mRNA_E-fasciculatus_F_contig12840.2146.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: D7FLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ7_ECTSI) HSP 1 Score: 244 bits (623), Expect = 4.880e-74 Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 1
Query: 1 GLLKTVVIEGERGQLSGGEEKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAHYLK 381
GLLKTV+IEGERGQ S GE KEREGYSEPPYITRQRCLVLNDWALSLFE GEYEKAVYALDLAI+GDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYT ALEVEPSNWMVKTRLSMAHYLK
Sbjct: 651 GLLKTVIIEGERGQQSQGEGKEREGYSEPPYITRQRCLVLNDWALSLFEFGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTRALEVEPSNWMVKTRLSMAHYLK 777
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A6H5K7M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M7_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.040e-47 Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 1
Query: 1 GLLKTVVIEGERGQLSGGEEKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNR 258
GLLKTV+IEGERGQ S E KEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAI+GDRASALATGGAMESKFFLNR
Sbjct: 80 GLLKTVIIEGERGQQSQAEGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNR 165
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A1V9ZYE2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYE2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.180e-15 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 82 EPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGDRA-SALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAHY 375
E P ITRQR LVLND A++ ++G Y+ A+ A++ AI + A S+ G ++ +F++NRGDCYR + A+ DY ALE++P + + TR++M Y
Sbjct: 292 EHPEITRQRNLVLNDMAIAYVKLGHYDAALTAMNKAIASEMATSSRFDGKVIDYRFYINRGDCYRALSKFQPALADYNTALELQPLDKDIHTRIAMIRY 390
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A485LHM4_9STRA (Aste57867_21000 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHM4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 9.990e-15 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 82 EPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGDRASALATGG-AMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAHY 375
E P ITRQR L+LND A++ + G Y+ A+ A++LAIE + +A G ++ +F++NRGDCYR + A+ DY ALE++P + + TR++M Y
Sbjct: 332 EHPEITRQRNLILNDIAVAEIKRGNYDAALNAMNLAIESEVTTASRFDGRVIDYRFYVNRGDCYRALSKCQPALADYNCALELQPLDAEIHTRIAMIRY 430
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A6G0WXA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXA7_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.860e-14 Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 82 EPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGD--RASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAHY 375
E P IT QR L+LND A+S + G +E A+ A++LAI+ + AS LA G ++ +F++NRGDCYR ++ A+ DY ALE++P + + TR++M Y
Sbjct: 311 EHPEITHQRNLILNDVAVSEIKNGRFEAALNAMNLAIDAEVTMASRLA-GRVIDYRFYVNRGDCYRALSKSQAALVDYNCALELQPMDAEIHTRIAMIRY 409
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: T0SI81_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SI81_SAPDV) HSP 1 Score: 77.4 bits (189), Expect = 4.650e-14 Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 82 EPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIEGD-RASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAHY 375
E P I+RQR L+LND A+ + G++E + A++ AI + S+ G A++ ++++NRGDCYR G + A+ DY A E++P++ + TR++M Y
Sbjct: 291 EHPEISRQRNLILNDMAIMHIQAGDFEAGLTAMNQAIASEIETSSRFEGKAIDYRYYINRGDCYRALGKLQAALADYNTARELQPTDTEIHTRIAMIRY 389
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: C3Z537_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z537_BRAFL) HSP 1 Score: 74.7 bits (182), Expect = 3.900e-13 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 82 EPPYITRQRCLVL--NDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAH 372
+P Y+ QR L+L ND+A+ F+ G Y++A+ L+ AI+G++ E ++NRGDC+ GD A+ DY ALE++P +W V++R+++ H
Sbjct: 257 DPTYMEGQRQLLLTYNDFAVECFQKGFYDEAIILLNKAIKGEKR---------EKGLYINRGDCFFRQGDLHFALADYHQALELDPEDWAVRSRIAVVH 346
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A6P4XZG5_BRABE (uncharacterized protein LOC109463427 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XZG5_BRABE) HSP 1 Score: 74.7 bits (182), Expect = 4.420e-13 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 82 EPPYITRQRCLVL--NDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAH 372
+P Y+ QR L+L ND+A+ F+ G Y++A+ L+ AI+G++ E ++NRGDC+ GD A+ DY ALE++P +W V++R+++ H
Sbjct: 832 DPTYMEGQRQLLLTYNDFAVECFQKGFYDEAIILLNKAIKGEKR---------EKGLYINRGDCFFRQGDLHFALADYHQALELDPEDWAVRSRIAVVH 921
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: A0A8K0ABG4_BRALA (TTC16 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0ABG4_BRALA) HSP 1 Score: 74.7 bits (182), Expect = 4.420e-13 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 82 EPPYITRQRCLVL--NDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAH 372
+P Y+ QR L+L ND+A+ F+ G Y++A+ L+ AI+G++ E ++NRGDC+ GD A+ DY ALE++P +W V++R+++ H
Sbjct: 834 DPTYMEGQRQLLLTYNDFAVECFQKGFYDEAIILLNKAIKGEKR---------EKGLYINRGDCFFRQGDLHFALADYHQALELDPEDWAVRSRIAVVH 923
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Match: UPI0016004B1C (tetratricopeptide repeat protein 16-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016004B1C) HSP 1 Score: 74.7 bits (182), Expect = 4.430e-13 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 82 EPPYITRQRCLVL--NDWALSLFEVGEYEKAVYALDLAIEGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTHALEVEPSNWMVKTRLSMAH 372
+P Y+ QR L+L ND+A+ F+ G Y++A+ L+ AI+G++ E ++NRGDC+ GD A+ DY ALE++P +W V++R+++ H
Sbjct: 842 DPTYMEGQRQLLLTYNDFAVECFQKGFYDEAIILLNKAIKGEKR---------EKGLYINRGDCFFRQGDLHFALADYHQALELDPEDWAVRSRIAVVH 931 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12840.2146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12840.2146.1 >prot_E-fasciculatus_F_contig12840.2146.1 ID=prot_E-fasciculatus_F_contig12840.2146.1|Name=mRNA_E-fasciculatus_F_contig12840.2146.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=127bp GLLKTVVIEGERGQLSGGEEKEREGYSEPPYITRQRCLVLNDWALSLFEVback to top mRNA from alignment at E-fasciculatus_F_contig12840:441..1795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12840.2146.1 ID=mRNA_E-fasciculatus_F_contig12840.2146.1|Name=mRNA_E-fasciculatus_F_contig12840.2146.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1355bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12840:441..1795- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12840:441..1795- >mRNA_E-fasciculatus_F_contig12840.2146.1 ID=mRNA_E-fasciculatus_F_contig12840.2146.1|Name=mRNA_E-fasciculatus_F_contig12840.2146.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12840:441..1795- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |