mRNA_E-fasciculatus_F_contig1281.2126.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.730e-85 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
DA+VVCTLDGPVVTNIRALLTPPPNRELR+KSEYVHHK ISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMK+DLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK
Sbjct: 735 DAIVVCTLDGPVVTNIRALLTPPPNRELRIKSEYVHHKAISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 878
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA) HSP 1 Score: 231 bits (588), Expect = 6.690e-68 Identity = 110/144 (76.39%), Postives = 134/144 (93.06%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D +VVCTLDGPVVT+IRA+LTPPP+RELR+KSEY+HHK I GA+GVKICA GIE+A+AGTPIMV+G DD+E+DIKEEVM+DFT++MK+DL+ +GV+VQASTLGALEALMQFLRKECDPPIPV +V IG ++++DVMRASIM EK
Sbjct: 682 DRIVVCTLDGPVVTSIRAVLTPPPSRELRIKSEYIHHKEIYGAMGVKICAQGIERAIAGTPIMVIGKDDNEDDIKEEVMKDFTNVMKMDLDTRGVIVQASTLGALEALMQFLRKECDPPIPVSSVNIGPIYRRDVMRASIMLEK 825
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S1D5X2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5X2_CYCTE) HSP 1 Score: 201 bits (512), Expect = 3.430e-61 Identity = 97/145 (66.90%), Postives = 117/145 (80.69%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGP+V IR LLTPPP+RE+RVKS+Y+HHK + GA+GVK+ G+EK +AGTP+MVVGPDD+EEDIK EVM D T L KL + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+D+ + SIMNEK
Sbjct: 43 DRAVFCTLDGPIVAEIRGLLTPPPSREMRVKSDYIHHKAVKGALGVKVIGNGLEKVMAGTPVMVVGPDDEEEDIKAEVMSDLTSLQSKLSTDKKGVMVQASTLGALEALLQFLREETQPPIPVSAIGIGTIHKRDITKISIMNEK 187
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: B8BV18_THAPS (Tr-type G domain-containing protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BV18_THAPS) HSP 1 Score: 195 bits (495), Expect = 1.070e-56 Identity = 96/145 (66.21%), Postives = 115/145 (79.31%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGP+V IR LLTPPP+RE+R+KSEY+HHK I GA+GVK+ G+EK +AGT ++VVGPDD+ EDIK EVM D T L KL + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+DV + SIMNEK
Sbjct: 254 DRAVFCTLDGPIVAEIRGLLTPPPSREMRIKSEYIHHKEIKGALGVKVIGNGLEKVMAGTSVLVVGPDDEVEDIKAEVMSDLTKLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 398
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S0CGW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW3_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.190e-56 Identity = 92/145 (63.45%), Postives = 117/145 (80.69%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D + C+LDGPVVT IR LLTPPP+RE+RVKS+Y+HHK + GA+GVKI G++K +AGTP+M+ G D+EEDIKEEVM D + L KL+ + KGVMVQASTLGALEAL+QFLR++ PPIPV A+GIG + K+DV + SIMNE+
Sbjct: 33 DTAIFCSLDGPVVTEIRGLLTPPPSREMRVKSDYIHHKQVKGALGVKIIGNGLDKVMAGTPMMICGEYDEEEDIKEEVMSDLSKLTNKLNTDSKGVMVQASTLGALEALLQFLREDTKPPIPVSAIGIGTIHKRDVTKISIMNER 177
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S1FS56_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS56_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.380e-56 Identity = 99/145 (68.28%), Postives = 120/145 (82.76%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D +V+CTL+GPVV+ IR LLTPPP+RELR+KS+Y+HHK I GA+GVK+ G EK +AGTP++VVG +DDEEDIK EVM D T L KL+ + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG++FKKDV R SIM EK
Sbjct: 661 DKVVLCTLEGPVVSEIRGLLTPPPSRELRIKSDYIHHKEIKGALGVKLIGNGFEKVMAGTPVLVVGSEDDEEDIKAEVMSDLTRLEEKLNTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGSIFKKDVTRISIMREK 805
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S4K8F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8F1_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.490e-56 Identity = 98/145 (67.59%), Postives = 119/145 (82.07%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGPV+T IR LLTPPP+RE+RVK++Y+HHK I GAIGVK+ +EK +AGTP+M+VG DD+EEDIK EVM D + + KL+++ KGVMVQASTLGALEAL+QFLR+E DPPIPV AVGIG V K+DV + SIMNEK
Sbjct: 600 DRAVFCTLDGPVITEIRGLLTPPPSREMRVKADYIHHKEIKGAIGVKVIGNNLEKVMAGTPVMIVGDDDEEEDIKAEVMSDLSRIQDKLNVDKKGVMVQASTLGALEALLQFLREETDPPIPVSAVGIGTVHKRDVTKISIMNEK 744
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7S2KAZ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAZ8_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.550e-56 Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGPVVT IR LLTPPP+RE+RVKSEY+HHK I GA+GVK+ G+EK +AGTP+MVVG D+EEDIKEEVM D + L KL + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+DV + SIMNEK
Sbjct: 660 DKAVFCTLDGPVVTEIRGLLTPPPSREMRVKSEYIHHKEIKGALGVKLIGNGLEKVMAGTPVMVVGEYDEEEDIKEEVMSDLSRLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 804
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: B7GD73_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD73_PHATC) HSP 1 Score: 193 bits (490), Expect = 6.590e-56 Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGP+VT IR LLTPPP+RE+R+KSEY+HHK + GA+GVK+ +EK +AGTP+MVVGP D+EEDIK EVM D T L KL + GV+VQASTLGALEAL+QFLR+E PPIPV A+GIG + K+DV + SIMNEK
Sbjct: 262 DRAVFCTLDGPIVTEIRGLLTPPPSREMRIKSEYIHHKEVKGALGVKLIGNNLEKVMAGTPVMVVGPGDEEEDIKAEVMSDLTKLEDKLSTDKVGVLVQASTLGALEALLQFLREETKPPIPVSAIGIGRIHKRDVTKISIMNEK 406
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA) HSP 1 Score: 196 bits (497), Expect = 6.620e-56 Identity = 98/145 (67.59%), Postives = 117/145 (80.69%), Query Frame = 2
Query: 2 DAMVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLM-KLDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 433
D V CTLDGPVVT IR LLTPPP+RE+RVK++Y+HHK I GA+GVK+ +EK +AGTP+MVVG D+EEDIK EVM D T + KL ++ KGVMVQASTLGALEAL+QFLR+E +PPIPV AVGIG V K+DV + SIMNEK
Sbjct: 444 DRAVFCTLDGPVVTEIRGLLTPPPSREMRVKADYIHHKEIKGALGVKVIGNNLEKVMAGTPVMVVGEHDEEEDIKAEVMSDLTRIQEKLSVDKKGVMVQASTLGALEALLQFLREETEPPIPVSAVGIGTVHKRDVTKISIMNEK 588 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1281.2126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1281.2126.1 >prot_E-fasciculatus_F_contig1281.2126.1 ID=prot_E-fasciculatus_F_contig1281.2126.1|Name=mRNA_E-fasciculatus_F_contig1281.2126.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp MVVCTLDGPVVTNIRALLTPPPNRELRVKSEYVHHKTISGAIGVKICATGback to top mRNA from alignment at E-fasciculatus_F_contig1281:17624..18724+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1281.2126.1 ID=mRNA_E-fasciculatus_F_contig1281.2126.1|Name=mRNA_E-fasciculatus_F_contig1281.2126.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1101bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1281:17624..18724+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1281:17624..18724+ >mRNA_E-fasciculatus_F_contig1281.2126.1 ID=mRNA_E-fasciculatus_F_contig1281.2126.1|Name=mRNA_E-fasciculatus_F_contig1281.2126.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=852bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1281:17624..18724+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |