mRNA_E-fasciculatus_F_contig12889.2177.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A6H5JI02_9PHAE (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI02_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 1.120e-137 Identity = 201/203 (99.01%), Postives = 203/203 (100.00%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLKV 609
IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAE+AFERTLK+
Sbjct: 166 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEVAFERTLKI 368
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A7S2XUF9_9STRA (ADP,ATP carrier protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUF9_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.240e-88 Identity = 138/203 (67.98%), Postives = 168/203 (82.76%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLKV 609
+E HE+RKF+ MSVMMFAIIYVFTMTRDTKD LVVTNCGAEAIAFLKVY V+PAA +FMIGY+ S+H RA+F++TI PFF FY LFAFV+YP RG LH SA G + V S+++N+GR+W+FS+YY+++ELWGSAGVPLLFW CANEVT + QAKRFYPLFA++GN PIASG TM +VS +R G+DA+ AFE +LKV
Sbjct: 213 VEPHEMRKFMAMSVMMFAIIYVFTMTRDTKDTLVVTNCGAEAIAFLKVYGVVPAATIFMIGYSACSHHFSKRAVFYLTIVPFFLFYGLFAFVLYPARGFLHGSA-TEGDTKGV-SYLVNLGRYWLFSVYYIIAELWGSAGVPLLFWQCANEVTSIKQAKRFYPLFALVGNFAPIASGLTMKHVSSHRSQGVDADSAFEHSLKV 413
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A7S3UWV3_HETAK (ADP,ATP carrier protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWV3_HETAK) HSP 1 Score: 270 bits (690), Expect = 5.090e-84 Identity = 138/203 (67.98%), Postives = 164/203 (80.79%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLKV 609
IE E+RKF MSVMMFAII+VFTMTRDTKD L+VTNCGAEAIAFLKVY V+PAAA FMI Y+ L+ H+ R F+ TI PFFA++ LFAFV YPMRGVLH SAG E S+++N+GR+W+FSLYYVV+E+WGSAGVPLLFW ANEVT + QAKRFYPLFA++GNL PIASG TM +V+R+R G+D E AFE +LKV
Sbjct: 119 IEGPEVRKFAAMSVMMFAIIFVFTMTRDTKDTLIVTNCGAEAIAFLKVYGVVPAAAGFMIWYSTLTQHLSKRKCFYATIVPFFAWFGLFAFVAYPMRGVLHASAG----KEAGLSYVVNLGRYWLFSLYYVVAEIWGSAGVPLLFWQTANEVTSIPQAKRFYPLFALVGNLAPIASGMTMKHVTRHRD-GVDPEAAFEHSLKV 316
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: W7T7G0_9STRA (ADP,ATP carrier protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7G0_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.870e-75 Identity = 125/201 (62.19%), Postives = 154/201 (76.62%), Query Frame = 1
Query: 13 ELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSR--NRPAGMDAEMAFERTLKV 609
E KF +S+MMF IIYVFTMTRDTKD L+V+ CGAEAIAFLKVY V+PAA FM+GY+ +N++ RALF++TI PFFAFYALFA+V+YP R LH A ++ ++ N+ R+W+FSLYY+ SELWGSAGVPLLFW CAN+VTP+ QAKRFYPLFA+LGN+ PI SGQT A+VS+ R D +AFE TLKV
Sbjct: 137 EAPKFFALSLMMFCIIYVFTMTRDTKDTLIVSYCGAEAIAFLKVYGVVPAAMAFMVGYSAAANYLSKRALFYVTIIPFFAFYALFAYVLYPNRHNLHLEQFAPSPGANL-PYVRNLFRYWIFSLYYITSELWGSAGVPLLFWQCANDVTPIDQAKRFYPLFAVLGNMAPIVSGQTTAFVSKWIKRLHPHDEHLAFENTLKV 336
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: K0RFM5_THAOC (ADP,ATP carrier protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RFM5_THAOC) HSP 1 Score: 234 bits (598), Expect = 1.200e-69 Identity = 117/204 (57.35%), Postives = 149/204 (73.04%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHH--SAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLK 606
I + EL F MSVMMF IYVFT RDTKD LVV+NCGAEAI FLK+YAV+P AA+F++GY+ LSN +G ALF++T+ PFF FYA+FAFV++P R +H + GA + +N+ R+W +SL++VVSELW SAGVPLLFW CAN+VTPM QAKRFYPLFA+ GNLGPI SG+ M+Y+ + D ++ F TLK
Sbjct: 195 ISRSELPHFACMSVMMFLFIYVFTTVRDTKDTLVVSNCGAEAIPFLKLYAVMPCAAMFIVGYSKLSNVLGREALFYVTLLPFFVFYAIFAFVLFPNRDEIHFPPAGGAAVVGNGALNAALNLARYWSYSLFFVVSELWASAGVPLLFWQCANDVTPMAQAKRFYPLFAVTGNLGPIVSGKVMSYIVSLQKT--DDDVGFGSTLK 396
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A482SNG1_9ARCH (NTP/NDP exchange transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNG1_9ARCH) HSP 1 Score: 231 bits (588), Expect = 1.330e-69 Identity = 115/200 (57.50%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 13 ELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGM-DAEMAFERTLKV 609
EL+KF ++S MMF I++VFTMTRDTKDAL+VTNCGAE+IAFLKVY V+PAA FM+ Y+ L+ + LF+ + PFF FYA FAF++YP+R +LH + A+ + FS +N+ R+W+FSLYY+VSELWGSAGVPLLFW+CAN+V + QAKR YPL +++GNLGPI SG TMA VS + + E AFE +LK+
Sbjct: 81 ELKKFFSLSFMMFWIVFVFTMTRDTKDALIVTNCGAESIAFLKVYGVIPAAVSFMVIYSALARRLSHSHLFYAILLPFFVFYAAFAFILYPLRNILHPTHWALPNNG--FSFAVNLLRYWIFSLYYIVSELWGSAGVPLLFWSCANDVVVIDQAKRLYPLMSLIGNLGPILSGVTMAMVSAFVAKNVHNDEAAFELSLKI 278
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: B8LCT8_THAPS (ADP,ATP carrier protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCT8_THAPS) HSP 1 Score: 223 bits (567), Expect = 3.620e-65 Identity = 114/207 (55.07%), Postives = 146/207 (70.53%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLH----HSAGAMGKDEH-VFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLK 606
I K EL FL+MS++MF IYVFT RDTKD LVV+NCGAEAI FLK+Y V+P AA+F++ Y+ LSN + LF++T+ PFF FY +FAFV++P R ++H +AGA + N+ R+W FSL+++VSELW SAGVPLLFW CAN+VTPM QAKRFYPLFAI+GNL PI SG+ M+YV + D + F TLK
Sbjct: 180 ISKAELPHFLSMSILMFLFIYVFTTVRDTKDTLVVSNCGAEAIPFLKLYGVMPCAAMFIVAYSKLSNVLSKSGLFYVTLVPFFVFYGVFAFVLFPNRDLIHFPPAEAAGAXXXXXXXALTAATNLLRYWSFSLFFIVSELWASAGVPLLFWQCANDVTPMAQAKRFYPLFAIIGNLAPIVSGKVMSYVISLQKTNDD--VGFGSTLK 384
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A7S2XIS6_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIS6_9STRA) HSP 1 Score: 213 bits (543), Expect = 3.900e-64 Identity = 111/205 (54.15%), Postives = 142/205 (69.27%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHS---AGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLK 606
I + EL F +MS MMF IYVFT RDTKD LVVTNCGAEAI FLK+Y V+P A +F++ Y+ LS + ALF +T+ PFF FYALFA+V+YP R +H A G+ + +N+ R+W FSLY++VSELW SAGVPLLFW AN+VT M QAKRFYPLFAI GNL PI SG+ M+++ ++ + D+ FE +LK
Sbjct: 144 ISESELPHFFSMSFMMFLFIYVFTTARDTKDTLVVTNCGAEAIPFLKLYGVMPCAMIFIVAYSKLSETLSKEALFQVTLLPFFIFYALFAWVLYPNRDAIHFIPAVTAATGEAVSAGTAALNVLRYWSFSLYFIVSELWASAGVPLLFWQVANDVTSMEQAKRFYPLFAITGNLAPIVSGKVMSWIVDSQKSTHDS--LFEVSLK 346
