mRNA_E-fasciculatus_F_contig1286.2156.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: D7G5J0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J0_ECTSI) HSP 1 Score: 268 bits (684), Expect = 3.580e-86 Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 2
Query: 5 RPRSTTWSCSVLRSSNGPGGEEDGADSMGSGAAEDPNNLLGGQALQALEFWKNRKPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQSFTLEPMSMVGDRLATQV 427
RPRSTTWSCSVLRSSNGPGGEEDGADS SGAAEDP+NLLGGQALQALEFWKNR PSPALPPTQVIGLLMAALQRNDDPAEN+GLRTVF+FSSGMCRRAVGGTAE+FIK+ARYSVFGATVGCQSFTLEPMSMVGDRLATQV
Sbjct: 70 RPRSTTWSCSVLRSSNGPGGEEDGADSTDSGAAEDPDNLLGGQALQALEFWKNRTPSPALPPTQVIGLLMAALQRNDDPAENEGLRTVFEFSSGMCRRAVGGTAESFIKEARYSVFGATVGCQSFTLEPMSMVGDRLATQV 210
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A8J2WEJ8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ8_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.550e-23 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 2
Query: 167 KPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQSFTLE-----PMSMVGDRLATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIY 523
+P P V+ L M AL RNDDP + GLRT ++FSS MCR AVGG+ F+K AR F V +S++ + P + L T +V+V + G++R+FLWTL++QRRPPD G WL++
Sbjct: 48 RPDPIYSDEAVVALCMNALGRNDDPVPDAGLRTCWNFSSDMCRAAVGGSLADFLKYARNPTFAQLVDHESWSGKLGNRIPATQTRGALTTNMVTVQTNRGQERKFLWTLQQQRRPPDQGCWLVH 171
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: L1I8C0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I8C0_GUITC) HSP 1 Score: 93.6 bits (231), Expect = 3.160e-19 Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = 2
Query: 167 KPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGG--------TAETFIKDARYSVFGATVGCQSFTLE-----PMSMVGDRLATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLI 520
+PSP +V+ ++ L+ ND P + GL+ F FS+ MCR AVGG T E FIK A F + V C+ + E P S LATQ+ + +G +RRFLWTLE++RRPP G WLI
Sbjct: 34 EPSPEFSAEEVMYYILEGLKHNDFPEIDAGLKRCFAFSNNMCRSAVGGDDSRAGGTTVEHFIKYASNPTFQSLVRCEKYEREDMNFLPSSPTRGALATQIAHITTKNGDKRRFLWTLEQERRPPQQGCWLI 164
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A7S2EQH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQH2_TRICV) HSP 1 Score: 88.2 bits (217), Expect = 6.970e-17 Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 2
Query: 170 PSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQSFT------LEPMSMVGDRLATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIY 523
P P L ++ L + L+ ND P N GL F+FSS CR A+GG+ E FI A FG+ + + +T + P + + T +V V +GR RRFLWTL+++RRPP WLI+
Sbjct: 79 PDPDLDAETIVALCLDCLKNNDAPRTNAGLEVCFNFSSDRCRAALGGSLEKFIAYAANPTFGSMIDAKEWTQVSKGPVIPGTPTRGAMQTVLVDVKPVNGRDRRFLWTLQKERRPPRQDCWLIH 202
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A6T8NBT7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NBT7_HEMAN) HSP 1 Score: 87.4 bits (215), Expect = 1.500e-16 Identity = 54/133 (40.60%), Postives = 69/133 (51.88%), Query Frame = 2
Query: 167 KPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGG----------TAETFIKDARYSVFGATVGCQSFTLEPMSMVGDR-----LATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLI 520
+P L P VI L L+ ND P N GL F+F++ MCR AVGG + E FIK A FG+ Q F E ++++ LATQVVSV G RRFLWTL+++R PP G WL+
Sbjct: 75 EPLVDLSPDDVILALNRGLRFNDVPNNNSGLERCFNFANSMCRAAVGGDGGKTGSHVVSLEQFIKYADNPTFGSMCNNQGFEREKVNIIPGTPTRGALATQVVSVTTQKGDVRRFLWTLQQERLPPQQGMWLV 207
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A7S1GG25_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GG25_CYCTE) HSP 1 Score: 85.1 bits (209), Expect = 1.850e-16 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2
Query: 197 VIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQSFT------LEPMSMVGDRLATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIYGVVSSD 541
V+ L + L +N P N G+ T ++FSS CR + GG+ +TFI A VF A + Q + + P +M + T +V V S+G+ R FLWT++++RRPP WLI+ ++ D
Sbjct: 18 VVTLCLDGLMQNARPYNNAGVETCWNFSSDRCRASQGGSLDTFISHASNPVFAAMINAQKWKVLSRGPIIPGTMTRGAMQTVLVDVTPSNGKSREFLWTMQKERRPPRQDCWLIHECIAKD 138
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A7S1BUX0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUX0_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.320e-14 Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 2
Query: 170 PSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQ---SFT-------LEPMSMVGDRLATQVVSVV----ASDGRQRRFLWTLERQRRPPDTGKWLI 520
P+ L P V+ M +L+ DDP N GL FDF+S CR A+GG FI AR SVF + VG SF+ + P S+ + T +V V+ AS R FLWTL+++RRPP G WL+
Sbjct: 94 PNLDLDPLAVVRTCMDSLKNVDDPYHNAGLEINFDFASERCRAAMGGDLPKFISFARNSVFSSMVGVSKVWSFSGDQPLSPIIPGSVTRGDMVTVLVEVIPHPEASKEEARHFLWTLQKERRPPKQGMWLV 224
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A7R9U9G0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9G0_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.690e-14 Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 2
Query: 218 ALQRNDDPAENDGLRTVFDFSSGMCRRAVGG-----TAETFIKDARYSVFGATVGCQSFT-LEPMSMVGDR-----LATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIYGVVSSD 541
AL+ ND P N G T F F+ MCR G T E FI+ A FG+ +S+ L ++++ LATQ+V + DGR R+FLWTL++QRRPP G WL+ ++++
Sbjct: 6 ALKYNDQPLPNSGFATCFAFADSMCRATAGPRNQKTTLEDFIRYANNPTFGSMKNMRSYDFLGDINIIAGSPTRGALATQLVEIETQDGRMRKFLWTLQQQRRPPLQGCWLVRECLATE 124
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A7S3RF00_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RF00_9SPIT) HSP 1 Score: 81.3 bits (199), Expect = 1.280e-13 Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query: 161 NRKPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCR-RAVGGTAE--TFIKDARYSVFGATVGCQSFTLEPMSMVGD--RLATQVVSVVAS---DGR-QRRFLWTLERQRRPPDTGKWLIYGVVSSDVDGKL 556
+R P LP +V+ L+ ALQ ND+P N GLRT +D++ + R R V G + F K A S A + + EP S VGD + T VV++ DG+ RR+L+ L R+ RPP G W ++GV+ SD +G+L
Sbjct: 192 SRSWDPDLPVEKVVPNLLRALQSNDEPTLNAGLRTFWDWTHELYRGRPVNGHGDFSLFAKRAARSELAALLQSSGWQAEPYSPVGDGSKYGTHVVTIFPCGDLDGQGARRYLFQLRREMRPPYNGAWAVWGVIVSDANGEL 332
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Match: A0A6L4AG57_9CHLR (DUF4864 domain-containing protein n=2 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A6L4AG57_9CHLR) HSP 1 Score: 76.3 bits (186), Expect = 2.720e-13 Identity = 40/127 (31.50%), Postives = 72/127 (56.69%), Query Frame = 2
Query: 167 KPSPALPPTQVIGLLMAALQRNDDPAENDGLRTVFDFSSGMCRRAVGGTAETFIKDARYSVFGATVGCQSFTLEPMSMVGDRLATQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIYGVVSSDVD 547
+P P LPP V+ + + ALQ+NDDP + G+R F F+S R A G + FI+ + ++ + P++++ D A Q+V++++++G +++TL RQ+ PP G W+ V+ D+D
Sbjct: 11 QPIPELPPQMVVKIQLEALQKNDDPEPDYGIRVAFQFASPANRVATG-PVDRFIQLVKNPIYAPMLNWVGVEYGPINVM-DTEAQQIVTIMSAEGETIHYVFTLSRQKLPPYMGCWMTDNVLRIDLD 135 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1286.2156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1286.2156.1 >prot_E-fasciculatus_F_contig1286.2156.1 ID=prot_E-fasciculatus_F_contig1286.2156.1|Name=mRNA_E-fasciculatus_F_contig1286.2156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=162bp MGSGAAEDPNNLLGGQALQALEFWKNRKPSPALPPTQVIGLLMAALQRNDback to top mRNA from alignment at E-fasciculatus_F_contig1286:1222..4435+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1286.2156.1 ID=mRNA_E-fasciculatus_F_contig1286.2156.1|Name=mRNA_E-fasciculatus_F_contig1286.2156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3214bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1286:1222..4435+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1286:1222..4435+ >mRNA_E-fasciculatus_F_contig1286.2156.1 ID=mRNA_E-fasciculatus_F_contig1286.2156.1|Name=mRNA_E-fasciculatus_F_contig1286.2156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=972bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1286:1222..4435+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |