prot_E-fasciculatus_F_contig12883.2173.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12883.2173.1
Unique Nameprot_E-fasciculatus_F_contig12883.2173.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length339
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12883.2173.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.540e-122
Identity = 249/329 (75.68%), Postives = 258/329 (78.42%), Query Frame = 0 
Query:   23 MADDCDGAKGHDGFEGPASVGADSATAAAIKSDGDSIYHRLIKEQRLELEQLKRAAREASPSSSSSRIRHAFERPSSATINGAEFPLPPSPTSNTRPRIVHSDTHVSGDGGGESGSVIGSASYVRELSAGGPHYYGSSSTADGDRLGGGAGGQRYAGVGGVGGGFLAAITRERTDKSRSGADXXXXXXXXXXXXXASAEGFGGDSGRYLRGYRDPFKAVADSDTGRKSSRGAVNAQGVVFSAADNYHVEESSSRGTAVGFDPIQTGGXXXXXXXXXGEQHP-VEKQQSLTAASRRGSRGDETTATAAS-----------KAHTTPRTTA 339
            MADDCDGAKGHDGFEG A VGADSA AA+IK DGDSIYHRLIKEQRLELEQLKRAAREASPS S  +IRHA ERPSSAT+NGAE  LPPSPTS TR RIV+SDTHVS  GGG+ G V GSASYV ELSAGG H YGSS TADGDRLGGGAG QRYAGVG +GGGFLAAITRERTDKSR GA              ASAEGFGGDSGR LRG RDPFKAVADS TGR  SRGAV+AQGVVFSAADNYH EE SS GTAVGFDP+QTG XXXXXXXXX      VEKQ SLTA SRRGSRGDE   TAA+           KAH TP TTA
Sbjct:    1 MADDCDGAKGHDGFEGQAGVGADSAAAASIKDDGDSIYHRLIKEQRLELEQLKRAAREASPSRS--KIRHALERPSSATLNGAEDTLPPSPTSITRQRIVYSDTHVSDGGGGDRGDVTGSASYVGELSAGGRHNYGSS-TADGDRLGGGAGVQRYAGVGDIGGGFLAAITRERTDKSRGGAGTTRGGEESGGR--ASAEGFGGDSGRSLRGVRDPFKAVADSGTGRSGSRGAVDAQGVVFSAADNYHAEERSSGGTAVGFDPMQTGXXXXXXXXXXXXXXXXVEKQPSLTAMSRRGSRGDEKITTAAAYATGEASGTAPKAHATPGTTA 324
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12883.2173.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 7.520e-111
Identity = 233/329 (70.82%), Postives = 244/329 (74.16%), Query Frame = 0 
Query:   23 MADDCDGAKGHDGFEGPASVGADSATAAAIKSDGDSIYHRLIKEQRLELEQLKRAAREASPSSSSSRIRHAFERPSSATINGAEFPLPPSPTSNTRPRIVHSDTHVSGDGGGESGSVIGSASYVRELSAGGPHYYGSSSTADGDRLGGGAGGQRYAGVGGVGGGFLAAITRERTDKSRSGADXXXXXXXXXXXXXASAEGFGGDSGRYLRGYRDPFKAVADSDTGRKSSRGAVNAQGVVFSAADNYHVEESSSRGTAVGFDPIQTGGXXXXXXXXXGEQHP--VEKQQSLTAASRRGSRGDETTATAAS----------KAHTTPRTTA 339
            MADD D AK HD FEGP  V ADSA A  IK DGDSIYHRLIKEQR ELEQLKRAAREASPSS     +HA ERPSSAT+N AE  LPPSPTSN RPRIVHSDTH SG GGG+SG   GS SYV ELSAGG H+YGSS TADGDRLGGGA GQRYAGVG VGGGFLAAITRERTDKSRSGA              ASA+G GGDSGR+LRG RDP KA ADSDTGR SSRGAV+AQ   FSAAD+YH +E SS GTAVGFDP+QTG XXXXXXXXX       VEKQ SLTA  RRGS+GDE T  AA           KAH TP TTA
Sbjct:    1 MADDFDSAKEHDDFEGPGGVVADSAAATTIKDDGDSIYHRLIKEQRFELEQLKRAAREASPSS-----KHALERPSSATLNDAEDTLPPSPTSNIRPRIVHSDTHASGGGGGDSGCETGSTSYVGELSAGGRHHYGSS-TADGDRLGGGAEGQRYAGVGDVGGGFLAAITRERTDKSRSGAGTKRGEEESGGR--ASADGLGGDSGRFLRGVRDPSKAAADSDTGRISSRGAVDAQLAAFSAADSYHAKERSSGGTAVGFDPLQTGXXXXXXXXXXXXXXXXXVEKQPSLTAMLRRGSKGDEITTAAACATGKASGTAPKAHPTPGTTA 321
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12883.2173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTT2_ECTSI1.540e-12275.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC5_9PHAE7.520e-11170.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12883contigE-fasciculatus_F_contig12883:1770..3705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12883.2173.1mRNA_E-fasciculatus_F_contig12883.2173.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12883 1770..3705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12883.2173.1 ID=prot_E-fasciculatus_F_contig12883.2173.1|Name=mRNA_E-fasciculatus_F_contig12883.2173.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=339bp
MCPLPVRSFAVAAFAQAVYSSSMADDCDGAKGHDGFEGPASVGADSATAA
AIKSDGDSIYHRLIKEQRLELEQLKRAAREASPSSSSSRIRHAFERPSSA
TINGAEFPLPPSPTSNTRPRIVHSDTHVSGDGGGESGSVIGSASYVRELS
AGGPHYYGSSSTADGDRLGGGAGGQRYAGVGGVGGGFLAAITRERTDKSR
SGADTTRGGREEESGGRASAEGFGGDSGRYLRGYRDPFKAVADSDTGRKS
SRGAVNAQGVVFSAADNYHVEESSSRGTAVGFDPIQTGGGGGNISRRRGE
QHPVEKQQSLTAASRRGSRGDETTATAASKAHTTPRTTA
back to top