prot_E-fasciculatus_F_contig12891.2182.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig12891.2182.1
Unique Name	prot_E-fasciculatus_F_contig12891.2182.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	164

Homology

[Close]

BLAST of mRNA_E-fasciculatus_F_contig12891.2182.1 vs. uniprot
Match: D7G4S5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S5_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 5.920e-89
Identity = 136/162 (83.95%), Postives = 146/162 (90.12%), Query Frame = 0

Query:    1 LWSCVGSVASLGVWLKSPDRSVSSLVLRQWPRFAGVGGAAGVVLTLPMMYHKMKTVDLDGLEDRAYRIALNRGVQTVDFYSAIGGVISLVLGLSTRRISAGQAKAGIARAVSPWSLMAQGIAAGSVGFVLGKVSGLPVQRPLELLNARGFEADGDDDGAERK 162
            LWS VGSVASLGVWL SPDRSVSSLVL+QWPRFAG+GG AGV++T+PMM  KM+TVDLDGLEDR YRIALN+GVQTVDFY AIGGV+SLVLGLSTRRI  GQAKAGIAR VSPWSLMAQGIAAGSVGFVLGK  GLP++RPLELLNARGFEAD D  G ERK
Sbjct:   42 LWSTVGSVASLGVWLNSPDRSVSSLVLKQWPRFAGLGGGAGVIMTVPMMCFKMQTVDLDGLEDRTYRIALNKGVQTVDFYGAIGGVMSLVLGLSTRRIGGGQAKAGIARVVSPWSLMAQGIAAGSVGFVLGKAVGLPMERPLELLNARGFEADRDVGGVERK 203

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig12891.2182.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig12891.2182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G4S5_ECTSI	5.920e-89	83.95	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..50
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..163
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig12891	contig	E-fasciculatus_F_contig12891:119..2643 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig12891.2182.1	mRNA_E-fasciculatus_F_contig12891.2182.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig12891 119..2643 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig12891.2182.1 ID=prot_E-fasciculatus_F_contig12891.2182.1|Name=mRNA_E-fasciculatus_F_contig12891.2182.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp
LWSCVGSVASLGVWLKSPDRSVSSLVLRQWPRFAGVGGAAGVVLTLPMMY
HKMKTVDLDGLEDRAYRIALNRGVQTVDFYSAIGGVISLVLGLSTRRISA
GQAKAGIARAVSPWSLMAQGIAAGSVGFVLGKVSGLPVQRPLELLNARGF
EADGDDDGAERKS*