mRNA_E-fasciculatus_F_contig1282.2132.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1282.2132.1 vs. uniprot
Match: A0A6H5KGB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB1_9PHAE) HSP 1 Score: 591 bits (1524), Expect = 1.810e-203 Identity = 328/384 (85.42%), Postives = 353/384 (91.93%), Query Frame = 1
Query: 1042 SRKEGLAASAAKSKLTQELEAAAARNEELSQTAKDNEREFQAQLDRFMEYPKAAERMAEELEKCEKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKAKAHEMQVVGLRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQAHKYRELAGTRGVQAAQMKSEISSLKATIKTLRLKIEPPAQDSYETEIARLARFNPEVLEIQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLKSPDALRSVAEERVAAVTQTKQPDASNRAETSNNHGWTSNRNDGGRGVKHQAIPVRESETAARLENQSWARRGSGEAGVGSTARVRRTIRMLEDCDWSIKKQRGRETTAIN 2193
S +E +AASAAKS LTQEL+A AARN+EL QTAKD E+EFQAQLDRFMEYPKAAERMAEELE+C+KTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKA+A EMQVV LRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQAHKYRELAG RGVQAAQ+K+EISSLKATIKTLRLK+EPPA DSYETEIARLAR NPEVL+IQQKSGLSKEDMEASM QLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQ+LK+PDALRSVAEERVAA TK+PD S R+ETS+NHGW S++N G RG+K+ A P RE+E A RL NQSWAR GSGEA VGSTARVRRTI+MLE+CDWSI+KQR RET A N
Sbjct: 13 SHEEAIAASAAKSILTQELQATAARNKELCQTAKDKEKEFQAQLDRFMEYPKAAERMAEELERCKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQAHKYRELAGARGVQAAQLKAEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMVQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQMLKTPDALRSVAEERVAAAAPTKRPDNSKRSETSSNHGWISSQNGGSRGIKNHASPDRENEAAPRLANQSWARHGSGEARVGSTARVRRTIKMLENCDWSIEKQRERETNANN 396
BLAST of mRNA_E-fasciculatus_F_contig1282.2132.1 vs. uniprot
Match: D8LEA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA2_ECTSI) HSP 1 Score: 553 bits (1425), Expect = 2.170e-189 Identity = 332/499 (66.53%), Postives = 350/499 (70.14%), Query Frame = 1
Query: 652 VRAKIIAVGKAEMILNEVCLAMARRVGRAEGTQMSDNKGTILMEVHGNPAEFAAQIKKNIAAQLFKWDVDRMDLEASAELAREKAADALQVHETERANLSERTELLEEKIRQMEIEGQRVVAEAESAAKESRKEGLAASAAKSKLTQELEAAAARNEELSQTAKDNEREFQAQLDRFMEYPKAAERMAEELEKCEKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKAKAHEMQVVGLRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQAHKYRELAGTRGVQAAQMKSEISSLKATIKTLRLKIEPPAQDSYETEIARLARFNPEVLEIQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLKSPDALRSVAEERVAAVTQTKQPDASNRAETSNNHGWTSNRNDGGRGVKHQAIPVRESETAARLENQSWARRGSGEAGVGSTARVRRTIRMLEDCD 2148
VRAKIIAVGKAEMILNEV H NPAEFA+QIKKNI AQ KWD+DR+DLEASAELAREKA DA+Q AQLDRFMEYPKAAERMAEELE+C+KTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKA+A EMQVV LRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQ HKYRELAG RGVQAAQMK+EISSLKATIKTLRLK+EPPA DSYETEIARLAR NPEVL+IQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLK+PDALRSVAEERVA TK+PD S RAETS+NHGW + +N GGR SWA++GSGEAGVGSTARVRRTI+MLEDCD
Sbjct: 26 VRAKIIAVGKAEMILNEV---------------------------HRNPAEFASQIKKNIVAQFSKWDIDRVDLEASAELAREKATDAIQ---------------------------------------------------------------------------------AQLDRFMEYPKAAERMAEELERCKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQVHKYRELAGARGVQAAQMKTEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLKTPDALRSVAEERVAGAAPTKRPDNSKRAETSSNHGWMTTQNGGGRXXXXXXXXXXXXXXXXXXXXHSWAQQGSGEAGVGSTARVRRTIKMLEDCD 416 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1282.2132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1282.2132.1 >prot_E-fasciculatus_F_contig1282.2132.1 ID=prot_E-fasciculatus_F_contig1282.2132.1|Name=mRNA_E-fasciculatus_F_contig1282.2132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=743bp MDENEHIESSDEGLRDPSIAAAPPKKGKKKTRPKASKGSKRRPRSANLLTback to top mRNA from alignment at E-fasciculatus_F_contig1282:9216..17027+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1282.2132.1 ID=mRNA_E-fasciculatus_F_contig1282.2132.1|Name=mRNA_E-fasciculatus_F_contig1282.2132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7812bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1282:9216..17027+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1282:9216..17027+ >mRNA_E-fasciculatus_F_contig1282.2132.1 ID=mRNA_E-fasciculatus_F_contig1282.2132.1|Name=mRNA_E-fasciculatus_F_contig1282.2132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4458bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1282:9216..17027+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |