mRNA_E-fasciculatus_F_contig12890.2181.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12890.2181.1
Unique NamemRNA_E-fasciculatus_F_contig12890.2181.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.260e-130
Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 1 
Query:  307 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKPQRACHTMPESPLRGP 903
            MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKA KEGEGP QEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSS KQ KK QRACHTMPESPLRGP
Sbjct:    1 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQLKKRQRACHTMPESPLRGP 199
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.280e-126
Identity = 205/255 (80.39%), Postives = 208/255 (81.57%), Query Frame = 1 
Query:  181 DATVLRGGKAGRGGPXXXXXXXXXXSVAVSTALAGTRRAGGGMGGG--------------YTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKPQRACHTMPESPLRGP 903
            DATVL G KAG+GG           SVA+S                              YTYEDYVALATGLQAGAPERQREVVRG XXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVD+KA KEGEGP QEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSS KQPKKPQRACHTMPESPLRGP
Sbjct:  297 DATVLGGEKAGQGGAGAANGGGGNGSVALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTYEDYVALATGLQAGAPERQREVVRGVXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDIKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSNKQPKKPQRACHTMPESPLRGP 551
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A835ZB75_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB75_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.270e-58
Identity = 99/191 (51.83%), Postives = 120/191 (62.83%), Query Frame = 1 
Query:  325 YEDYVALATGLQAGAPER--QREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKPQRACHTMPESP 891
            Y+ ++ LA G+Q   P+   QR V+ G             YR + PPSKFSAE+NA MC  L  WLVG S +T   V V       G   EVWR  VKVERCRYLEAS+CKG CMNLCK+PTE FFRE+LGMPL + P+F+DLSC F FG +  P  EDPL+ EPC+ +C +S     +  RACHTMPE P
Sbjct:   24 YDTFIVLARGIQLKFPDPADQRAVIAGMLRDALPAWMLHAYRFVSPPSKFSAELNAVMCAILSDWLVGPSTVTTAEVPVA------GGGTEVWRAAVKVERCRYLEASRCKGACMNLCKVPTETFFREELGMPLTLVPDFDDLSCTFTFGVEPAPLAEDPLVVEPCYYQCPASSAAYARSGRACHTMPELP 208
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A2V0P9C6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9C6_9CHLO)

HSP 1 Score: 151 bits (381), Expect = 1.740e-40
Identity = 80/176 (45.45%), Postives = 107/176 (60.80%), Query Frame = 1 
Query:  325 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQ-EVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQ 846
            YED+V+++  +  G   + QREVVR              +R LFPP+++SAE NA +    F WLVG+SEL E  V V       GP Q    R+ V +++CRYLE+S C G C N+CK+PT+AFF E+ G+PL M PNFEDLSCE  FGQ   P EEDP+ ++PC+    S  K+
Sbjct:   86 YEDFVSISKEIMRGRGSDAQREVVREVLRNLMPREAPGAFRRLFPPTQWSAEFNALIASMAFFWLVGESELREADVVV-------GPGQVRRQRSVVYIKKCRYLESSGCVGMCTNMCKVPTQAFFTEEFGLPLTMNPNFEDLSCEMIFGQAPPPVEEDPVYQQPCFIPQCSLAKR 254
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: W1PM95_AMBTC (D27-like_C domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PM95_AMBTC)

HSP 1 Score: 150 bits (378), Expect = 3.820e-40
Identity = 78/199 (39.20%), Postives = 115/199 (57.79%), Query Frame = 1 
Query:  265 VSTALAGTRRAGGGMGGGYTYEDYVALA-TGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKP 858
             +++  G ++ GGG+   Y YE +V ++ T +Q  + ++Q+EVVR              +R LFPP+K++AE NA +  P F WLVG S++ E  V+V   K+  G         V + +CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SC+  +GQ   P EEDP+  +PC+     S   P  P
Sbjct:   71 AASSSGGEKKRGGGL---YDYEGFVGVSKTVMQGRSRKQQQEVVREVLLSMLPPGAPAKFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVVE--VEVNGVKQKSG---------VHITKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCDMVYGQAPPPFEEDPVSTQPCYANISGSIANPSSP 255
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A835Q041_VANPL (D27-like_C domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q041_VANPL)

HSP 1 Score: 147 bits (371), Expect = 5.410e-39
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 1 
Query:  319 YTYEDYVALATGLQAGAPERQRE-VVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKPQRACHTM 879
            + YE +V ++  +  G   +Q+E VVR              +R LFPP+K++AE NA +  P F WLVG SE+ E  V+V  TK+         R+ V +++CRYLE S C G C+N+CKLPT+ FF  + G+PL M PNFED+SC+  +GQ   P EEDP+ ++PC++   S G  P  P   CH +
Sbjct:   97 WDYESFVDVSKRVMVGRSRKQQEEVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVIE--VEVNGTKQ---------RSGVHIKKCRYLENSGCVGMCVNMCKLPTQDFFTNEFGLPLTMNPNFEDMSCDMVYGQPPPPFEEDPVSKQPCYSNICSLGN-PNSP--VCHKL 270
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: I6PEW1_CHAGL (Putative D27 family protein n=1 Tax=Chaetosphaeridium globosum TaxID=96477 RepID=I6PEW1_CHAGL)

HSP 1 Score: 146 bits (368), Expect = 1.540e-38
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 1 
Query:  325 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLS 834
            YE +V ++  +  G +P  Q+  VR              +R LFPP+K SAE+NA++  P F WLVG ++L E  V+V   K+  G         VK+E+CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SCE  +GQ A P EEDP  ++PC+    S
Sbjct:  100 YEGFVDISKRVMQGRSPAEQQASVRRVLLSMLPPEAPASFRKLFPPTKLSAEINAWITVPFFAWLVGPAKLYE--VEVNGVKQWSG---------VKIEKCRYLENSGCVGMCVNMCKVPTQDFFTNEFGLPLTMTPNFEDMSCEMVYGQLAPPVEEDPAYKQPCFAALCS 259
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BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A0D2N974_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N974_9CHLO)

HSP 1 Score: 146 bits (369), Expect = 1.570e-38
Identity = 77/175 (44.00%), Postives = 103/175 (58.86%), Query Frame = 1 
Query:  325 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQ 846
            Y+D+V ++  +  G +  +QREVVR              +R LFPP+++SAE NA +    F WLVG+SEL E  V V   K     S       V +++CRYLEAS C G C N+CK+PT+A+F E+ G+PL M PNFEDLSCE  FGQ   P E+DP+  +PC+    S  KQ
Sbjct:   17 YDDFVRISKEIMRGRSAVKQREVVREVLRSLMPREAPGAFRRLFPPTQWSAEFNALIASVAFFWLVGESELREADVQVAEDKVRRQKS------LVYIKKCRYLEASGCVGMCTNMCKVPTQAYFTEEFGLPLTMKPNFEDLSCEMIFGQAPPPLEQDPVYTQPCFVPQCSLAKQ 185
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: A0A835PDA4_VANPL (D27-like_C domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PDA4_VANPL)

HSP 1 Score: 147 bits (371), Expect = 4.060e-38
Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 1 
Query:  319 YTYEDYVALATGLQAGAPERQRE-VVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSGKQPKKPQRACHTM 879
            + YE +V ++  +  G   +Q+E VVR              +R LFPP+K++AE NA +  P F WLVG SE+ E  V+V  TK+         R+ V +++CRYLE S C G C+N+CKLPT+ FF  + G+PL M PNFED+SC+  +GQ   P EEDP+ ++PC++   S G  P  P   CH +
Sbjct:  182 WDYESFVDVSKRVMVGRSRKQQEEVVREVLLSMLPSGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVIE--VEVNGTKQ---------RSGVHIKKCRYLENSGCVGMCVNMCKLPTQDFFTNEFGLPLTMNPNFEDMSCDMVYGQPPPPFEEDPVSKQPCYSNICSLGN-PNSP--VCHKL 355
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Match: W9RMK3_9ROSA (D27-like_C domain-containing protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RMK3_9ROSA)

HSP 1 Score: 141 bits (355), Expect = 1.600e-37
Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 1 
Query:  319 YTYEDYVALATGLQAGAPE-RQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLS 834
            Y YE +V ++  +  G    +Q+EVVR              +R LFPP+K++AE NA +  P F WLVG SE+ E  V+V   K+         R+ V +++CRYLE S C G C+N+CK+PT+ FF  + G+PL M P FED+SCE  +GQ   P EEDP+ ++PC++E  S
Sbjct:   21 YDYESFVDVSKRVMQGRSRMQQQEVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVIE--VEVNGEKQ---------RSGVHIKKCRYLEESGCVGMCVNMCKIPTQDFFTNEFGLPLTMIPKFEDMSCEMVYGQVPPPFEEDPVAKQPCFSEICS 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12890.2181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK55_ECTSI2.260e-13097.49D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L107_9PHAE1.280e-12680.39D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A835ZB75_9STRA2.270e-5851.83D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A2V0P9C6_9CHLO1.740e-4045.45D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
W1PM95_AMBTC3.820e-4039.20D27-like_C domain-containing protein n=3 Tax=Ambor... [more]
A0A835Q041_VANPL5.410e-3940.96D27-like_C domain-containing protein n=1 Tax=Vanil... [more]
I6PEW1_CHAGL1.540e-3843.27Putative D27 family protein n=1 Tax=Chaetosphaerid... [more]
A0A0D2N974_9CHLO1.570e-3844.00D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A835PDA4_VANPL4.060e-3840.96D27-like_C domain-containing protein n=1 Tax=Vanil... [more]
W9RMK3_9ROSA1.600e-3741.62D27-like_C domain-containing protein n=2 Tax=Morus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12890contigE-fasciculatus_F_contig12890:3..3803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.8
Seed ortholog evalue1.2e-102
Seed eggNOG ortholog2880.D7FK55
EggNOG free text desc.Domain of unknown function (DUF4033)
EggNOG OGs2CN5C@1,2QTYT@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF4033
Ec32 orthologEc-04_005770.1
Exons5
Model size906
Cds size879
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12890.2181.1prot_E-fasciculatus_F_contig12890.2181.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12890 30..3803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.3760905-UTR-E-fasciculatus_F_contig12890:2..291622927792.3760905-UTR-E-fasciculatus_F_contig12890:2..29Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12890 3..29 +
1695995696.8290365-UTR-E-fasciculatus_F_contig12890:2..291695995696.8290365-UTR-E-fasciculatus_F_contig12890:2..29Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12890 3..29 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.390723-CDS-E-fasciculatus_F_contig12890:29..4671622927792.390723-CDS-E-fasciculatus_F_contig12890:29..467Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 30..467 +
1695995696.842568-CDS-E-fasciculatus_F_contig12890:29..4671695995696.842568-CDS-E-fasciculatus_F_contig12890:29..467Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 30..467 +
1622927792.4026523-CDS-E-fasciculatus_F_contig12890:1444..15371622927792.4026523-CDS-E-fasciculatus_F_contig12890:1444..1537Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 1445..1537 +
1695995696.8514442-CDS-E-fasciculatus_F_contig12890:1444..15371695995696.8514442-CDS-E-fasciculatus_F_contig12890:1444..1537Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 1445..1537 +
1622927792.4153953-CDS-E-fasciculatus_F_contig12890:2302..24531622927792.4153953-CDS-E-fasciculatus_F_contig12890:2302..2453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 2303..2453 +
1695995696.8624885-CDS-E-fasciculatus_F_contig12890:2302..24531695995696.8624885-CDS-E-fasciculatus_F_contig12890:2302..2453Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 2303..2453 +
1622927792.4274256-CDS-E-fasciculatus_F_contig12890:3072..31731622927792.4274256-CDS-E-fasciculatus_F_contig12890:3072..3173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 3073..3173 +
1695995696.8722737-CDS-E-fasciculatus_F_contig12890:3072..31731695995696.8722737-CDS-E-fasciculatus_F_contig12890:3072..3173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 3073..3173 +
1622927792.4415398-CDS-E-fasciculatus_F_contig12890:3707..38031622927792.4415398-CDS-E-fasciculatus_F_contig12890:3707..3803Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 3708..3803 +
1695995696.8832192-CDS-E-fasciculatus_F_contig12890:3707..38031695995696.8832192-CDS-E-fasciculatus_F_contig12890:3707..3803Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12890 3708..3803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12890.2181.1

>prot_E-fasciculatus_F_contig12890.2181.1 ID=prot_E-fasciculatus_F_contig12890.2181.1|Name=mRNA_E-fasciculatus_F_contig12890.2181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=293bp
MSAAVEAEAAIRAKGNNDNDGRTAIAAGGGGDGAGSPAGEPALAAAAAAA
ADATVLRGGKAGRGGPGAANGSGGNGSVAVSTALAGTRRAGGGMGGGYTY
EDYVALATGLQAGAPERQREVVRGVLRSVFPAWFPAFYRMLFPPSKFSAE
VNAFMCPPLFGWLVGKSELTEGVVDVKATKEGEGPSQEVWRNTVKVERCR
YLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDA
LPAEEDPLMREPCWTECLSSGKQPKKPQRACHTMPESPLRGP*
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mRNA from alignment at E-fasciculatus_F_contig12890:3..3803+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12890.2181.1 ID=mRNA_E-fasciculatus_F_contig12890.2181.1|Name=mRNA_E-fasciculatus_F_contig12890.2181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3801bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12890:3..3803+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGTGGATCAACCTCCTGAGCAGCCGAATGTCCGCTGCGGTAGAGGCGGA
GGCGGCGATCCGCGCCAAGGGCAACAACGACAACGACGGGAGAACCGCGA
TCGCGGCCGGCGGCGGCGGTGATGGTGCCGGTTCTCCTGCGGGCGAACCG
GCGTTAGCAGCAGCAGCAGCAGCAGCAGCAGATGCCACGGTGCTGCGAGG
GGGAAAAGCTGGGCGGGGCGGGCCGGGGGCGGCGAACGGCAGCGGGGGCA
ACGGTAGCGTTGCGGTATCGACAGCATTGGCGGGGACACGGAGGGCCGGC
GGCGGGATGGGGGGGGGGTACACGTACGAGGACTACGTCGCCCTGGCGAC
CGGACTGCAGGCCGGCGCGCCCGAGAGGCAGAGGGAGGTGGTGCGGGGGG
TCCTGCGATCGGTCTTCCCGGCGTGGTTCCCGGCGTTCTATCGCATGCTT
TTCCCTCCGAGCAAGGTGTGTTTTCGAGGCCATGTGTAAACAACTATGTA
AGGGTATTTTTTTCCTCCAAGCATGGCGTGTGATAGACCGCATGTTTAAA
CGTCTACCAGCAATGGTTTTCCCTCCACACAAGGCTTGTTTTTAGGCCAT
GCTTAAGCAACTGAGAGTATTTCCCCTCCAAGCATGATGTGTTTTCGAGG
GCAGGTTTTTAAACAACCACTGGTATTTTTCATGATGTCGAAGCACGGCT
GTGCCCGTGTGTAGCGCATGGATGTTGAAAGCGGTGTTTTTGGACAGCGA
GGCTAAACGAAAAAAGAGCGAGATGACGGGGTGTCTATGCGATTTTTGGT
GGTTGGTTTGAAGGTGTCGGTGCCACCCCGTGGTTACTACAGTCCGAGGA
GGGCGGCCATGAGACCCAAGAAACGTAAAACGCCTACGTGGTAAACGAGG
GCCTCGAGGTCATACGGTGTCACGTCCGGGAGCATGGGTGGTGCGTAATT
ACACCAGTCACCGCGCATTGCTGTTCTGGATGGCCGTTGGTCGACGCGCA
CGCCGCGCTGGTCCCCGTTTTTTTTTGTGTTGGTGTTTTGTTTTGTTTTG
TTTTGTGTGTTGGGGGTCAGGTGTGTGTGTGTGTTGTGTGGTGCATTCGC
AGCGGTTGACTCATGGCGCTAGCTCCGAAGGGACAAGCTACGCCGCCGCG
AGATTGGTCATCGTTGTGGGAGCGACATATGTCATAAGGCAGCAATGGCC
CTTTAAATGTGCACGTTGAATAGTCGTCACAGTGCGTGTTCTAGATCACG
CACTCCTCTTAAGACGGAGGTTGATGAGGACCGTTGTACGAGACATGAAT
ACCTCGAAACAAAGTTAACTCCCCCCCCGACAAACACACGCACGCATGCA
AAACATGAGTGCGCCACACACACACACGATTATCCCCTGACAATCGCGTG
GGTACCGTTCCATGATTTTCCTCCTGCACCCCGTCTCCACAGTTCTCTGC
TGAGGTGAACGCGTTCATGTGTCCCCCGCTGTTCGGCTGGCTTGTGGGAA
AATCGGAGCTCACTGAAGGCGTTGTCGATGTCAAGGTGAGGCAGGTCGAC
AGAACGGGAGAGAGAAAACATCGAACAGGCTTGCCACCCCACACACCCCG
AGGCTTTCGGAGCGGTCATGCGTTGCCCCTGTGAGACACGAGGAGGTGGC
GAGGGAGCCGGAGAGTGCGCGAAGTAAATGTCGCTCATTGGGATTGGGAT
ATACTTTTTTTTTTTGTGCGTTTCAAACTTAATCCCGCGGAGGGTGTCGT
TGTGGTGTTTGTTTAAGACTGTGCGTCGCACGCCATCCGTACTTCTCGGA
GAAGCGAAAACAACTAAACCACCGGCCCACGCACGTTCTAAGCGTTGAAC
ACCCTCGTGCCAAAGGTCGTTCTCAGAAAGGGGGTAAGGCAAAGGAGATT
GGGGCGACTAAGGAAGAGGCGACTTTGGTGATTTGTATAAGGACCCGGTG
ATTTGTATAAGGACCCTGAGCCTTCCGTGTCGTGCCACGACCGGAAGCCC
GCCTATTGATGTACCTACCTTGTCGTCTCTCGGACCTCCTTCTTTGTTCC
CTCCGGTGATGTATCCTTCCCTTGACTGACACTTACGCATACCTCCCCAG
TTGGAGTTTGCCCTTGACTGATGCCTATGCGTACCTTCGCTATCGGAACT
TGCCCTTGGCTGACACCTTATGCATACCTCCCTGTTCAGAGTCTTCCCTT
GCCTGACACCTATTCACACCCCCCCTGCTGTTGGACTATTTATCGAGATT
GTGACTTTTCTGTTTTCTCGCCGCCGCCGCCGCCGCCGCCACCATTGCAG
GCGACCAAAGAAGGGGAGGGTCCTAGCCAGGAGGTTTGGCGGAATACCGT
CAAGGTGGAACGCTGCCGGTACCTCGAGGCGAGCAAGTGCAAGGGGACGT
GCATGAACCTGTGCAAGCTCCCCACCGAAGCCTTCTTTAGGGAAGACCTG
GGTGAGTGGTCGCAAAGCCAGCCCGGGCGAGCGGGCGGTGTGGGTGTGTG
TGCTCACCGTTCCGTACAGAGATTGTTGTGAAAGACAGTGGCAGCAGTAG
GCAGCGCGAGGCGTTAATGTCAGCATCCTCATTGTGCTGCCTGAGACAGA
CACACAGCGGAGCTAGGAGTTAAAAATGGCGCTGCGCTGTGGCCACGAGA
CAGGAATGAAACCGCATAATCGAGGCGTGCGTTCGTGCGTGCGTGTGTGT
CTCTCTTTATTGTTAGCATCGGCCGCGCTAGTCGGCTGAGTAATGAACAA
CGTTGGTCTAGCGGTGCGTGTGTTGCACGTACGTGAGACGACGACGCCAC
CTCTAGTACTTCCGTAGTCGTAGTCCCAACAGCAACAAACCTGGGCCGTA
ACTTGCTATTTGCGCCAAAACCTTGTTGCCCTTTTCTGAAACAGAGTTGG
CTGGGGTACTACCCTAGTCTTCGTCCCAACAACAAACTAGGGCCGTAACT
TGTTATTTGCGCCTAGGCGTTGTGCCCCTTTCTGAAACAGAGTTAGCTGG
GGTAGCTTCCCCGTTGCTCGATTGATGATGATCGCTCCGCCGCTCTGCCT
CGTCGGCGGGGTCTTGCCAGGTATGCCGTTGCGCATGACCCCGAACTTCG
AAGACCTTTCGTGCGAGTTCGCGTTCGGTCAAGATGCCTTGCCTGCTGAG
GAAGACCCTCTGATGCGGGAGGTGAGCCAGAGGGAGGAGTGGTGGAGAGT
AGAGGGGGGGGCGGGGGGGGGCGCTACTCTTATGTTTTGCATGCCTTAGT
CGTTGGACCATTGACCACGCGTCCTCGAGAGGAGGGAAAAGAAAAAATGA
AGGCAGCAGAAAGAGGGGGAGAGACGCAAAAAAATGAAAGGCGATCGTGA
GAGAGGAAAGAGAGAGAGTGACGGATAGAAAAATGAAGACCAACCTGAGA
GAGAGAAAGAGAGAGAAAGCGAGAGAGGAAGAGACGGATAGAACAAACAA
TAGATCAACGTGAGAGAGAGAGAGAGGAGGGACGGATAGAAAAATGAAAG
AGAGAGAGAGAACCGGAGACGCTGAAGGTGGGAACAACTAGGAGAGAGAC
AGGAAGAGGTCTTAATCGAGCACTCTATCTCGGAAACCGCTGTGTGACGA
AGTTTTGCTGTGTCCTGAAATCCCAGCTTCCTCACTCTTCTCTGCCCCCC
CCCGCCTCCCCCACCCCCGTCACCGTCACCGTCGCCGGACTAAACCCCCT
TCCAGCCCTGCTGGACCGAGTGCCTCAGCTCGGGCAAGCAGCCGAAAAAG
CCCCAGAGAGCTTGCCACACCATGCCGGAATCCCCCCTCAGGGGACCGTA
A
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12890:3..3803+

>mRNA_E-fasciculatus_F_contig12890.2181.1 ID=mRNA_E-fasciculatus_F_contig12890.2181.1|Name=mRNA_E-fasciculatus_F_contig12890.2181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1758bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12890:3..3803+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCGCTGCGGTAGAGGCGGAGGCGGCGATCCGCGCCAAGGGCAACAA
CGACAACGACGGGAGAACCGCGATCGCGGCCGGCGGCGGCGGTGATGGTG
CCGGTTCTCCTGCGGGCGAACCGGCGTTAGCAGCAGCAGCAGCAGCAGCA
GCAGATGCCACGGTGCTGCGAGGGGGAAAAGCTGGGCGGGGCGGGCCGGG
GGCGGCGAACGGCAGCGGGGGCAACGGTAGCGTTGCGGTATCGACAGCAT
TGGCGGGGACACGGAGGGCCGGCGGCGGGATGGGGGGGGGGTACACGTAC
GAGGACTACGTCGCCCTGGCGACCGGACTGCAGGCCGGCGCGCCCGAGAG
GCAGAGGGAGGTGGTGCGGGGGGTCCTGCGATCGGTCTTCCCGGCGTGGT
TCCCGGCGTTCTATCGCATGCTTTTCCCTCCGAGCAAGATGTCCGCTGCG
GTAGAGGCGGAGGCGGCGATCCGCGCCAAGGGCAACAACGACAACGACGG
GAGAACCGCGATCGCGGCCGGCGGCGGCGGTGATGGTGCCGGTTCTCCTG
CGGGCGAACCGGCGTTAGCAGCAGCAGCAGCAGCAGCAGCAGATGCCACG
GTGCTGCGAGGGGGAAAAGCTGGGCGGGGCGGGCCGGGGGCGGCGAACGG
CAGCGGGGGCAACGGTAGCGTTGCGGTATCGACAGCATTGGCGGGGACAC
GGAGGGCCGGCGGCGGGATGGGGGGGGGGTACACGTACGAGGACTACGTC
GCCCTGGCGACCGGACTGCAGGCCGGCGCGCCCGAGAGGCAGAGGGAGGT
GGTGCGGGGGGTCCTGCGATCGGTCTTCCCGGCGTGGTTCCCGGCGTTCT
ATCGCATGCTTTTCCCTCCGAGCAAGTTCTCTGCTGAGGTGAACGCGTTC
ATGTGTCCCCCGCTGTTCGGCTGGCTTGTGGGAAAATCGGAGCTCACTGA
AGGCGTTGTCGATGTCAAGTTCTCTGCTGAGGTGAACGCGTTCATGTGTC
CCCCGCTGTTCGGCTGGCTTGTGGGAAAATCGGAGCTCACTGAAGGCGTT
GTCGATGTCAAGGCGACCAAAGAAGGGGAGGGTCCTAGCCAGGAGGTTTG
GCGGAATACCGTCAAGGTGGAACGCTGCCGGTACCTCGAGGCGAGCAAGT
GCAAGGGGACGTGCATGAACCTGTGCAAGCTCCCCACCGAAGCCTTCTTT
AGGGAAGACCTGGGCGACCAAAGAAGGGGAGGGTCCTAGCCAGGAGGTTT
GGCGGAATACCGTCAAGGTGGAACGCTGCCGGTACCTCGAGGCGAGCAAG
TGCAAGGGGACGTGCATGAACCTGTGCAAGCTCCCCACCGAAGCCTTCTT
TAGGGAAGACCTGGGTATGCCGTTGCGCATGACCCCGAACTTCGAAGACC
TTTCGTGCGAGTTCGCGTTCGGTCAAGATGCCTTGCCTGCTGAGGAAGAC
CCTCTGATGCGGGAGGTATGCCGTTGCGCATGACCCCGAACTTCGAAGAC
CTTTCGTGCGAGTTCGCGTTCGGTCAAGATGCCTTGCCTGCTGAGGAAGA
CCCTCTGATGCGGGAGCCCTGCTGGACCGAGTGCCTCAGCTCGGGCAAGC
AGCCGAAAAAGCCCCAGAGAGCTTGCCACACCATGCCGGAATCCCCCCTC
AGGGGACCGTAACCCTGCTGGACCGAGTGCCTCAGCTCGGGCAAGCAGCC
GAAAAAGCCCCAGAGAGCTTGCCACACCATGCCGGAATCCCCCCTCAGGG
GACCGTAA
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