prot_E-fasciculatus_F_contig1281.2126.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1281.2126.1
Unique Nameprot_E-fasciculatus_F_contig1281.2126.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length142
Homology
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 5.850e-84
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0
Query:    1 MVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            +VVCTLDGPVVTNIRALLTPPPNRELR+KSEYVHHK ISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMK+DLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK
Sbjct:  737 IVVCTLDGPVVTNIRALLTPPPNRELRIKSEYVHHKAISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 878          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.250e-67
Identity = 109/142 (76.76%), Postives = 133/142 (93.66%), Query Frame = 0
Query:    1 MVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            +VVCTLDGPVVT+IRA+LTPPP+RELR+KSEY+HHK I GA+GVKICA GIE+A+AGTPIMV+G DD+E+DIKEEVM+DFT++MK+DL+ +GV+VQASTLGALEALMQFLRKECDPPIPV +V IG ++++DVMRASIM EK
Sbjct:  684 IVVCTLDGPVVTSIRAVLTPPPSRELRIKSEYIHHKEIYGAMGVKICAQGIERAIAGTPIMVIGKDDNEDDIKEEVMKDFTNVMKMDLDTRGVIVQASTLGALEALMQFLRKECDPPIPVSSVNIGPIYRRDVMRASIMLEK 825          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S1D5X2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5X2_CYCTE)

HSP 1 Score: 199 bits (507), Expect = 1.780e-60
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGP+V  IR LLTPPP+RE+RVKS+Y+HHK + GA+GVK+   G+EK +AGTP+MVVGPDD+EEDIK EVM D T L  KL  + KGVMVQASTLGALEAL+QFLR+E  PPIPV A+GIG + K+D+ + SIMNEK
Sbjct:   46 VFCTLDGPIVAEIRGLLTPPPSREMRVKSDYIHHKAVKGALGVKVIGNGLEKVMAGTPVMVVGPDDEEEDIKAEVMSDLTSLQSKLSTDKKGVMVQASTLGALEALLQFLREETQPPIPVSAIGIGTIHKRDITKISIMNEK 187          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: B8BV18_THAPS (Tr-type G domain-containing protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BV18_THAPS)

HSP 1 Score: 193 bits (490), Expect = 5.340e-56
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGP+V  IR LLTPPP+RE+R+KSEY+HHK I GA+GVK+   G+EK +AGT ++VVGPDD+ EDIK EVM D T L  KL  + KGVMVQASTLGALEAL+QFLR+E  PPIPV A+GIG + K+DV + SIMNEK
Sbjct:  257 VFCTLDGPIVAEIRGLLTPPPSREMRIKSEYIHHKEIKGALGVKVIGNGLEKVMAGTSVLVVGPDDEVEDIKAEVMSDLTKLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 398          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S4K8F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8F1_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.790e-56
Identity = 97/142 (68.31%), Postives = 118/142 (83.10%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGPV+T IR LLTPPP+RE+RVK++Y+HHK I GAIGVK+    +EK +AGTP+M+VG DD+EEDIK EVM D + +  KL+++ KGVMVQASTLGALEAL+QFLR+E DPPIPV AVGIG V K+DV + SIMNEK
Sbjct:  603 VFCTLDGPVITEIRGLLTPPPSREMRVKADYIHHKEIKGAIGVKVIGNNLEKVMAGTPVMIVGDDDEEEDIKAEVMSDLSRIQDKLNVDKKGVMVQASTLGALEALLQFLREETDPPIPVSAVGIGTVHKRDVTKISIMNEK 744          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S1FS56_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS56_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.480e-56
Identity = 98/143 (68.53%), Postives = 119/143 (83.22%), Query Frame = 0
Query:    1 MVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            +V+CTL+GPVV+ IR LLTPPP+RELR+KS+Y+HHK I GA+GVK+   G EK +AGTP++VVG +DDEEDIK EVM D T L  KL+ + KGVMVQASTLGALEAL+QFLR+E  PPIPV A+GIG++FKKDV R SIM EK
Sbjct:  663 VVLCTLEGPVVSEIRGLLTPPPSRELRIKSDYIHHKEIKGALGVKLIGNGFEKVMAGTPVLVVGSEDDEEDIKAEVMSDLTRLEEKLNTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGSIFKKDVTRISIMREK 805          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S0CGW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 8.740e-56
Identity = 91/140 (65.00%), Postives = 115/140 (82.14%), Query Frame = 0
Query:    4 CTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            C+LDGPVVT IR LLTPPP+RE+RVKS+Y+HHK + GA+GVKI   G++K +AGTP+M+ G  D+EEDIKEEVM D + L  KL+ + KGVMVQASTLGALEAL+QFLR++  PPIPV A+GIG + K+DV + SIMNE+
Sbjct:   38 CSLDGPVVTEIRGLLTPPPSREMRVKSDYIHHKQVKGALGVKIIGNGLDKVMAGTPMMICGEYDEEEDIKEEVMSDLSKLTNKLNTDSKGVMVQASTLGALEALLQFLREDTKPPIPVSAIGIGTIHKRDVTKISIMNER 177          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S2KAZ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAZ8_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.590e-55
Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGPVVT IR LLTPPP+RE+RVKSEY+HHK I GA+GVK+   G+EK +AGTP+MVVG  D+EEDIKEEVM D + L  KL  + KGVMVQASTLGALEAL+QFLR+E  PPIPV A+GIG + K+DV + SIMNEK
Sbjct:  663 VFCTLDGPVVTEIRGLLTPPPSREMRVKSEYIHHKEIKGALGVKLIGNGLEKVMAGTPVMVVGEYDEEEDIKEEVMSDLSRLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 804          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.130e-55
Identity = 97/142 (68.31%), Postives = 116/142 (81.69%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGPVVT IR LLTPPP+RE+RVK++Y+HHK I GA+GVK+    +EK +AGTP+MVVG  D+EEDIK EVM D T +  KL ++ KGVMVQASTLGALEAL+QFLR+E +PPIPV AVGIG V K+DV + SIMNEK
Sbjct:  447 VFCTLDGPVVTEIRGLLTPPPSREMRVKADYIHHKEIKGALGVKVIGNNLEKVMAGTPVMVVGEHDEEEDIKAEVMSDLTRIQEKLSVDKKGVMVQASTLGALEALLQFLREETEPPIPVSAVGIGTVHKRDVTKISIMNEK 588          
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: B7GD73_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD73_PHATC)

HSP 1 Score: 191 bits (485), Expect = 3.270e-55
Identity = 94/142 (66.20%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    2 VVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 142
            V CTLDGP+VT IR LLTPPP+RE+R+KSEY+HHK + GA+GVK+    +EK +AGTP+MVVGP D+EEDIK EVM D T L  KL  +  GV+VQASTLGALEAL+QFLR+E  PPIPV A+GIG + K+DV + SIMNEK
Sbjct:  265 VFCTLDGPIVTEIRGLLTPPPSREMRIKSEYIHHKEVKGALGVKLIGNNLEKVMAGTPVMVVGPGDEEEDIKAEVMSDLTKLEDKLSTDKVGVLVQASTLGALEALLQFLREETKPPIPVSAIGIGRIHKRDVTKISIMNEK 406          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N8_9PHAE5.850e-8497.18Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CHS5_9STRA4.250e-6776.76Tr-type G domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1D5X2_CYCTE1.780e-6067.61Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8BV18_THAPS5.340e-5666.90Tr-type G domain-containing protein n=2 Tax=Thalas... [more]
A0A7S4K8F1_9STRA6.790e-5668.31Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1FS56_9STRA8.480e-5668.53Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0CGW3_9STRA8.740e-5665.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2KAZ8_9STRA1.590e-5569.72Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7R9WHP7_9STRA3.130e-5568.31Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B7GD73_PHATC3.270e-5566.20Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 1..85
e-value: 1.2E-31
score: 110.8
NoneNo IPR availablePANTHERPTHR43381:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 5Bcoord: 1..142
IPR023115Translation initiation factor IF- 2, domain 3PFAMPF11987IF-2coord: 90..139
e-value: 8.8E-7
score: 29.0
IPR036925Translation initiation factor IF-2, domain 3 superfamilyGENE3D3.40.50.10050coord: 86..142
e-value: 1.8E-15
score: 59.4
IPR036925Translation initiation factor IF-2, domain 3 superfamilySUPERFAMILY52156Initiation factor IF2/eIF5b, domain 3coord: 69..141
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 1..142
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1281contigE-fasciculatus_F_contig1281:17631..18724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1281.2126.1mRNA_E-fasciculatus_F_contig1281.2126.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1281 17624..18724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1281.2126.1 ID=prot_E-fasciculatus_F_contig1281.2126.1|Name=mRNA_E-fasciculatus_F_contig1281.2126.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp
MVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATG
IEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKLDLEPKGVMVQASTL
GALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf
IPR015760TIF_IF2
IPR036925TIF_IF2_dom3_sf
IPR023115TIF_IF2_dom3