIDLLMTLALGNAPDKKAEHGRPRPDAEGTNDGSGRSGGSGAPNTSGREGSGXGNTVIDGGGGKGGVRSDGIGSPRPQRSGWPMKGKRFSGERVKVATPYVGALRYCVVAIVERVGTILNADGEYGRASSPSEMTSMVKKLVYLVCSAVLTSGPDEALMARCARVMADWSSEAKFAKEMGVKEAAGKSLAVLMRSVSPKTKS 853 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig129.2186.1 >prot_E-fasciculatus_F_contig129.2186.1 ID=prot_E-fasciculatus_F_contig129.2186.1|Name=mRNA_E-fasciculatus_F_contig129.2186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=856bp QASVLLNPNNGGRKLFGYSDADLTTGMIQMSRVALTSRTVDRMQIICTRNback to top mRNA from alignment at E-fasciculatus_F_contig129:17093..25505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig129.2186.1 ID=mRNA_E-fasciculatus_F_contig129.2186.1|Name=mRNA_E-fasciculatus_F_contig129.2186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8413bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:17093..25505- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:17093..25505- >mRNA_E-fasciculatus_F_contig129.2186.1 ID=mRNA_E-fasciculatus_F_contig129.2186.1|Name=mRNA_E-fasciculatus_F_contig129.2186.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5136bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:17093..25505- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |