mRNA_E-fasciculatus_F_contig12807.2124.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12807.2124.1
Unique NamemRNA_E-fasciculatus_F_contig12807.2124.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A836CD75_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD75_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.880e-60
Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 1 
Query:  193 ARRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQRVWGLTAAITDGVLRNGIVPLL 693
            ARRAAVLVPLCN  GV S+LFTVR++ V THKGQV+FPGGH++ GEG V+AALRET EE+G+ +G + ++G CQT+PA+T T VTPVV +V+RD+     +L L PDEV   FT+ L+ LLDP+ R ++ L  RG +P F A P R+WGLTA ITDGVLRN +VP L
Sbjct:   34 ARRAAVLVPLCNDMGVPSILFTVRTATVPTHKGQVAFPGGHIKAGEGPVDAALRETVEEVGEGIGAVHIVGHCQTVPAVTGTRVTPVVGWVERDVDGCR-RLELCPDEVAHAFTVPLAHLLDPANRGMERLGARGDMPVFMADPHRIWGLTAFITDGVLRNAVVPAL 199
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A482SM29_9ARCH (CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SM29_9ARCH)

HSP 1 Score: 180 bits (456), Expect = 2.080e-53
Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 1 
Query:  196 RRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRG---KLPAFTAGPQ-RVWGLTAAITDGVLRNGIVP 687
            R+AAVL+PLCNR G AS++FTVR+  VSTHKGQVSFPGGH++P E A+EAA+RETREE+GD +G I VLG  QT+PA+T T VTPV+A+V+ D+  L   L  SP EV+ +FT +L+EL +PS RTI +L  +G   K+P +    + R+WGLTA I D +L N ++P
Sbjct:   40 RKAAVLIPLCNRHGQASIMFTVRTQNVSTHKGQVSFPGGHIDPNETAIEAAIRETREELGDGIGIIQVLGVAQTVPAITGTLVTPVLAYVETDVQDLQ-HLTPSPSEVDVIFTRTLAELTNPSYRTIQELERQGVKYKMPVYGGQSEHRIWGLTAMILDPILHNVVMP 206
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A0G4EFA4_VITBC (Nudix hydrolase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFA4_VITBC)

HSP 1 Score: 176 bits (445), Expect = 3.680e-48
Identity = 94/178 (52.81%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:  178 GRSRAARRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGK---LPAFTAGPQRVWGLTAAITDGVLRNGIVPLLQEE 702
            GR+   R+AAVL+PLCNR+GVAS+L T+RS K+S H GQVSFPGGH+E GE  ++AALRET EE+G  +G I ++GTC+ + A+T T V PV+  ++RD+G LL  +  S DEV  VFTLS+ +L DPSL+T++ L   G    +PA+  G  +VWGLTA I +GVLR  +VP+L ++
Sbjct:  293 GRTPPPRQAAVLIPLCNRNGVASVLLTLRSDKIS-HPGQVSFPGGHIERGETPIDAALRETHEELGSRIGDITIIGTCEQVVAVTGTIVHPVIGLLRRDVGELL-WIEKSDDEVADVFTLSIEQLTDPSLQTLEQLPRGGSTYTVPAYLGGVHKVWGLTAFILEGVLRRVVVPVLMQD 468
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A7S3H581_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H581_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.190e-44
Identity = 87/184 (47.28%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:  196 RRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAG----------------PQRVWGLTAAITDGVLRNGIVPLLQE 699
            ++A+V +PLCNR GVAS+LFTVRS  V THKGQVSFPGGH+EPGE  + AA RET EE+G ++G +  +G CQTLPA T TPV PV+ F+++D+G        S  EVE VFT S+ +LLDP+ +  + L    K P  T                   +R+WGLTA I D VL   + P   E
Sbjct:   40 KQASVFIPLCNRHGVASVLFTVRSQHVGTHKGQVSFPGGHLEPGESEIAAAHRETFEELGFTIGNLHTIGNCQTLPAKTLTPVHPVIGFIEQDVGDF-EHFEPSEGEVERVFTRSIEQLLDPAYKRYETLQRDEKSPKVTMPVYGWPDENGDKSSIEYQERIWGLTAMILDSVLAKVVAPTRPE 222
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A7S2RJD6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJD6_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.390e-44
Identity = 92/173 (53.18%), Postives = 111/173 (64.16%), Query Frame = 1 
Query:  187 RAARRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLP-KLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQ--RVWGLTAAITDGVLRNGIVPLLQ 696
            RA RRAAVLVPLC   G   +LFTVRS+ VSTHKGQVSFPGGHM+  E A  AALRE  EE+G SLG +D++  C  +PA+T T VTP++ FV  DIGP    +L L  DEV+  F LS  +L DP+LR        G +P F    +   VWGLTA I DGVLR  + PL +
Sbjct:   83 RADRRAAVLVPLCTSCGEPGVLFTVRSNAVSTHKGQVSFPGGHMDSHESAPVAALREAWEELGTSLGPVDLIARCSPVPAITGTMVTPIIGFVADDIGPTPHNQLQLCRDEVDRAFFLSFDQLHDPNLRLKRHDKKHGDMPVFHGDDEGAEVWGLTAFILDGVLREFLTPLYE 255
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A0G4FNC8_9ALVE (Nudix hydrolase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FNC8_9ALVE)

HSP 1 Score: 160 bits (406), Expect = 2.350e-43
Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 1 
Query:  196 RRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDS-LGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGK----LPAFTAGPQRVWGLTAAITDGVLRNGIVPLLQ 696
            R+AAVLVPLCNR+G AS+LFTVRSSKV THK QVSFPGGH+EPGE   +AALRET EE+G   L  ++++G C  + A+T T V P +  +  D+G L  +L  S DEV+ VFTLSL++L DP   T++ +  RGK    +P + AGP  VWGLTA I  GVLR  I+P L+
Sbjct:   70 RQAAVLVPLCNRNGEASVLFTVRSSKVRTHKRQVSFPGGHLEPGESGKDAALRETGEELGTGFLKGMEIVGRCDEVEAVTGTIVHPYLGVMCEDLGDLR-RLDPSADEVDEVFTLSLTQLTDPRCYTMETVV-RGKAAYRIPCWRAGPAPVWGLTAFILFGVLRRLIIPFLE 239
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A7R9U5Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.210e-39
Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 1 
Query:  196 RRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQRVWGLTAAITDGVLRNGIVPLLQEE 702
            R AAVL+PLC  + + S+LFT R+  VSTHKGQVSFPGGH+E  E     ALRET EE+G S   I  LG C+T+PA+T T VTPV+  ++ D+  +   L LS DEVE+VFTL +  LL  +L  +     RG LP F      VWGLTA I  G + N +   L ++
Sbjct:   54 REAAVLIPLCTNERIPSVLFTKRTDLVSTHKGQVSFPGGHVEADESYERCALRETYEELGISPEHITTLGFCETIPAVTGTMVTPVIGLLKPDLTDV--PLTLSEDEVETVFTLPIRALLSDALLEMRKYENRGTLPVFHGADHEVWGLTAMILHGFVENCLKERLHDD 220
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A7S4A553_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A553_9STRA)

HSP 1 Score: 137 bits (346), Expect = 9.730e-36
Identity = 85/173 (49.13%), Postives = 106/173 (61.27%), Query Frame = 1 
Query:  172 ERGRSRAARRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGAVEAALRETREEIG-DSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQRVWGLTAAITDGVLRNGIVP 687
            ER RS  AR AAVLVP+ + +    ++F+VRS KVSTHK QVSFPGGH+E  E A +AALRE REE G D      V+  C+ + A+T T VTPVVA   R +  L   +V   DEV  VF+L ++ LLDP  R       RG+LP F  GP  +WGLTA + DGVL   + P
Sbjct:  126 ERRRSNGARTAAVLVPIASVNDEPHVVFSVRSDKVSTHKSQVSFPGGHIELNETAEQAALREAREEFGPDFESGFSVVAECREVLAVTGTVVTPVVACRSRPLD-LGRDVVYEEDEVAEVFSLPVAHLLDPVNREERMYENRGRLPVFHGGPAEIWGLTAYVLDGVLEKLVRP 297
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BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A1F9G0N1_9DELT (Nudix hydrolase domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_16_71_12 TaxID=1797848 RepID=A0A1F9G0N1_9DELT)

HSP 1 Score: 134 bits (336), Expect = 2.510e-35
Identity = 82/162 (50.62%), Postives = 101/162 (62.35%), Query Frame = 1 
Query:  202 AAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPG-EGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPL-LPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQRVWGLTAAITDGVLRNGI 681
            AAVLVPL +RDG  ++LFT R+  V THKGQVSFPGG MEP  E  V  ALRE  EEIG + G ++VLG    + ++T   VTPV+ +    IG L   +L L PDEV+  F L+L EL+DP  R    L G  + P F AGP  +WGLTA I D VLR  +
Sbjct:   40 AAVLVPLGHRDGAPAILFTKRTDTVGTHKGQVSFPGGRMEPSDEDEVACALRELHEEIGLAPGDVEVLGPFHDMMSITGLRVTPVLGW----IGALDEARLSLRPDEVQQAFALTLDELVDPDKRATQML-GELRAPYFAAGPHPIWGLTALILDEVLREAL 196
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Match: A0A7Y5LQX5_9DELT (CoA pyrophosphatase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y5LQX5_9DELT)

HSP 1 Score: 132 bits (331), Expect = 1.010e-34
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 1 
Query:  196 RRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVSFPGGHMEPGEGA-VEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTPVVAFVQRDIGPL--LPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGKLPAFTAGPQRVWGLTAAITDGVLR 672
            +RAAVL+PLC      S+LFT RS  VSTHKGQVSFPGG ++  + + V  ALRE  EE+G S   ++VLG    + ++T   VTP+V +    +G L  LP    +  E++SVFTL+L+EL DP+LR+  +L  RG++P F+ GP  VWGLTA I D  LR
Sbjct:   36 KRAAVLIPLCCVQSQPSILFTRRSDHVSTHKGQVSFPGGMVDDDDSSPVTTALREWEEELGVSADFVEVLGMFHDVLSITGVAVTPIVGY----LGDLEQLPPWAPNAHEIDSVFTLTLNELSDPALRSTQNLPHRGQIPVFSGGPAPVWGLTAYILDEFLR 193
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12807.2124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD75_9STRA2.880e-6059.88NUDIX hydrolase domain-like protein n=1 Tax=Tribon... [more]
A0A482SM29_9ARCH2.080e-5355.95CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665... [more]
A0A0G4EFA4_VITBC3.680e-4852.81Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A7S3H581_9STRA1.190e-4447.28Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2RJD6_9STRA2.390e-4453.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4FNC8_9ALVE2.350e-4354.65Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7R9U5Y6_9STRA1.210e-3947.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4A553_9STRA9.730e-3649.13Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A1F9G0N1_9DELT2.510e-3550.62Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7Y5LQX5_9DELT1.010e-3448.15CoA pyrophosphatase n=1 Tax=Myxococcales bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12807contigE-fasciculatus_F_contig12807:4..3667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score118.6
Seed ortholog evalue3.8e-24
Seed eggNOG ortholog192875.XP_004343618.1
Preferred nameNUDT8
KEGG koko:K18665
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0008150,GO:0008152,GO:0008413,GO:0009636,GO:0009987,GO:0015036,GO:0016462,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016787,GO:0016817,GO:0016818,GO:0042221,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0047429,GO:0050451,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:1990748
EggNOG free text desc.metal ion binding
EggNOG OGs3A4Q8@33154,COG0494@1,KOG3069@2759
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-28_000710.1
COG Functional cat.L
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size702
Cds size702
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12807.2124.1prot_E-fasciculatus_F_contig12807.2124.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12807 4..3667 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927786.200813-CDS-E-fasciculatus_F_contig12807:3..1891622927786.200813-CDS-E-fasciculatus_F_contig12807:3..189Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 4..189 -
1695995693.4806545-CDS-E-fasciculatus_F_contig12807:3..1891695995693.4806545-CDS-E-fasciculatus_F_contig12807:3..189Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 4..189 -
1622927786.2129486-CDS-E-fasciculatus_F_contig12807:730..8191622927786.2129486-CDS-E-fasciculatus_F_contig12807:730..819Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 731..819 -
1695995693.494921-CDS-E-fasciculatus_F_contig12807:730..8191695995693.494921-CDS-E-fasciculatus_F_contig12807:730..819Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 731..819 -
1622927786.22315-CDS-E-fasciculatus_F_contig12807:1447..15801622927786.22315-CDS-E-fasciculatus_F_contig12807:1447..1580Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 1448..1580 -
1695995693.506657-CDS-E-fasciculatus_F_contig12807:1447..15801695995693.506657-CDS-E-fasciculatus_F_contig12807:1447..1580Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 1448..1580 -
1622927786.2321713-CDS-E-fasciculatus_F_contig12807:1975..20481622927786.2321713-CDS-E-fasciculatus_F_contig12807:1975..2048Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 1976..2048 -
1695995693.5210133-CDS-E-fasciculatus_F_contig12807:1975..20481695995693.5210133-CDS-E-fasciculatus_F_contig12807:1975..2048Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 1976..2048 -
1622927786.2432456-CDS-E-fasciculatus_F_contig12807:3446..36671622927786.2432456-CDS-E-fasciculatus_F_contig12807:3446..3667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 3447..3667 -
1695995693.5299692-CDS-E-fasciculatus_F_contig12807:3446..36671695995693.5299692-CDS-E-fasciculatus_F_contig12807:3446..3667Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12807 3447..3667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12807.2124.1

>prot_E-fasciculatus_F_contig12807.2124.1 ID=prot_E-fasciculatus_F_contig12807.2124.1|Name=mRNA_E-fasciculatus_F_contig12807.2124.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp
MHLHGRAPFTFNEQNLAAIRKVFTLGPLPLLAGYEQYELEASTSAAAVPR
ASLTSRSERGRSRAARRAAVLVPLCNRDGVASLLFTVRSSKVSTHKGQVS
FPGGHMEPGEGAVEAALRETREEIGDSLGRIDVLGTCQTLPALTDTPVTP
VVAFVQRDIGPLLPKLVLSPDEVESVFTLSLSELLDPSLRTIDDLWGRGK
LPAFTAGPQRVWGLTAAITDGVLRNGIVPLLQEE
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mRNA from alignment at E-fasciculatus_F_contig12807:4..3667-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12807.2124.1 ID=mRNA_E-fasciculatus_F_contig12807.2124.1|Name=mRNA_E-fasciculatus_F_contig12807.2124.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3664bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12807:4..3667- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCATCTGCATGGACGAGCGCCTTTCACCTTCAACGAACAGAACCTCGC
GGCCATACGGAAGGTCTTCACGCTCGGGCCGTTGCCGCTGTTGGCTGGAT
ATGAACAATATGAACTGGAAGCGTCCACCTCTGCTGCTGCCGTACCTCGC
GCATCATTGACCTCGCGGAGTGAACGAGGGAGATCAAGGGCGGCAAGAAG
AGCGGCTGTTCTCGTCCCTCTGTGAGCGTGTACTGCTGTGGTGCAATCCT
CCACTACAGCAGGGTCGAAATGCATTTGAGTGCGGCGTAACCTACGCGTT
TGAATTTTTTGAGCCGTCAGCCGTGCTGGTCAGTTTGAACCTCGCATTCC
TGCCACTAGCGCCCGCTGAGCCGACATAACGCCTAACACGTACGTGAAAC
AGTCGGAAAGAGGGTTCAGGTGTTCAGCTGAGAGTGTCTCGAGCACTACA
GTACAATACAGCAGTCACCGAGGAGAACGACGAAGTGCTGCTACTCTACT
TCATCATTTTGTACAAGCGTGATGCGGCGAAATGGAAGACAATATGGTGG
CAAGATGAATTAATTCGCGGGCCGTCAACCTTCTAGTCGAACTTTTTCGG
CCATGCAAAAATCGCCAGAGTGGCGAGAATCGAACCCAAGACGGGTCGGC
TCACGAGCAGGAGCTTGTCTCCTAGACCAGCCGTCTCTTCGTTGTACATT
GTGGTGAAAAACTCCTTTCTCAACAGCAAAAAACAACAAAAATAGATGGC
CCTGGTGCCGTTGTCGTGTACAGTCAGCAGTGCAATTTCGTGTACGGAGG
AACAGTTTTTCTACGAATCCTCTCACACTTGCCACACTGCTCTGAAATTG
TGAAGGGATGGTTCAGCCGTTGACGTCATGCAGGGAAGCTGGCTCCAATT
TACTTAATCCATACAAACTCAAGTGATTTAGCAATTTCCGACTTTTGGGA
CTTTTGGGACACGATATTCAGGATGCGAAAAACGCGGCCGAGCGCGCTTC
ATGTATGTATGTGCGTACGACATCGTCACGCCCTCATGTACAGCAGGTTA
GAGAGTACGCGTAGCGAGAGGATCAGGCGGGCCTGTCACATTTTCGGGTC
GACCGTGCCCCCCCCCCCGGCGCAGATCCCCGGAAGACGGCGCGAGGGCG
GAGGAGATACGCAGCGGGCGCAGTAGCGCTGGTTGAATAATGCAATGCTG
CCGTGTTTTCGCCGGGAACAGACCGTATGACATGTCATTCTGTACTCTGT
ACTCTGAGTAGTGCCGTGCTCTGATTAGTGAGTGCCGGTATGCTAGTCTG
GTCCATACCGGTACTGCCGAGGGTCCCCCACGGACATTGTCGTTGATCGC
TTCACGTATGTAGAGTTTGTAGGACGGCGTGCTCTCTTTTCCCGCACGCT
TCGACGCTGCCGTGGTTGTATGCTGCTCAGAAACGCTCCATGGTTCAAGC
CCGGCCTTACGATGCATGGGTATCTCGAGAGACGCTAGTTTTATCGCCCC
CCCCCCNNNNNNNNNNCCCACCCCCACCCCCACCCCCCTGCTCTCTCGCC
ACCCTCTCCGGTGCACCTGCGATAACCTGTGCAATCTCCGCCTTGCATAC
GTGCTCTTGTTCACCACAGGTGCAATCGCGATGGGGTAGCGAGCCTTCTT
TTCACCGTTCGATCCAGCAAAGTCTCAACCCACAAGGGGCAGGTATGTAT
GACGAACCGACTACCAAGAGATGGACATATATAGAATGCCACATAGACTA
TGCATACAGGACACCGGCTCAAAGCATCGCCCATTCTTGGCTCCCAGTAG
CAGGGTGTGTCTGCATGCCCAAACTCGAGCCTTCCCAGCACAACTCTTTC
AGCCCTTTCGCGATAGAATATGGCGCATTTTTGTTCTGGCAGGGGTGCGT
AGAGTAGTCGAATATGCGACGTGCTGTTGCACCCTACCATTAACACCAAA
ACATGGGAGAGTAGCAATTTGCTGCCCCCCCGGGGGGGCACCTAAGCGTT
GGTTCGTAGTGATGGGGTGACCAAGCGGGTGACCAGGTGGCAACGACCGA
TTGATTTGCTAGACGCACACACGGGAATGGATCCCAGGTTTCCTTTCCGG
GAGGGCACATGGAGCCCGGTGAAGGTGCAGTCGAGGCAGCGCTCAGGGAG
ACGCGAGAAGAGATTGGGGACAGCCTAGGAAGGATCGACGTTCTGGGCAC
TTGCCAGACGCTACCAGCACGTAAGTGCGTGTCAGGACTCTTCCATCATT
CCCCCGCTACCCTTTCGCCTCCCTCTCTCGGGTTTCCCAAGCTCTCCGTC
TCTCTGAATGTCCCCTGCGGTGCATTCATGTAGCTTTTTTTGTTGTTCAA
GAGAGATTGCTTTCCGTTGAACGAAATGGTTGCGACATACGGTAGACGCT
GGTGCGAGGACTACCGGCGTAGGCATGGCGCTATGGTGGTATGACGCGTC
TAGACGAGCGCACAACTCGTGCGCTGTGCCGACGGATGGAGCGCCACGGC
GACGTGCAGCAGCCGATGTGTACCTACACTGCTGCTGTGGCCGAGAGCTT
GGTTTGCGTTGCCGACACGGCATCGCCCGTCTTCTCGAGTTGTCGTACCT
CTTCCACCCCCGCCCCCCTTGCGGTGCATCTTATTGTCACGCGCCGTGGT
TGGCGACTCCTTTTACCGTCTGACGACTAAATGCCTCGTCCGGACCACCA
CCCAGCCCCTGTCTGACGCAACGGTCGAATCGGCCAATCAGCTTGTTACA
CGAAGGATTCGCGAGTTGCGTCTCCTCGAGGAGAAACGTACTGATGTTGT
TCTCCGGCCCCTTGGATGTTTATCGCCTCTTGCTCATCCCTCCGCCAGTA
ACGGATACGCCGGTGACCCCCGTGGTAGCGTTCGTCCAACGAGACATCGG
CCCCCTTCTGCCGAAGCTGGTGCTGAGTCCGGACGAGGTATGTACATGTG
CACGCGAAAGAGACTTTTTGAGGATGGGATAGAGAAAAAGGGATCGCGGG
TAGTGCTGTCGTGAGTAAATGTGCGACAACCGGTCCCGCCGATTGGAGAA
GCCACGCTTCTTAGGGGCTCGGTGACCATGGACGCTACGTACTTGGTATC
TATCATCATACGTTTTTTTGTGTTGTGCAGCAGCAGTCGACTGGTTTCGC
ATCTATCCCTCAACCCCACCAAGAAAAATCGCAAATGCCCCGAATCGTGT
CCAGTGGACCGAGGTTCCAGTATCCTTTGCTAATACCTCCTACAGCCCTC
ATGGATGCTCCATAGCCTTGCCCAAACCGTACGCTTTCGAAATGTTGCTA
TTATAGCACAGCAGCGGTGTAAACGGGAACCTATTACCAATTCTCTTGGA
CGGACTCTCGAAAACAATTTCACCGCCCCAGCATTGTCTTCCGTGTGCAC
ACACTCAACAACTTTCACGTGCCGACAGCAACAAACGCCACCTTACGACT
CTGGGTGGTGGTTGAAATTTGTTCACAGGTCGAGAGCGTGTTTACCCTGT
CCCTGAGCGAGCTCTTGGACCCGTCGTTACGCACGATTGATGACCTGTGG
GGGCGAGGGAAGCTACCGGCTTTCACCGCGGGGCCTCAACGCGTGTGGGG
ACTGACCGCGGCCATCACCGACGGGGTCCTTCGAAACGGGATCGTCCCAC
TGCTGCAGGAGGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12807:4..3667-

>mRNA_E-fasciculatus_F_contig12807.2124.1 ID=mRNA_E-fasciculatus_F_contig12807.2124.1|Name=mRNA_E-fasciculatus_F_contig12807.2124.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12807:4..3667- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCATCTGCATGGACGAGCGCCTTTCACCTTCAACGAACAGAACCTCGC
GGCCATACGGAAGGTCTTCACGCTCGGGCCGTTGCCGCTGTTGGCTGGAT
ATGAACAATATGAACTGGAAGCGTCCACCTCTGCTGCTGCCGTACCTCGC
GCATCATTGACCTCGCGGAGTGAACGAGGGAGATCAAGGGCGGCAAGAAG
AGCGGCTGTTCTCGTCCCTCTATGCATCTGCATGGACGAGCGCCTTTCAC
CTTCAACGAACAGAACCTCGCGGCCATACGGAAGGTCTTCACGCTCGGGC
CGTTGCCGCTGTTGGCTGGATATGAACAATATGAACTGGAAGCGTCCACC
TCTGCTGCTGCCGTACCTCGCGCATCATTGACCTCGCGGAGTGAACGAGG
GAGATCAAGGGCGGCAAGAAGAGCGGCTGTTCTCGTCCCTCTGTGCAATC
GCGATGGGGTAGCGAGCCTTCTTTTCACCGTTCGATCCAGCAAAGTCTCA
ACCCACAAGGGGCAGGTGCAATCGCGATGGGGTAGCGAGCCTTCTTTTCA
CCGTTCGATCCAGCAAAGTCTCAACCCACAAGGGGCAGGTTTCCTTTCCG
GGAGGGCACATGGAGCCCGGTGAAGGTGCAGTCGAGGCAGCGCTCAGGGA
GACGCGAGAAGAGATTGGGGACAGCCTAGGAAGGATCGACGTTCTGGGCA
CTTGCCAGACGCTACCAGCACGTTTCCTTTCCGGGAGGGCACATGGAGCC
CGGTGAAGGTGCAGTCGAGGCAGCGCTCAGGGAGACGCGAGAAGAGATTG
GGGACAGCCTAGGAAGGATCGACGTTCTGGGCACTTGCCAGACGCTACCA
GCACTAACGGATACGCCGGTGACCCCCGTGGTAGCGTTCGTCCAACGAGA
CATCGGCCCCCTTCTGCCGAAGCTGGTGCTGAGTCCGGACGAGTAACGGA
TACGCCGGTGACCCCCGTGGTAGCGTTCGTCCAACGAGACATCGGCCCCC
TTCTGCCGAAGCTGGTGCTGAGTCCGGACGAGGTCGAGAGCGTGTTTACC
CTGTCCCTGAGCGAGCTCTTGGACCCGTCGTTACGCACGATTGATGACCT
GTGGGGGCGAGGGAAGCTACCGGCTTTCACCGCGGGGCCTCAACGCGTGT
GGGGACTGACCGCGGCCATCACCGACGGGGTCCTTCGAAACGGGATCGTC
CCACTGCTGCAGGAGGAGGTCGAGAGCGTGTTTACCCTGTCCCTGAGCGA
GCTCTTGGACCCGTCGTTACGCACGATTGATGACCTGTGGGGGCGAGGGA
AGCTACCGGCTTTCACCGCGGGGCCTCAACGCGTGTGGGGACTGACCGCG
GCCATCACCGACGGGGTCCTTCGAAACGGGATCGTCCCACTGCTGCAGGA
GGAG
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