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A7S2WMM2_9STRA (ADP,ATP carrier protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WMM2_9STRA) HSP 1 Score: 217 bits (553), Expect = 6.180e-64 Identity = 108/202 (53.47%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 1 IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHHSAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLK 606
I K E +FL MS+MMF IY+FT RDTKD+LVV+NCGAEAI FLK+Y V+P A LF++GY+ LS+ +G +ALF+ T++PF FY +FAFV++P R +H E + ++N+ R+W FSLY+++SELW SA +PLLFW ANEVTPM QAKRFYPLFA+LGNL P+ SG+ M Y+ + D + F TLK
Sbjct: 109 ITKSEFPQFLCMSIMMFLFIYIFTTVRDTKDSLVVSNCGAEAIPFLKLYGVMPTAFLFILGYSKLSSVLGKKALFYTTLSPFIIFYTVFAFVLFPKRDSIHFLPAT---GEGAANAVVNLFRYWSFSLYFIISELWASASIPLLFWQFANEVTPMAQAKRFYPLFAVLGNLAPVVSGKVMTYLVSIQKTTDD--VGFGSTLK 305
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Match: A0A7S2PNE8_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNE8_9STRA) HSP 1 Score: 217 bits (552), Expect = 6.530e-63 Identity = 110/200 (55.00%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 13 ELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAVLPAAALFMIGYNWLSNHVGSRALFHMTITPFFAFYALFAFVMYPMRGVLHH--SAGAMGKDEHVFSHMINMGRFWMFSLYYVVSELWGSAGVPLLFWTCANEVTPMTQAKRFYPLFAILGNLGPIASGQTMAYVSRNRPAGMDAEMAFERTLK 606
E+ F +MSVMMF IYVFT RDTKD LVV+NCGAEAI FLK+Y V+P A F++ Y+ LSN +G + LF++T+ PFF FY +FAFV++P R V+H + GA + N+ R+W FSL+++VSELW SAGVPLLFW CAN+VTPM QAKRFYPLFA+ GNL PI SG+ M+ V + D + F TLK
Sbjct: 372 EMPHFASMSVMMFLFIYVFTTVRDTKDTLVVSNCGAEAIPFLKLYGVMPCATAFIVMYSKLSNALGKQTLFYVTLLPFFVFYGVFAFVLFPNRDVIHFPLAEGAAAAGGGALTAATNLMRYWSFSLFFIVSELWASAGVPLLFWQCANDVTPMAQAKRFYPLFAVTGNLAPIVSGKVMSKVISLQKTKDD--IGFGATLK 569 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12889.2177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12889.2177.1 >prot_E-fasciculatus_F_contig12889.2177.1 ID=prot_E-fasciculatus_F_contig12889.2177.1|Name=mRNA_E-fasciculatus_F_contig12889.2177.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=213bp IEKHELRKFLTMSVMMFAIIYVFTMTRDTKDALVVTNCGAEAIAFLKVYAback to top mRNA from alignment at E-fasciculatus_F_contig12889:2..3535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12889.2177.1 ID=mRNA_E-fasciculatus_F_contig12889.2177.1|Name=mRNA_E-fasciculatus_F_contig12889.2177.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3534bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12889:2..3535+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12889:2..3535+ >mRNA_E-fasciculatus_F_contig12889.2177.1 ID=mRNA_E-fasciculatus_F_contig12889.2177.1|Name=mRNA_E-fasciculatus_F_contig12889.2177.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1278bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12889:2..3535+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |