mRNA_E-fasciculatus_F_contig12847.2149.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI) HSP 1 Score: 928 bits (2398), Expect = 0.000e+0 Identity = 532/602 (88.37%), Postives = 542/602 (90.03%), Query Frame = 3
Query: 84 RPNALATVAGHGDYVKCLTYAEQGSVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAAEXXXXXXXXXXXXXXSNSAMVNPTGYSPAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVDARGERQTLLASPPXXXXXXXXXXXXXXXVGGTNGVVATAEAAAEPEFSRQPAPSSSSSLSSTLPSASQGKGGTAAVAKTAEGGAADGSVESGXXAT-AAAPKGVAAAGAEP 1886
RPNALATVAGHGDYVKCLTYAEQ VLVSGGLDKRILLWDLQRMSAPLMVLRGGSG XXXXXXXXXXXXXX GYSP QGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAA DASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVC+TDSEVLD+ELELGR GG+D T EQPMSMWLSSTQPHIALWGGEASGGGL LRSGRPAA+AGA+ AVADG GDRA EEDDM++DVF VTP FAEDPAEGGGEAGG+GGE GGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYP GTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSL+ESNVFDGELYAVDARGERQTLLASP XXXXXXXXXXX NGVVAT EAA EP+FSRQPAPSSSSSLSS LPSASQGKGG AAVAKTAEGG ADGSVE G AT AAAPKGVA AGAEP
Sbjct: 89 RPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXX--GYSPXXXXXXXXX-XXQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGREGGSDGTDSCEQPMSMWLSSTQPHIALWGGEASGGGLVLRSGRPAASAGAS--AVADGEGDRA-EEDDMDMDVFGVTPPFAEDPAEGGGEAGGMGGERGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPPGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLSESNVFDGELYAVDARGERQTLLASPSXXXXXXXXXXXP---AAADNGVVATEEAATEPKFSRQPAPSSSSSLSSPLPSASQGKGG-AAVAKTAEGGTADGSVEGGAGATVAAAPKGVA-AGAEP 679
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE) HSP 1 Score: 926 bits (2392), Expect = 0.000e+0 Identity = 530/618 (85.76%), Postives = 543/618 (87.86%), Query Frame = 3
Query: 3 GMHGVQDAATRAGALNRRTSTSPTPPP--RPNALATVAGHGDYVKCLTYAEQGSVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAAEXXXXXXXXXXXXXXSNSA-MVNPTGYSPAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVD-VFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVDARGERQTLLASPPXXXXXXXXXXXXXXXVGGTNGVVATAEAAAEPEFSRQPAPSSSSSLSSTLPSASQGKGGTAAVAKTAEGGAADGSVESGXXAT 1844
GMHGVQD A RA RPNALATVAGHGDYVKCLTYAEQ VLVSGGLDKRILLWDLQRMSAPLMVLRGGSGA XXXXXXXXXXXXXX M+N GYSPAA GRQQ GQ+QGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAA DASLVASGGTDRMIRLLDPRAGG QAAK+CKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVC+TDSEVLD+ELELGRGGGT+S+GPYE+PM MWLSSTQPHIALWGGEASGGGLALRSGRPAA+AG A AVADG VFDVTP F EDPAE GGEAGG+GGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYP GTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSL+ESNVFDGELYAVDARGERQTLLASPPXXXXXXXXXXXX G NGV ATAE A EP+ SRQPAPSSSSSLSS LPSASQGKGG AAVAKT +GG ADGSVE G AT
Sbjct: 202 GMHGVQDTAARAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAA-GRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTESSGPYEEPMFMWLSSTQPHIALWGGEASGGGLALRSGRPAASAGVA--AVADGXXXXXXXXXXXXXXXVFDVTPPFPEDPAERGGEAGGMGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPPGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLSESNVFDGELYAVDARGERQTLLASPPXXXXXXXXXXXX---AAGDNGV-ATAEPATEPKVSRQPAPSSSSSLSSALPSASQGKGG-AAVAKTTQGGNADGSVEGGAVAT 811
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A1D6ITS9_MAIZE (Transducin/WD40 repeat-like superfamily protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6ITS9_MAIZE) HSP 1 Score: 164 bits (414), Expect = 5.620e-39 Identity = 147/521 (28.21%), Postives = 214/521 (41.07%), Query Frame = 3
Query: 102 TVAGHGDYVKCLTYAEQGS-VLVSGGLDKRILLWDLQRMSAPLM---------VLRGGSGAAEXXXXXXXXXXXXXXSNSAMVNPTGYSPAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVV--------------------------SGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVD 1556
T+ H DYV CL AE S ++ SGGL + +WDL AP+ V G SG A SN GYSP AA + +K SV+ +A +L+ SGGT++++R+ DPR G +K KL GH DN+R + +D G+ V SGSSD IR+WD+ QQ C+ Y + SVWA+ +P VY SGGR + VY TD T ES L+C + VL + L+ D T +W+++T + W E G + AG + A RA+ E V V+ P+F +I G P +++H+++NNRRHVLT+D +V LW++T+ +E + + + EDK++ L E++++ WFT+D LG V L F E+YAVD
Sbjct: 120 TLRRHSDYVICLAAAENNSNIVASGGLGGEVFIWDLDAALAPVAKSVDAKEDEVPNGNSGPALTTLCSINSSSNIASSNGQSH---GYSPIAA----------------------------------------------------KGHKDSVYALAMNDTGTLLLSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRALLVDSTGSWSVFETFKYCLFSSNHLLIVFYNVFRXXLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWALASTPAFGHVY-SGGRDQSVYLTDLSTRESLLLCTNEYPVLQLSLQ-------DDT--------IWVATTDSSVYGWPAEGRTPQKVFEKGA-SFLAGNLSFSRA-----RASLEGSAPVPVY-KEPSF----------------------------VIPGVPAIIQHEIMNNRRHVLTKDTTG---SVKLWEITRGAVIEDFGKVS-FEDKKKELFEMVSIPAWFTMDARLGCLSVHLDTPQCFSAEIYAVD 526
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A7J7H059_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H059_CAMSI) HSP 1 Score: 144 bits (362), Expect = 4.040e-32 Identity = 141/501 (28.14%), Postives = 210/501 (41.92%), Query Frame = 3
Query: 102 TVAGHGDYVKCLTYAEQGS-VLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAAEXXXXXXXXXXXXXXSNSAMVNPTGYS-PAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTI--------------RVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVD 1556
T+ H DYV L A + S V+ SGGL + +WDL+ AP S A E S VN G S P + R + ++L Q+ V + +K SV+ + +L+ SGGT++++R+ DPR G +K KL GH DNVR + +D G R+V+ S + R+WD+ QQ C+ Y + SVWA+ + VY SGGR +Y TD T ES L+C + +L + L +W++++ + W E + G + AG + A RA+ E + V V+ P I G PG+V+H++LNNRRHVLT+D A +V LW++TK VE Y + E+K+ L E++++ WFTVDT LG+ V L F E+Y+ D
Sbjct: 385 TLRQHSDYVTSLAAAPKNSNVVASGGLGGEVFIWDLEAAVAPTSKT---SDATEDDC-------------SNGVNGVGNSVPITSART------------------------ISSNNSISLHMTQSHG---YVPIAAKGHKESVYALGMNDSGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTG-RLVALSCIAMLIWILGFYDQFSFFNRLWDLGQQRCVHSYAVHTDSVWALASNSTFSHVY-SGGRDLSLYLTDLATRESILLCTKEHPILQLALH---------------DDGIWVATSDSSVDKWPVEVRNPQKVFQRGG-SFLAGNLSFSRA-----RASLEGSIPVPVY-----------------------------KEPSVTIPGTPGIVKHEILNNRRHVLTKDTAG---SVKLWEITKGIVVEDYGEVS-FEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSAD 782
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: UPI001C4C6EF9 (LOW QUALITY PROTEIN: WD repeat-containing protein 48-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4C6EF9) HSP 1 Score: 136 bits (342), Expect = 6.190e-30 Identity = 106/356 (29.78%), Postives = 169/356 (47.47%), Query Frame = 3
Query: 513 NKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRV-----VSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKE-RSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVDA 1559
NK S++ +A +++ SG T++++R+ DPR AK+ KL GH DNV+ + ++ GT+V VSGSSDGTIR+W + QQ C+ Y + VWA+Q + VY SGGR +++Y TD R + L+C + VL +EL+ + P ++W+S+T+ + W +L+ ++G E D TP L P +I+G +++ +LN++RH+LT+D NVA WDV KA + E G V D+E + +++ V WF+VD G ++L ES+ F + A DA
Sbjct: 167 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQVSTDLAVSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVY-SGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVSTTKSSVNKW---------SLKGMHNFRSSG--------------------EYDNDCSTPLTP--------------------LCTQPEQVIKGGASIIQCHILNDKRHILTKDTNN---NVAFWDVLKACKGEDL--GKVEFDEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDA 453
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: K1PXR3_CRAGI (WD repeat-containing protein 48 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PXR3_CRAGI) HSP 1 Score: 136 bits (342), Expect = 1.070e-29 Identity = 97/338 (28.70%), Postives = 156/338 (46.15%), Query Frame = 3
Query: 522 SVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGES-SLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVF 1532
S++ +A +++ SG T+ +++ DPR + KL GH DNVR + + + GT+ +SGSSDGTIR+W + QQ C+ + SVWA+Q + VY SGGR +RV+ TD R + +L+C + +L +EL G G + S+W+++T W E + + + D+ + P + P+ ++G P + ++ VLN+R H+LT+D NVALW+V AR VE + E++ + ++I V WFTVD LG + L ES+VF
Sbjct: 170 SIYSLAMNPSGTVLVSGSTENSLKVYDPRD---CVTCLMKLKGHTDNVRALVVSKDGTQCLSGSSDGTIRLWSLGQQRCIATLRVHDDSVWALQANDSFTTVY-SGGRDKRVWATDLRNPDQRTLICEEKAPILKLELIEGDSENISRPGVTD---SLWVATTDSSFRNWSLE------------------------------KVQNQMSGDYDLDTIKPVNTQ-----------------------PLKCVKGNPRIKQYHVLNDRCHILTKDTD---DNVALWNVVTARLVENLGKVN-FEEEIKKRFKMIYVHHWFTVDLKLGLLTIHLDESDVF 443
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A7D8YVH0_9HELO (UBP9-binding protein n=4 Tax=Lachnellula TaxID=47830 RepID=A0A7D8YVH0_9HELO) HSP 1 Score: 136 bits (342), Expect = 1.190e-29 Identity = 137/508 (26.97%), Postives = 207/508 (40.75%), Query Frame = 3
Query: 93 ALATVAGHGDYVKCL-TYAEQGSVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAAEXXXXXXXXXXXXXXSNSAMVNPTGYSPAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLAL-----RSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGG-----EGGGCLLDAPVGL-----------IRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYA 1550
A T+ H DYVKCL T Q + SGGLD+RI LWD+ SGA + ++ + G + KGSV+ ++A+ S++ASGG + ++RL DPR+G +V K GH DN+R + I+E G +++ SSD T++VW V C+ + SVW++ L ++YSG R V +TD R +L M D L + E + G Y +W +++ I W +G + L R +AA+ ++ G E V T +F A A + +G +LD +GL I GQ G+V+HK+LN+RR LT D A +V LWD+ + ++++ + LED E + + AV PW ++DT G V L E N FD E+YA
Sbjct: 133 APQTIGQHADYVKCLATPNSQADWVASGGLDRRICLWDI-------------SGAGK--------------------------------------------------------------KLEIEVGDEE----------KSEKGSVYALSASR--SVLASGGPESIVRLWDPRSG----KRVTKFVGHTDNIRDILINETGDTIMTASSDQTVKVWSVTAGRCMHTLTMHNDSVWSLYSDDPQLGIFYSGDRSGLVVKTDVR---GTLGEMDDGLSLAVAQEHDGVNKVIAHGEY-----IWTATSSSSINRWSNVDTGSEIQLPEAYRRQRASSAASRPRQLSPPTTNGHSQKEIPAQSVLRISNTASFPSAAARDPDTATTISALSAARKGSEIILDPDIGLVVPILSLPEETIEGQHGLVKHKLLNDRRRALTLDTAG---DVLLWDLLRCIPIQSFGKRH-LEDVEPEVNTMEAVAPWCSIDTRTGRLAVVLEEYNCFDAEMYA 537
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A2V1CSQ6_9HELO (WD repeat protein-like protein n=2 Tax=Cadophora TaxID=210567 RepID=A0A2V1CSQ6_9HELO) HSP 1 Score: 132 bits (333), Expect = 1.550e-28 Identity = 131/508 (25.79%), Postives = 211/508 (41.54%), Query Frame = 3
Query: 93 ALATVAGHGDYVKCL-TYAEQGSVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAAEXXXXXXXXXXXXXXSNSAMVNPTGYSPAAAGRQQGRGQQQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSG---RPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVT-----PAFAEDPAEGGGEAGGVGG--EGGGCLLDAPVGLI-----------RGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYA 1550
A T+ H DYVKC+ T Q + SGGLD+RI LWDL SGA + ++ + G + KGSV+ A + S++ASGG + ++RL DPR G +V K GH DN+R + ++E G +++ SSD T++VW V C+ + SVW++ DL V+YS R V +TD R +L M D L + E + G + +W +++ I W +G + L A++A + M ++ + +++++ + ++ PA A A+ + G + ++D +G+I GQ G+V+HK+LN+RR LT D A +V LWD+ + ++++ + LED E + + AV PW ++DT G V L E N FD E+YA
Sbjct: 131 APQTIGQHADYVKCVATAGPQSDWVASGGLDRRICLWDL-------------SGAGK--------------------------------------------------------------KLEIEVGDEE----------KSEKGSVY--ALSVSRSILASGGPESIVRLWDPRTG----KRVTKFVGHTDNIRDILVNESGDTIMTASSDQTVKVWSVTAGRCMHTLTMHNDSVWSLFSDDPDLGVFYSSDRSGLVVKTDVR---GTLGEMDDGLSLAVAHENEGVNKVIACGEH-----IWTATSSSSINRWTNVDTGSEIQLPEAYRHHRASSAASRPMHLSPPISTESSKKEIPSQSILRISNTASFPAPAAREADAATTYSALSGARKASEVIVDPDIGIIVPINALPEETIEGQHGLVKHKLLNDRRRALTLDTAG---DVLLWDLLRCIPIQSFGKKH-LEDVEPEVNTMEAVAPWCSIDTRTGRLAVVLEEYNCFDAEMYA 535
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A6I8RNR1_XENTR (WD repeat-containing protein 48 n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RNR1_XENTR) HSP 1 Score: 130 bits (328), Expect = 3.560e-28 Identity = 101/350 (28.86%), Postives = 164/350 (46.86%), Query Frame = 3
Query: 513 NKGSVHCVAAATDASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSL-VCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFDVTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVDA 1559
NK S++ +A +++ SG T++++R+ DPR K+ KL GH DNV+ + + +SGSSDGTIR+W + QQ C+ Y + VWA+Q + VY SGGR R++Y TD R + L +C + VL +EL+ + P+++W+++T+ + W + G L RS D E D TP + P +I+G +++ +LN++RH+LT+D NVA WDV KA +VE + E++ + +++ V WF+VD G ++L ES+ F + A DA
Sbjct: 170 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CQKLMKLKGHTDNVKALTLLN--AECLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVY-SGGRDRKIYCTDLRNPDIRLLICEEKAPVLKMELDRSA----------DPPLALWVATTKSSVNKWPIK---GILNFRS------------------------SGDYENDCS--TPLSP--------------------ICSQPDQVIKGGASIIQCNILNDKRHILTKDTNN---NVAYWDVLKACKVEDLGKVD-FEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDA 449
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Match: A0A2K6SCP3_SAIBB (WD repeat-containing protein 48 n=1 Tax=Saimiri boliviensis boliviensis TaxID=39432 RepID=A0A2K6SCP3_SAIBB) HSP 1 Score: 130 bits (327), Expect = 4.410e-28 Identity = 97/328 (29.57%), Postives = 156/328 (47.56%), Query Frame = 3
Query: 582 RMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCMTDSEVLDIELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAAAAGAADMAVADGVGDRAAEEDDMEVDVFD-VTPAFAEDPAEGGGEAGGVGGEGGGCLLDAPVGLIRGQPGVVRHKVLNNRRHVLTEDDARPLPNVALWDVTKARQVEAYPRGTVLEDKERSLLEIIAVRPWFTVDTHLGTPLVSLTESNVFDGELYAVDA 1559
+++R+ DPR AK+ KL GH DNV+ + ++ GT+ +SGSSDGTIR+W + QQ C+ Y + VWA+Q + VY SGGR R++Y TD R + L+C + VL +EL+ + P ++W+++T+ + W L+ A+G D + D + +TP L P +I+G +++ +LN++RH+LT+D NVA WDV KA +VE + ED+ + +++ V WF+VD G ++L ES+ F + A DA
Sbjct: 175 KVLRVWDPRT----CAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVY-SGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVATTKSTVNKW---------TLKGIHNFRASG------------------DYDNDCTNPITP-----------------------LCTQPDQVIKGGASIIQCHILNDKRHILTKDTNN---NVAYWDVLKACKVEDLGKVD-FEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDA 433 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12847.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12847.2149.1 >prot_E-fasciculatus_F_contig12847.2149.1 ID=prot_E-fasciculatus_F_contig12847.2149.1|Name=mRNA_E-fasciculatus_F_contig12847.2149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=627bp MHGVQDAATRAGALNRRTSTSPTPPPRPNALATVAGHGDYVKCLTYAEQGback to top mRNA from alignment at E-fasciculatus_F_contig12847:46..3862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12847.2149.1 ID=mRNA_E-fasciculatus_F_contig12847.2149.1|Name=mRNA_E-fasciculatus_F_contig12847.2149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3817bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12847:46..3862+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12847:46..3862+ >mRNA_E-fasciculatus_F_contig12847.2149.1 ID=mRNA_E-fasciculatus_F_contig12847.2149.1|Name=mRNA_E-fasciculatus_F_contig12847.2149.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12847:46..3862+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |