prot_E-fasciculatus_F_contig12811.2128.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12811.2128.1
Unique Nameprot_E-fasciculatus_F_contig12811.2128.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length77
Homology
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A6H5JSP3_9PHAE (DHO_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP3_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.580e-44
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRKASRK 76
            VPLIGVGGVGTGQ+AYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTS+AEAVGSDHRPPRK SRK
Sbjct:   62 VPLIGVGGVGTGQDAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSVAEAVGSDHRPPRKTSRK 137          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: D8LB11_ECTSI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB11_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 4.080e-42
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRKASRK 76
            VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTS+AEAVGSDHRPPRKASRK
Sbjct:  389 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSVAEAVGSDHRPPRKASRK 464          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: PYRD_RHORT (Dihydroorotate dehydrogenase (quinone) n=2 Tax=Rhodospirillum rubrum TaxID=1085 RepID=PYRD_RHORT)

HSP 1 Score: 104 bits (260), Expect = 4.120e-25
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRKASRK 76
            +PLIGVGG+G G EAY +IRAGASL+Q+YS LVY+GPG V  IK +LA  L+ DGF S+AEAVG+DHR P+ AS K
Sbjct:  285 LPLIGVGGIGDGAEAYARIRAGASLIQIYSALVYEGPGLVGRIKRDLAQRLRADGFASVAEAVGADHRDPKGASGK 360          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A7S3QLY8_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLY8_DUNTE)

HSP 1 Score: 98.6 bits (244), Expect = 1.090e-24
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRK 72
            +PLIG GGV  G++AY KIRAGASLVQ+Y+ L Y GPG VP IKAELA LL+ DGF S+A AVG DH+P ++
Sbjct:   53 IPLIGCGGVSNGEDAYRKIRAGASLVQLYTALAYAGPGVVPTIKAELARLLERDGFESVAAAVGVDHQPGKR 124          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A7S3QLZ6_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLZ6_DUNTE)

HSP 1 Score: 98.6 bits (244), Expect = 4.100e-24
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRK 72
            +PLIG GGV  G++AY KIRAGASLVQ+Y+ L Y GPG VP IKAELA LL+ DGF S+A AVG DH+P ++
Sbjct:  105 IPLIGCGGVSNGEDAYRKIRAGASLVQLYTALAYAGPGVVPTIKAELARLLERDGFESVAAAVGVDHQPGKR 176          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: G1XZR5_9PROT (Dihydroorotate dehydrogenase (quinone) n=7 Tax=Nitrospirillum amazonense TaxID=28077 RepID=G1XZR5_9PROT)

HSP 1 Score: 101 bits (252), Expect = 5.080e-24
Identity = 45/68 (66.18%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHR 68
            +PL+GVGG+G+G +AY KIRAGASLVQ+YS L+Y GPG V  IK +LADLL+ DGFT++A+AVG+DH+
Sbjct:  288 LPLVGVGGIGSGAQAYAKIRAGASLVQIYSALIYHGPGLVAAIKRDLADLLRRDGFTNVAQAVGADHK 355          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A239FKB1_9PROT (Dihydroorotate dehydrogenase (quinone) n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239FKB1_9PROT)

HSP 1 Score: 100 bits (250), Expect = 1.070e-23
Identity = 46/76 (60.53%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPRKASRK 76
            +PL+GVGG+ +G +AY KIRAGASLVQ YS +VY+GPG V  +KAELA LL  DG+ ++AEAVG+DHR PR+ +++
Sbjct:  286 LPLVGVGGIASGADAYAKIRAGASLVQFYSAMVYEGPGLVGRVKAELARLLAADGYLTVAEAVGADHRAPRRTAQE 361          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: H6SJK9_PARPM (Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SJK9_PARPM)

HSP 1 Score: 100 bits (249), Expect = 1.520e-23
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHR 68
            VPLIGVGG+ TG +AY ++RAGASLVQVYS L+Y+GPG V  IK +L D LK DGFTS+AEAVG+DHR
Sbjct:  296 VPLIGVGGITTGADAYARLRAGASLVQVYSALIYEGPGLVRRIKEDLIDCLKKDGFTSVAEAVGADHR 363          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A836CC01_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC01_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.580e-23
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHR 68
            VPLIGVGGVGTGQ+AYDKIRAGASLVQ+YS++VY G G V  +K ELA LL+ +G+ S+AEAVG+ HR
Sbjct:  365 VPLIGVGGVGTGQDAYDKIRAGASLVQIYSMMVYNGAGCVQRVKKELAALLRKNGYASVAEAVGAAHR 432          
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Match: A0A059LQ13_9CHLO (DHO_dh domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LQ13_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 1.670e-23
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSIAEAVGSDHRPPR 71
            +P++GVGGV +G++AY KIRAGASLVQ+Y+  VY GP  VP IK ELA  L+ DGF S+A+AVG+DHR  R
Sbjct:   19 LPIVGVGGVSSGEDAYRKIRAGASLVQLYTAFVYGGPALVPRIKCELAACLERDGFASVAQAVGADHRERR 89          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12811.2128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSP3_9PHAE1.580e-4496.05DHO_dh domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LB11_ECTSI4.080e-4298.68Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
PYRD_RHORT4.120e-2565.79Dihydroorotate dehydrogenase (quinone) n=2 Tax=Rho... [more]
A0A7S3QLY8_DUNTE1.090e-2465.28Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S3QLZ6_DUNTE4.100e-2465.28Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
G1XZR5_9PROT5.080e-2466.18Dihydroorotate dehydrogenase (quinone) n=7 Tax=Nit... [more]
A0A239FKB1_9PROT1.070e-2360.53Dihydroorotate dehydrogenase (quinone) n=2 Tax=Azo... [more]
H6SJK9_PARPM1.520e-2370.59Dihydroorotate dehydrogenase (quinone) n=1 Tax=Par... [more]
A0A836CC01_9STRA1.580e-2370.59Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A059LQ13_9CHLO1.670e-2361.97DHO_dh domain-containing protein n=1 Tax=Helicospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..76
NoneNo IPR availablePANTHERPTHR43517FAMILY NOT NAMEDcoord: 1..67
NoneNo IPR availablePANTHERPTHR43517:SF2DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIALcoord: 1..67
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 1..67
IPR005720Dihydroorotate dehydrogenase domainPFAMPF01180DHO_dhcoord: 1..51
e-value: 4.9E-15
score: 55.5
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..69
e-value: 2.1E-27
score: 97.8
IPR001295Dihydroorotate dehydrogenase, conserved sitePROSITEPS00912DHODEHASE_2coord: 3..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12811contigE-fasciculatus_F_contig12811:3209..3864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12811.2128.1mRNA_E-fasciculatus_F_contig12811.2128.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12811 3209..3864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12811.2128.1 ID=prot_E-fasciculatus_F_contig12811.2128.1|Name=mRNA_E-fasciculatus_F_contig12811.2128.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=77bp
VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADL
LKTDGFTSIAEAVGSDHRPPRKASRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001295Dihydroorotate_DH_CS
IPR013785Aldolase_TIM
IPR005720Dihydroorotate_DH