mRNA_E-fasciculatus_F_contig1289.2178.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI) HSP 1 Score: 506 bits (1304), Expect = 2.800e-166 Identity = 562/717 (78.38%), Postives = 571/717 (79.64%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFPEDKDRMEEDEEEEKKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVAPDASAPPSGILPLPEESEXXXXXXXXXXXEYDGEYVEAGARRRAVRGPEPAVAGWVAAGIASGDISSEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGSVEKDNAEAAGAEAPPAAAPAGVEAGADAEAETVTPGKKSTKKLKKEQASPPAGVSNGAVTGEGTAAAANGDGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------PAAGESARKTVTFGANMAKEHQTSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 2007
T + DWERIDNLRIDKYYTLVRVFVREALAFC LP PPA E Q + N P +E ETSAKAGG VWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGG DMPTEAFLVALAPWLRVAAEPETNPVVF+RTFEGVFEGLL LFPEDKD MEE EEEEKKVFA VE+D+VQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGV PDA+APPSGILPLPEES XXXXXXXXX EYDGEYVEAGAR RA RGPEPAVAGWVAAGIASG ISSE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+GSVEKD+ E A AEAP AA AGVEAGADAEA VTPGKKS K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PAAGESARKTVTFGANMAKEHQ SVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF
Sbjct: 125 TMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLP-PPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGG-VWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEE-EEEEKKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILPLPEESXXXXXXXXXXDGEYDGEYVEAGARLRAARGPEPAVAGWVAAGIASGAISSEX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKQSRGSVEKDSGEVADAEAP-AATRAGVEAGADAEAGAVTPGKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVSADGVAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSLEAVASPTPLPGNTASEEVSAPSSGSFQTPPKNXXXXXXXXXXXXXXXXXXPAAGESARKTVTFGANMAKEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 836
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A225WWZ0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ0_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.010e-20 Identity = 76/217 (35.02%), Postives = 111/217 (51.15%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELF---PEDKDRMEE-DEEEEKKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE +A R VQ WD L+ ++ EV++ P GLR+HLADV+ E NA G D+ TEAF++ L P+ + + E + VFKR E VF+ +L + P+ + EE D EEE KVF VE+ QVQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------VQD---------------------------WDEDLVQEFVTILSAEVVS--QLPNGLRMHLADVYLTEIYNAAGQDVTTEAFIILLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKYKFGPQSEQEEEETDAEEEDKVFEQVEVAQVQHRIFAIASADDTAERNRSALYTLYKKF 270
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: M4BNE3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNE3_HYAAE) HSP 1 Score: 95.1 bits (235), Expect = 1.080e-16 Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAF-CRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFP--------EDKDRMEEDEEE----EKKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVAPDASAPPSGILP 696
T +W +D LR+DK+Y+LVR FVRE +A C VQ WD + ++ E+++ P GLRLHLADV+ E NA G ++ TEAF+ L P++ + + E + +VFKR E VFE LL + D + E DEEE E K F VE+ QVQ +F +A+A +T + R LY L++++ T + +A I P
Sbjct: 82 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLC---------VQH---------------------------WDEKWVHEFVTIVSTEIVS--QLPNGLRLHLADVYLTEMYNAAGQEITTEAFVALLEPFITLLSS-EHDKMVFKRVRESVFEDLLTKYKCGPQSETKRDDSQEETDEEEGHEKEAKGFEQVEVAQVQHRIFAIASADETAECNRSALYTLYKKFFATTHIDSFQAAQEEAIKP 287
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A3R7HW27_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HW27_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.840e-16 Identity = 72/224 (32.14%), Postives = 106/224 (47.32%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFPEDKDRMEEDEEEEK-----------KVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE++A R VQ WD L+ ++ EV++ P GLRLHLAD++ E NA D+ TEAF+ L P+ + E + VFKR E VFE ++ + +E EE+ KVF VE++QVQ +F +A+A T ++ R LY L++R+
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRESVALLR--------VQD---------------------------WDEALVEEFVTILSAEVVS--QLPNGLRLHLADLYLVEIYNAASNDLTTEAFVTLLEPFFALLGS-EYDKTVFKRVRELVFEAMVTGYKFGPQAEKEVEEKXXXXXXXXXXXXDKVFENVELEQVQHHIFTLASADDTAERNRSALYTLYKRF 277
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A2P4Y0J0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0J0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.160e-16 Identity = 72/220 (32.73%), Postives = 107/220 (48.64%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFPEDKDRMEEDEEEE-------KKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE +A R VQ WD L+ ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ L P+ + + E + VFKR E VF+ +L + + E+DEE KVF VE+ QVQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------VQD---------------------------WDEELVQEFVTILSAEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKYKFGS-QPEKDEEXXXXXXXXXNKVFEQVEVVQVQHRIFAIASADDTAERNRSALYTLYKKF 272
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A6A3MMN9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MMN9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.420e-16 Identity = 72/225 (32.00%), Postives = 107/225 (47.56%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELF-----PEDKDRMEEDEE-------EEKKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE +A R VQ WD LL V+ EV++ P GLR+HLAD++ E NA G D+ T+AF+ + P+ + + E + +VFKR E VFE +L + PE + EE KVF V++ QVQ +F +A+A T ++ R LY L++++
Sbjct: 124 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------VQD---------------------------WDEDLLQTFVSVLSAEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTDAFVTLMEPFFTLLSG-EYDKIVFKRVRELVFEDMLTKYKLGPQPEKESXXXXXXXXXXXXXXEEDKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 310
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: G4YJ53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJ53_PHYSP) HSP 1 Score: 92.4 bits (228), Expect = 7.690e-16 Identity = 71/225 (31.56%), Postives = 106/225 (47.11%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFPEDKDRMEEDEEEEK------------KVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE +A R VQ+ WD LL ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ + P+ + + E + VFKR E VFE +L F +E E+ KVF V++ QVQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------VQE---------------------------WDEDLLQTFVTILSEEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLMEPFFTLLSG-EYDKTVFKRVRELVFEDMLTKFKFGPQPEKEQEDXXXXXXXXXXXXXXXKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 278
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A3M6V8T8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8T8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.470e-15 Identity = 70/225 (31.11%), Postives = 109/225 (48.44%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELF---PEDKDRMEEDEEEEK---------KVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T + +W +D LR+DK+Y+LVR FVREA+A R VQ W+ L+ ++D++ EV++ P G R+HLAD++ E NA G D+ +EAF+ L P+ + E + VFKR E VF+ +L + P+ K EE+ KVF VE+ VQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMQREWHGLDGLRLDKFYSLVRKFVREAVALLR--------VQD---------------------------WNETLVQELADILSTEVVS--QLPNGPRMHLADLYLTEIYNAAGKDIVSEAFVTLLEPFF-ILLNSEYDKTVFKRVRELVFDEMLSKYKFGPQTKTGEEEEXXXXXXXXXXXXXHKVFEKVELALVQHRIFAIASADATIERNRSALYTLYKKF 278
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: H3GJI2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJI2_PHYRM) HSP 1 Score: 88.6 bits (218), Expect = 1.220e-14 Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELF-----PEDKDRMEEDEEEEK----KVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE++A R VQ WD ++ ++ EV++ P GLR+HLAD++ E NA G D+ TEAF+ L P+ + + E + VFKR E VFE +L + PE +D KVF V++ QVQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRESVALLR--------VQD---------------------------WDEEIVQEFVTILSSEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFVTLLEPFFTLLSG-EYDKTVFKRVKELVFEDMLTKYKFGPQPEKEDXXXXXXXXXXXXXDKVFELVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Match: A0A329RYE7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RYE7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 8.600e-14 Identity = 64/222 (28.83%), Postives = 105/222 (47.30%), Query Frame = 1
Query: 1 TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKKGKKNPPTKEMETSAKAGGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGGDMPTEAFLVALAPWLRVAAEPETNPVVFKRTFEGVFEGLLELFPEDKDRMEEDEEEE---------KKVFATVEMDQVQACLFEVAAAPQTRDKRRVKLYELHRRY 639
T +W +D LR+DK+Y+LVR FVRE +A R + + W+ L+ ++ EV++ P GLR+HLAD++ E NA G ++ TEAF++ L P+ + + E + VFKR E VFE +L + +E ++ KVF ++ QVQ +F +A+A T ++ R LY L++++
Sbjct: 92 TMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------------------------DQD---------WEEDLVQEFVTILSTEVVS--QLPNGLRMHLADLYLTEIYNAAGKEVTTEAFMILLEPFFTLLSS-EYDKTVFKRVRELVFEDMLTKYKFGPQSEKEKDDXXXXXXXXXXXSKVFEQFDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1289.2178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1289.2178.1 >prot_E-fasciculatus_F_contig1289.2178.1 ID=prot_E-fasciculatus_F_contig1289.2178.1|Name=mRNA_E-fasciculatus_F_contig1289.2178.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=670bp TSESDWERIDNLRIDKYYTLVRVFVREALAFCRLPRPPAEEVQQPKKTKKback to top mRNA from alignment at E-fasciculatus_F_contig1289:104..4756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1289.2178.1 ID=mRNA_E-fasciculatus_F_contig1289.2178.1|Name=mRNA_E-fasciculatus_F_contig1289.2178.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4653bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:104..4756- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1289:104..4756- >mRNA_E-fasciculatus_F_contig1289.2178.1 ID=mRNA_E-fasciculatus_F_contig1289.2178.1|Name=mRNA_E-fasciculatus_F_contig1289.2178.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4020bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:104..4756- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |