mRNA_E-fasciculatus_F_contig1282.2131.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1282.2131.1
Unique Name	mRNA_E-fasciculatus_F_contig1282.2131.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A6H5JNP1_9PHAE (ENDO3c domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP1_9PHAE)

HSP 1 Score: 762 bits (1967), Expect = 3.820e-271
Identity = 412/500 (82.40%), Postives = 427/500 (85.40%), Query Frame = 1

Query:    4 MQAGTRMARRTRSGFCAVKKEELDDEAFGTDAPSSLPTGTCVVKDEPKSSIIRLAPNTSQGGSTASATSAAGSAHPEPSETSRYFDSSPRVRGSKRKAAASVTGSAGGSCATGGRSSRLRGASDGTRRASRLSATPPSAITAVYAVGAQRRSSGRLNAAKKEELTSALELPEPSPSGAKRRAKGDASTNGDRKPPRRRAVAATKEEVCVQASEEGKGXXXXXXXXXXXTEKGEGVRERVIPPRLAEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALGELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFKMKLEDS 1503
            ++ GTRMARRTR GFCAVKKEELDDE FGTD P S  TGTC +K E KSSI R  PNT++GGS   ATSA GS   EP ETSRYFDSS  VRG KRK AASVTG A GSC TG +S R RG  DGT +AS+LSAT PSA T   AVGA+RRSS  LNA KKEELTSALELPEPSPS AKRR KGD ST GD KP RRRA  A K EVCVQASEEGKG            EK   VRER IPPRLAEKAALIIQ+MD+LYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAP+PQSLSKMA EDLQQIIRSVGLAPTKAKHLIALSQQILDR+DGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRW LTKNEKNASKVEEDLMA+FPR SWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKAL ELTCLNDYLASPTPTKKSSKNAIVYSER LEMEQF+MKLEDS
Sbjct:   70 LEVGTRMARRTRFGFCAVKKEELDDELFGTDTPPS--TGTCAIKGELKSSIRRQTPNTNRGGSKTPATSAGGSGR-EPPETSRYFDSSLPVRGRKRKVAASVTGPAEGSCTTGSKSRRHRGTGDGTGKASKLSATSPSATTGFCAVGARRRSSRTLNAVKKEELTSALELPEPSPSDAKRRTKGDTSTIGDCKPLRRRAAVAAKGEVCVQASEEGKGKKKARTKAKANIEKRGEVRERAIPPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAQEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWELTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALAELTCLNDYLASPTPTKKSSKNAIVYSERMLEMEQFRMKLEDS 566

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: D8LEA3_ECTSI (Putative endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA3_ECTSI)

HSP 1 Score: 736 bits (1901), Expect = 6.070e-262
Identity = 388/456 (85.09%), Postives = 402/456 (88.16%), Query Frame = 1

Query:  136 DEPKSSIIRLAPNTSQGGSTASATSAAGSAHPEPSETSRYFDSSPRVRGSKRKAAASVTGSAGGSCATGGRSSRLRGASDGTRRASRLSATPPSAITAVYAVGAQRRSSGRLNAAKKEELTSALELPEPSPSGAKRRAKGDASTNGDRKPPRRRAVAATKEEVCVQASEEGKGXXXXXXXXXXXTEKGEGVRERVIPPRLAEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALGELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFKMKLEDS 1503
            DEPKSSI R  PN +QGGST  ATSA GS  PEPSETS YFDSSP VRG KRKAAASV G AGGSC TGG+S R RGA D T +  +LSAT PSA T V A G QRRSSGRLNA KKEELTSALELPEP PS AKRR KGDASTNGD KP RRRA  ATK EVC QASEEGKG            EKGEGVRER +PPRLAEKAALIIQ+MD+LYPDPPIPINH+DSFTLLCGVLLSAQTTDAQVNLVTQELFRVAP+PQSLSKMAHEDLQ+ IRSVGLAPTKAKHLIALSQQILDR+DGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMA+FPR SWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKAL +LTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQF+MKLEDS
Sbjct:   59 DEPKSSIRRQTPNANQGGSTTFATSAGGSGDPEPSETSHYFDSSPPVRGRKRKAAASVAGPAGGSCTTGGKSRRHRGAGDATGKYPKLSATSPSATTGVCAAGTQRRSSGRLNAVKKEELTSALELPEPPPSDAKRRTKGDASTNGDCKPRRRRAAVATKGEVCAQASEEGKGKKKARTKAKTKIEKGEGVRERAVPPRLAEKAALIIQIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQRTIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALAQLTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLEDS 514

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A835ZEQ0_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ0_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.530e-84
Identity = 129/201 (64.18%), Postives = 158/201 (78.61%), Query Frame = 1

Query:  760 QVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGS 1362
            QV+D LYP+PP+P+NH D FTLLC VLLSAQTTD +VN VT ELF  AP P++L+ M+H D+  IIR+VGLAPTKA+HLIA +QQ+ +R+ G VP+T E LQ+LPGVGRKTA+VVM  AF  PAFPVDTHIHRLALRW L+++E N  +VE DL AL+P  ++ +LHLQFIYFGRE+CQAR H  S CP+CSW     P S
Sbjct:    3 QVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTS 203

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A356FBE6_9BACT (Endonuclease III n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FBE6_9BACT)

HSP 1 Score: 265 bits (676), Expect = 2.270e-81
Identity = 128/201 (63.68%), Postives = 153/201 (76.12%), Query Frame = 1

Query:  739 EKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            EKA  I  ++DELY DPPIP++H D +TLL  VLLSAQTTD +VNLVT ELFR AP P+ + K+  E++  IIR+ GLAP KA+++ ALSQ +LD + G+VP   E L++LPGVG KTA+VVM+QAF  PAFPVDTHIHRLA RWGL+ N KN  K E DL A+FPR SWAKLHLQ IYFGREHC A  HD + CPICSW 
Sbjct:    5 EKAEKIHAILDELYEDPPIPLDHKDPYTLLVSVLLSAQTTDKRVNLVTPELFRRAPTPRKMVKLTVEEILAIIRTCGLAPGKARNIHALSQILLDEHGGRVPADMEKLEALPGVGHKTASVVMIQAFEQPAFPVDTHIHRLAARWGLS-NGKNVEKTERDLKAVFPRESWAKLHLQIIYFGREHCPALFHDLTECPICSWA 204

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A3A5WA12_9ARCH (Endonuclease III n=2 Tax=Archaea TaxID=2157 RepID=A0A3A5WA12_9ARCH)

HSP 1 Score: 264 bits (674), Expect = 3.440e-81
Identity = 121/202 (59.90%), Postives = 158/202 (78.22%), Query Frame = 1

Query:  736 AEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            +EKA++I+++++E YP+ P+P++H + F LL  VL+SAQTTD +VN VT ELFR  PD QS+SK++ E +Q IIR VGLAPTKA+++  LS+ ++D Y+G++P TFEGL+ LPGVG KTA VVM QAF  PAFP+DTHIHRLA RWGL+ N  N  K E+DL A+FP+ SW KLHLQ I+FGRE+C AR HD + CPICSW 
Sbjct:    4 SEKASIILEMLEEYYPETPVPLDHENPFQLLVAVLMSAQTTDKKVNQVTPELFRQGPDAQSMSKLSPETIQGIIREVGLAPTKARNISKLSKILVDSYEGQIPNTFEGLEGLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLS-NGTNVVKTEKDLKAIFPKESWNKLHLQIIFFGREYCPARNHDLTKCPICSWA 204

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A2E6C705_9EURY (Endonuclease III n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6C705_9EURY)

HSP 1 Score: 257 bits (656), Expect = 1.620e-78
Identity = 120/202 (59.41%), Postives = 152/202 (75.25%), Query Frame = 1

Query:  736 AEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            +EKA  I+Q++ E YP+ P+P+ H   F LL  VL+SAQTTD +VN VT ELFR  PD + ++K+  E +Q+IIR VGLAPTKAK++  L+Q +++ YD ++P TFEGL+SLPGVG KTA VVM QAF  PAFP+DTHIHRLA RWGL+ N  N  K E+DL A+FP+ SW KLHLQ I+FGRE+C AR HD + CPICSW 
Sbjct:    4 SEKAPRILQMLXEFYPETPVPLXHETPFQLLIAVLMSAQTTDKKVNEVTPELFRRGPDAEXMAKLTPETIQKIIREVGLAPTKAKNISKLAQILVESYDSEIPNTFEGLESLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLS-NGTNVVKTEKDLKAIFPKESWNKLHLQIIFFGREYCPARNHDLTKCPICSWA 204

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BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A2E6NQE6_9BACT (Endonuclease III n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6NQE6_9BACT)

HSP 1 Score: 257 bits (656), Expect = 2.120e-78
Identity = 124/201 (61.69%), Postives = 153/201 (76.12%), Query Frame = 1

Query:  739 EKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            EKA  I  ++DELY +PPIP+ H D +TLL  VLLSAQTTD +VN+VT ELFR AP P+ + K+  +++  IIR+ GLAP KA+++ ALS+ +L+ + GKVP   E L++LPGVG KTA+VVM+QAF+ PAFPVDTHIHRLA RWGL+ N KN  K E DL A+FP  SWAKLHLQ IYFGREHC AR HD + CPICSW 
Sbjct:    5 EKAVKIHAILDELYKNPPIPLVHKDPYTLLVSVLLSAQTTDKRVNMVTPELFRRAPTPRKMVKLDVDEILGIIRTCGLAPGKARNIHALSRILLEEHGGKVPADMEKLEALPGVGHKTASVVMIQAFDRPAFPVDTHIHRLAARWGLS-NGKNVEKTERDLKAVFPERSWAKLHLQIIYFGREHCPARGHDLAQCPICSWA 204

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A2E3FQM8_9EURY (Endonuclease III n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E3FQM8_9EURY)

HSP 1 Score: 254 bits (650), Expect = 1.260e-77
Identity = 117/202 (57.92%), Postives = 153/202 (75.74%), Query Frame = 1

Query:  736 AEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            +EKA +I+++++E YP+ P+P++H   F LL  VL+SAQTTD +VN VT ELFR  PD ++++ ++ + +Q IIR VGLAPTKAK++  LS  + D Y G++P TFEGL+SLPGVG KTA VVM QAF  PAFP+DTHIHRLA RWGL+ N  N  + E+DL A+FP+ SW KLHLQ I+FGRE+C AR HD + CPICSW 
Sbjct:    4 SEKAEIILKMLEEYYPETPVPLDHETPFQLLIAVLMSAQTTDKKVNEVTPELFRQGPDAKAMANLSPQKIQTIIREVGLAPTKAKNIFKLSNILCDDYGGEIPDTFEGLESLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLS-NGTNVVRTEKDLKAIFPKESWNKLHLQIIFFGREYCPARNHDLTKCPICSWA 204

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A7V5RM63_9BACT (Endonuclease III n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5RM63_9BACT)

HSP 1 Score: 254 bits (648), Expect = 1.720e-77
Identity = 121/202 (59.90%), Postives = 153/202 (75.74%), Query Frame = 1

Query:  736 AEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            AEKA LI++ +DELYP PPIP++H D FTLL  V+LSAQTTDA VN VT ELF  APDP+ LS+M  E++ QII+  GLAP+KAK L  L++ +++++  +VPQ+FE L++LPGVG KTA+VVM QAF  PAFPVDTHIHRLA RWGL+   K+  + E DL  +FP+  W KLHLQ IYFGRE+C AR HD   CP+CS +
Sbjct:    4 AEKARLIMKTLDELYPQPPIPLHHSDPFTLLVSVVLSAQTTDAMVNRVTPELFERAPDPEKLSQMTEEEILQIIKPCGLAPSKAKALRGLAKILVEKHASRVPQSFEELEALPGVGHKTASVVMAQAFGIPAFPVDTHIHRLAARWGLSSG-KSVVQTERDLKRIFPKEHWNKLHLQIIYFGREYCPARNHDPQKCPLCSKI 204

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Match: A0A6N2D4Y0_9DELT (Endonuclease III n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D4Y0_9DELT)

HSP 1 Score: 254 bits (648), Expect = 3.250e-77
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 1

Query:  736 AEKAALIIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWV 1341
            AEKA  I   ++ELYP+ PIP++H+D FTLL  VLLSAQTTD +VN VT  LF VAP P+ +  +  ED++++IR +GLAP KAK L  L +Q+++ + G+VP +FE L++LPGVG KTA+VVM QAF  PAFPVDTHIHRLA RWGL+   ++  K E DL  +FPR SW +LHLQ I+FGREHC AR HD SACPICSW 
Sbjct:    4 AEKADRIRMQLEELYPETPIPLDHVDPFTLLVAVLLSAQTTDRKVNEVTPRLFAVAPTPERMMALEMEDIRELIRELGLAPQKAKALYGLCRQLVETHGGEVPVSFEALEALPGVGHKTASVVMAQAFGVPAFPVDTHIHRLAARWGLSDG-RSVEKTERDLKRVFPRESWNRLHLQIIFFGREHCPARYHDLSACPICSWA 204

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1282.2131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JNP1_9PHAE	3.820e-271	82.40	ENDO3c domain-containing protein n=1 Tax=Ectocarpu...	[more]
D8LEA3_ECTSI	6.070e-262	85.09	Putative endonuclease n=1 Tax=Ectocarpus siliculos...	[more]
A0A835ZEQ0_9STRA	1.530e-84	64.18	DNA glycosylase (Fragment) n=1 Tax=Tribonema minus...	[more]
A0A356FBE6_9BACT	2.270e-81	63.68	Endonuclease III n=1 Tax=Planctomycetes bacterium ...	[more]
A0A3A5WA12_9ARCH	3.440e-81	59.90	Endonuclease III n=2 Tax=Archaea TaxID=2157 RepID=...	[more]
A0A2E6C705_9EURY	1.620e-78	59.41	Endonuclease III n=1 Tax=Euryarchaeota archaeon Ta...	[more]
A0A2E6NQE6_9BACT	2.120e-78	61.69	Endonuclease III n=1 Tax=Planctomycetes bacterium ...	[more]
A0A2E3FQM8_9EURY	1.260e-77	57.92	Endonuclease III n=1 Tax=Euryarchaeota archaeon Ta...	[more]
A0A7V5RM63_9BACT	1.720e-77	59.90	Endonuclease III n=1 Tax=Bacteroidetes bacterium T...	[more]
A0A6N2D4Y0_9DELT	3.250e-77	59.41	Endonuclease III n=1 Tax=Deltaproteobacteria bacte...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1282	contig	E-fasciculatus_F_contig1282:2597..7671 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	742.3
Seed ortholog evalue	1.5e-211
Seed eggNOG ortholog	2880.D8LEA3
Preferred name	NTH1
KEGG ko	ko:K10773
KEGG Pathway	ko03410,map03410
EggNOG free text desc.	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
EggNOG OGs	COG0177@1,KOG1921@2759
EC	4.2.99.18
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03400
Hectar predicted targeting category	other localisation
Ec32 ortholog description	DNA glycosylase
Ec32 ortholog	Ec-00_001490.1
Exons	9
Model size	1855
Cds size	1503
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927787.1526098-UTR-E-fasciculatus_F_contig1282:2596..2945	1622927787.1526098-UTR-E-fasciculatus_F_contig1282:2596..2945	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1282 2597..2945 -
1695995693.835965-UTR-E-fasciculatus_F_contig1282:2596..2945	1695995693.835965-UTR-E-fasciculatus_F_contig1282:2596..2945	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1282 2597..2945 -
1622927787.2672827-UTR-E-fasciculatus_F_contig1282:7668..7671	1622927787.2672827-UTR-E-fasciculatus_F_contig1282:7668..7671	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1282 7669..7671 -
1695995693.9462218-UTR-E-fasciculatus_F_contig1282:7668..7671	1695995693.9462218-UTR-E-fasciculatus_F_contig1282:7668..7671	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1282 7669..7671 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1282.2131.1	prot_E-fasciculatus_F_contig1282.2131.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1282 2946..7668 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1282:2597..7671-
coding sequence from alignment at E-fasciculatus_F_contig1282:2597..7671-

protein sequence of mRNA_E-fasciculatus_F_contig1282.2131.1

>prot_E-fasciculatus_F_contig1282.2131.1 ID=prot_E-fasciculatus_F_contig1282.2131.1|Name=mRNA_E-fasciculatus_F_contig1282.2131.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=501bp
MQAGTRMARRTRSGFCAVKKEELDDEAFGTDAPSSLPTGTCVVKDEPKSS
IIRLAPNTSQGGSTASATSAAGSAHPEPSETSRYFDSSPRVRGSKRKAAA
SVTGSAGGSCATGGRSSRLRGASDGTRRASRLSATPPSAITAVYAVGAQR
RSSGRLNAAKKEELTSALELPEPSPSGAKRRAKGDASTNGDRKPPRRRAV
AATKEEVCVQASEEGKGKKKPRTKAKAKTEKGEGVRERVIPPRLAEKAAL
IIQVMDELYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVA
PDPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRYDGKVPQTF
EGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNAS
KVEEDLMALFPRYSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTG
PGSPKALGELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFKMKLEDS
*

mRNA from alignment at E-fasciculatus_F_contig1282:2597..7671-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1282.2131.1 ID=mRNA_E-fasciculatus_F_contig1282.2131.1|Name=mRNA_E-fasciculatus_F_contig1282.2131.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5075bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1282:2597..7671- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCATGCAAGCAGGCACACGTATGGCTCGGCGCACGCGATCCGGGTTCTG
TGCTGTCAAGAAGGAAGAGCTCGATGACGAGGCATTCGGCACCGACGCCC
CCTCCTCACTGCCAACGGGAACATGTGTAGTCAAAGACGAGCCCAAGTCA
TCGATCATAAGGCTAGCGCCGAACACAAGCCAAGGCGGCTCGACGGCTTC
CGCAACCTCCGCCGCAGGCAGCGCTCATCCTGAACCCTCTGAGACTTCTC
GCTATTTTGATTCTTCCCCGCGTGTGAGAGGGAGCAAGCGGAAGGCGGCA
GCAAGTGTCACCGGCTCCGCCGGCGGTAGCTGTGCGACGGGCGGCAGGAG
CAGCCGCCTTCGAGGTGCCAGCGATGGCACCCGAAGAGCTTCGAGGCTGT
CTGCCACACCCCCGAGCGCGATAACCGCCGTTTACGCGGTGGGCGCCCAA
CGCCGGAGTAGCGGCAGACTCAACGCGGCGAAGAAAGAGGAGCTGACAAG
CGCGCTCGAACTCCCAGAGCCATCTCCGTCAGGTGCCAAGCGGAGGGCGA
AAGGCGATGCCTCCACGAACGGGGATCGCAAACCCCCGAGGAGGCGGGCT
GTGGCCGCTACCAAGGAGGAGGTTTGCGTGCAGGCTTCCGAGGAGGGAAA
GGGGAAGAAGAAGCCCCGGACGAAGGCCAAAGCCAAGACCGAAAAGGGGG
AAGGTGTTCGGGAAAGGGTTATTCCGCCGCGCTTGGCGGAGAAGGCGGCG
CTGATAATCCAGGTTATGGACGAGCTTTACCCGGACCCGCCTATACCGAT
CAACCACCTGGTGAGGAGTACCACGTATATGTCCCGCAGCACACAGTGAT
TTGTCGAGATGCACGCGGGGGTGCCTTGATCTAGAGCAATGTGGCAGGCG
CGATCGACAACTCGTAAGACAGCCCTTGTTGAGGAGGAGGTGCTTGTGTT
GCTCGGGAAGGCTAAGTCACGTCGAATACCACGGAAGTTTTTAGCCACAA
GTTGGTAGGGTACCTGAGACGTACTCTATAACCGAGAATTTGATGTGCTG
TGTGCGCCACTCATGTATCATCCTGCCGTATCATTTGCTAGCACTTCTTC
TGCCGTGCCCTGCTTACCCATTACCGTTTTGATCACTCTCCTGTTCCGAG
CGCAGGACAGCTTCACGTTGCTTTGCGGGGTGCTACTCTCTGCTCAGACC
ACCGATGCTCAGGTACGCCGCGTGCTCGGCTCTTTAGCCTCTTAGGATTC
GGTACTTTTTCTTAACACGCAGTGTGAAGACTTGAACGCATTCCTTCCAT
CGAGGTATTTTCTCAGGCGGGCAATGTTTCTGTGATTGTATGAAGTTTAT
GTTCCAAGAAGAAACCGAGACACAATTTCTCTTGCTACTTGCGGATAACT
AGACTCCCACGGGAGAGCCCCCTTGCTCGTGGCGGTGAGCAGTGGCTTCT
GTGTGGGTTTTAAATGTCACCATGGGTCATGTGACAGACCCTCTATTTTG
GGCTTACGATGCGTCAGATGCCTTGCTATATAGACGAGACGTTGCTCTTC
GTGTTGGCGAACGTTTCACCCCGCTTGCACTCTTCCTCTGGCACTTGTTC
ATTGGCAATGCGGTGTATTATGGATTCGTCCTTGACCTTGCTGCGATCAC
ACACCGCACCGATTAGGTTAACCTGGTGACGCAGGAGCTGTTCAGGGTGG
CGCCGGATCCGCAGTCCTTGTCCAAGATGGCACATGAGGATCTGCAACAG
ATAATCAGGTACAGATATAACGCTGCCGTGCACTTTTCGCGCAGCGCTTT
GTTAACGTCCGGTCTTGCCGACTGGGGTGGAAATTTCTTTGACGAATTTA
CATGAACGACACCGATAGATACGACTATTAATAGCGACGAATTTCGATGG
CACGATGGCAGAAATGCCGGGTCAGATGGCACGGGCACATATTTTCATAT
TTTCAAACTTTCGATTGGATCTCACTGCTACATTGATTTGCACCGTATTG
ACACAGCACGTTTGTTGGTTTGTTTGGAACGACGGAGTTTGCCGTGTGTT
TTGACTTGGTGCCTGTTGCGCCGCCGCCACTTGATTGCCAGATCCGTCGG
ACTTGCACCTACCAAGGCGAAGCATCTAATCGCGCTGTCGCAGCAGATAC
TAGACCGCTACGACGGCAAGGTGCCCCAGACCTTCGAAGGCCTCCAGAGT
CTGCCCGGCGTCGGTACGTGGTGGTTCGTTCCAGATTTTGGGATAGGTTG
TCCCTGTAAATGTTGTTACGAGTTTCGGGTGTTTGGGTGTTTGGTAAACC
GTTCATCGGAGTGGGAGTGTGCGGACACTCATTGTTCTTTGTTCTTTTGT
CGGCAAGCTCCTGCTACGAAGGCTGCTCCTGCTACTCCTACCCCGCTGGA
CCTCCTACACGTTACGGCCCACGCTGACGTCTAACCTGGTATCGAATCAA
TGGACTATCGCCATGTTTGCGATTCATTCGCGTGAGCTTTTCCCTTGAGC
GCTCTGGTGGGCTCAATTTTACGGCTGGAGAATGGCTCATCTGGATAAAT
TCGCCTCGTACGATCAAATAATCTTGGCTCAACTGGATAAATTCGCCTCG
TACGATCAAAGAATCTTCCCCACACTCAAAGCTCTCGAACACCGTTGACC
GCTCAACGGTGACGACATTTCCATGATGAATCCGTCGTAAACGCCATACC
GACCCAGGGCGCAAAACTGCAGCGGTGGTGATGGTCCAGGCCTTCAACAC
CCCCGCCTTTCCTGTGGACACACACATTCACCGATTGGCCCTTCGCTGGG
GTCTGACGAAGAACGAAAAGAACGCCAGCAAGTGAGAGGCGTAGACGCCC
ATCAAATCAAACTGCGTGTTCTTACTGTTAGCGCAACGTGTTGTTGAGGG
ACGGTTTCATGGTTATTTTGTCGCTGAGTTAGATCGAGGCCGTTTTCAAA
CGGTGCTTGCCGTTGGTGCAACGCGTTGTTGAGGGTTTGTTTCATGGTTG
ATTCTTGTTCAGTTTGATGAATTGAGGCTGTACCCGGCTATCATTGCGGA
TGTGAAACCTGCTGCCCCACCCCCTCGCTTTTTACGCCCCACCGCACATC
CGTACCTAACCTCACGCTCTTTTGTGAAGGGTGGAAGAGGACCTTATGGC
CCTGTTCCCAAGATACTCGTGGGCCAAGTTGCACCTTCAGTTCATCTACT
TCGGCCGTGAGCACTGCCAGGTGACGCAAAAGGAAACCACATGGAGTAGC
GCACGTTTGATTGTGTCAGTCACGAGCGCGCGCGTGAAGAGAAGACTTCG
CAGTGTTGGCTTCATCAACTGCTCCCATTTATCCCATCGCAGCCGCCGAG
GTGGTGTAAACAACGGCTGAATCCAAACGACGGCTCCCCCGCATACCTAG
GAGAGGGCGGGTGTAGGCCTGACGGAAAGCGGAACCCTTTCCATTTCGAA
GTTTATCGTAACGATTCACGTGCACGGCGTTTGACGTCGAAGGTGCGAAA
AATATTACGCCCCCCGCTCGATCGATTCTACGAGGCTCGACGAGATAACC
TGCTGCCCTTGGCCCGATGGTGACTTGACTCTCTTTTCGTCCGGAATTTT
CAGGCTCGCGTGCACGACGCTTCGGCCTGCCCCATCTGCTCTTGGGTGAA
GAAGGTACGGCTCTCTGGGACCGTGATATGGTAGTGGTGGCCATGCTGTC
GTCGTTATGTGGCTGGCGTCTCGTTGTCTCTTTTCATTCCACAGAGTGAA
TCCAGCAATGTCCTGCCGTCCAGGGCAGGGACCTGCTCTTTGCAGTAGTA
TGCTTTGCTTGCTCCTTCAGCGTCTTGGATTTGGTGGATTGCGTGCATGT
CTGGCTAACCTAAGGCTAACACGAGTTCGTACATCGTGGTTAATGGCGCG
TGTGCGTGTTTTGATCTCTCTTCCTGTCTTTTCGTAGACTGGACCTGGCT
CCCCCAAGGCGTTGGGCGAGCTGACCTGCCTGAACGACTACTTGGCATCC
CCTACTCCCACCAAGAAGTCTAGCAAGAATGCTATCGTCTACAGCGAGAG
GAAGCTAGAGATGGAACAGGTACATATTCTGCTCCTGCGTGGGGCGCGTT
GTATGCAGCATCTCTTTGCCTGTTTTGGGCGCTGGTCGAAAGGGAGATGT
CGCACTCCACCTACCAGGAAGTTCGTGAGGAAGGGTTTCGTTCGGGTGTA
GTGTTAGTTTTTCGAATGCAATCTCTATGCGATCGCTTCAAGGCTGGTTG
TGAATCCCTAGCAATTCACTGCTTCAGTCCAGCAGAGGTTGTCGAGAGTC
AAGCCATGAGACCCAGAGTGTGCGTGTTTTCACTCAAGGCAAATTTCACG
TGTCTTCGATGTTGTTGCACAGCTTTTGGTGCTCGTCTGCATCACGCCAA
ACCCTCCTCCCACGTTAGGAAGTACGTCGATCATTTTCCACGCCTCGTAG
GAATTGTGCAAGATAGATGCGCAGCCGCAAGCGGAACCGGCACATGGTTA
GCACAAGGGGAGGGATTCATTCTGCCTCACATTTTTTAGTGCGGCAGAGT
GATAAAATACGTTTCTCGTGTATGCGAAATGTCCCGAATTTTCAATCCGC
AGCATCTTTTTGCCGTGGAGGTTATTTGTGAAACTTCGTTTGCTGAAGCA
TCTACGTTTGTCTCGTCTGTTGGCTTCGGTGCGTTGTTCGGCCGTGCAGT
TCAAAATGAAACTGGAAGACAGCTGAGTTGGCACCGACTGAGGGAGGCCA
GCGGCACAAGCGACCCTCAGACCTGTGCGGGACCAGAGGACGGTGCTTCG
TGGAAACAGCTACCGTGCGAGGGTGCTCATACATGAACCTGGTTGAGGAC
CGACTCGGAAAATATGCGTTTCTTGTTCAGGCGTGGAGATCAGCCGTCGT
GTTTGAGTGATAGTTTACTCTCACCGGATTGTTTACGAAGCGGGTGGGAG
TCTGATGGACGCGGGGCTTGAGCACAGATCGGTTGTTACCTTTGCCGCAC
TGTACGCTCCAAAGAGCCATCTCACGATGGATTCGTTTTCTACCAGGCAT
CATAAATTCAAATCACTTTTCTTGC

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1282:2597..7671-

>mRNA_E-fasciculatus_F_contig1282.2131.1 ID=mRNA_E-fasciculatus_F_contig1282.2131.1|Name=mRNA_E-fasciculatus_F_contig1282.2131.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3006bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1282:2597..7671- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAAGCAGGCACACGTATGGCTCGGCGCACGCGATCCGGGTTCTGTGC
TGTCAAGAAGGAAGAGCTCGATGACGAGGCATTCGGCACCGACGCCCCCT
CCTCACTGCCAACGGGAACATGTGTAGTCAAAGACGAGCCCAAGTCATCG
ATCATAAGGCTAGCGCCGAACACAAGCCAAGGCGGCTCGACGGCTTCCGC
AACCTCCGCCGCAGGCAGCGCTCATCCTGAACCCTCTGAGACTTCTCGCT
ATTTTGATTCTTCCCCGCGTGTGAGAGGGAGCAAGCGGAAGGCGGCAGCA
AGTGTCACCGGCTCCGCCGGCGGTAGCTGTGCGACGGGCGGCAGGAGCAG
CCGCCTTCGAGGTGCCAGCGATGGCACCCGAAGAGCTTCGAGGCTGTCTG
CCACACCCCCGAGCGCGATAACCGCCGTTTACGCGGTGGGCGCCCAACGC
CGGAGTAGCGGCAGACTCAACGCGGCGAAGAAAGAGGAGCTGACAAGCGC
GCTCGAACTCCCAGAGCCATCTCCGTCAGGTGCCAAGCGGAGGGCGAAAG
GCGATGCCTCCACGAACGGGGATCGCAAACCCCCGAGGAGGCGGGCTGTG
GCCGCTACCAAGGAGGAGGTTTGCGTGCAGGCTTCCGAGGAGGGAAAGGG
GAAGAAGAAGCCCCGGACGAAGGCCAAAGCCAAGACCGAAAAGGGGGAAG
GTGTTCGGGAAAGGGTTATTCCGCCGCGCTTGGCGGAGAAGGCGGCGCTG
ATAATCCAGGTTATGGACGAGCTTTACCCGGACCCGCCTATACCGATCAA
CCACCTGATGCAAGCAGGCACACGTATGGCTCGGCGCACGCGATCCGGGT
TCTGTGCTGTCAAGAAGGAAGAGCTCGATGACGAGGCATTCGGCACCGAC
GCCCCCTCCTCACTGCCAACGGGAACATGTGTAGTCAAAGACGAGCCCAA
GTCATCGATCATAAGGCTAGCGCCGAACACAAGCCAAGGCGGCTCGACGG
CTTCCGCAACCTCCGCCGCAGGCAGCGCTCATCCTGAACCCTCTGAGACT
TCTCGCTATTTTGATTCTTCCCCGCGTGTGAGAGGGAGCAAGCGGAAGGC
GGCAGCAAGTGTCACCGGCTCCGCCGGCGGTAGCTGTGCGACGGGCGGCA
GGAGCAGCCGCCTTCGAGGTGCCAGCGATGGCACCCGAAGAGCTTCGAGG
CTGTCTGCCACACCCCCGAGCGCGATAACCGCCGTTTACGCGGTGGGCGC
CCAACGCCGGAGTAGCGGCAGACTCAACGCGGCGAAGAAAGAGGAGCTGA
CAAGCGCGCTCGAACTCCCAGAGCCATCTCCGTCAGGTGCCAAGCGGAGG
GCGAAAGGCGATGCCTCCACGAACGGGGATCGCAAACCCCCGAGGAGGCG
GGCTGTGGCCGCTACCAAGGAGGAGGTTTGCGTGCAGGCTTCCGAGGAGG
GAAAGGGGAAGAAGAAGCCCCGGACGAAGGCCAAAGCCAAGACCGAAAAG
GGGGAAGGTGTTCGGGAAAGGGTTATTCCGCCGCGCTTGGCGGAGAAGGC
GGCGCTGATAATCCAGGTTATGGACGAGCTTTACCCGGACCCGCCTATAC
CGATCAACCACCTGGACAGCTTCACGTTGCTTTGCGGGGTGCTACTCTCT
GCTCAGACCACCGATGCTCAGGACAGCTTCACGTTGCTTTGCGGGGTGCT
ACTCTCTGCTCAGACCACCGATGCTCAGGTTAACCTGGTGACGCAGGAGC
TGTTCAGGGTGGCGCCGGATCCGCAGTCCTTGTCCAAGATGGCACATGAG
GATCTGCAACAGATAATCAGGTTAACCTGGTGACGCAGGAGCTGTTCAGG
GTGGCGCCGGATCCGCAGTCCTTGTCCAAGATGGCACATGAGGATCTGCA
ACAGATAATCAGATCCGTCGGACTTGCACCTACCAAGGCGAAGCATCTAA
TCGCGCTGTCGCAGCAGATACTAGACCGCTACGACGGCAAGGTGCCCCAG
ACCTTCGAAGGCCTCCAGAGTCTGCCCGGCGTCGATCCGTCGGACTTGCA
CCTACCAAGGCGAAGCATCTAATCGCGCTGTCGCAGCAGATACTAGACCG
CTACGACGGCAAGGTGCCCCAGACCTTCGAAGGCCTCCAGAGTCTGCCCG
GCGTCGGGCGCAAAACTGCAGCGGTGGTGATGGTCCAGGCCTTCAACACC
CCCGCCTTTCCTGTGGACACACACATTCACCGATTGGCCCTTCGCTGGGG
TCTGACGAAGAACGAAAAGAACGCCAGCAAGGCGCAAAACTGCAGCGGTG
GTGATGGTCCAGGCCTTCAACACCCCCGCCTTTCCTGTGGACACACACAT
TCACCGATTGGCCCTTCGCTGGGGTCTGACGAAGAACGAAAAGAACGCCA
GCAAGGTGGAAGAGGACCTTATGGCCCTGTTCCCAAGATACTCGTGGGCC
AAGTTGCACCTTCAGTTCATCTACTTCGGCCGTGAGCACTGCCAGGGTGG
AAGAGGACCTTATGGCCCTGTTCCCAAGATACTCGTGGGCCAAGTTGCAC
CTTCAGTTCATCTACTTCGGCCGTGAGCACTGCCAGGCTCGCGTGCACGA
CGCTTCGGCCTGCCCCATCTGCTCTTGGGTGAAGAAGGCTCGCGTGCACG
ACGCTTCGGCCTGCCCCATCTGCTCTTGGGTGAAGAAGACTGGACCTGGC
TCCCCCAAGGCGTTGGGCGAGCTGACCTGCCTGAACGACTACTTGGCATC
CCCTACTCCCACCAAGAAGTCTAGCAAGAATGCTATCGTCTACAGCGAGA
GGAAGCTAGAGATGGAACAGACTGGACCTGGCTCCCCCAAGGCGTTGGGC
GAGCTGACCTGCCTGAACGACTACTTGGCATCCCCTACTCCCACCAAGAA
GTCTAGCAAGAATGCTATCGTCTACAGCGAGAGGAAGCTAGAGATGGAAC
AGTTCAAAATGAAACTGGAAGACAGCTGATTCAAAATGAAACTGGAAGAC
AGCTGA