mRNA_E-fasciculatus_F_contig128.2119.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig128.2119.1
Unique NamemRNA_E-fasciculatus_F_contig128.2119.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.260e-128
Identity = 191/292 (65.41%), Postives = 236/292 (80.82%), Query Frame = 1
Query:    1 QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRID 876
            QL PVV NG EA+T AASVLSS+YYR  V++F L+KTMRN++DP +SKMVDDIGDGVS +DE G  TI+GV+TE+ L+ +IDFVFP +VL++P ACAKR +IS H D+V  +N  VL R+    +TL+GRT+LDH+HL+ D DD F MS +L+ ++  G+P+H I L  GVVVMLCRNLSIDD LTNG+KV+V+ I  +TL+++TLD G + WLPRI F FVT QGVAVKRVQFPVRLCF +TVHRAQGQTLD+ C DL+RHPFAHGH+YVGLSRVRKS D+II TT DRID
Sbjct:  341 QLPPVVPNGGEAETTAASVLSSAYYRDNVEIFHLSKTMRNKDDPRYSKMVDDIGDGVSDIDEAGLITITGVRTEEALDVAIDFVFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARVNGETYTLQGRTMLDHKHLDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQTLDHGKMFWLPRIAFNFVTDQGVAVKRVQFPVRLCFCLTVHRAQGQTLDKTCIDLTRHPFAHGHLYVGLSRVRKSDDIIILTTSDRID 632          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 1.190e-102
Identity = 167/293 (57.00%), Postives = 207/293 (70.65%), Query Frame = 1
Query:    1 QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDD 879
            QL PVV NG E++T AASVLSS++YR  V VF L  TMRN++DP FSKMVD IGDG +PVD +G  T++GV T   LE +IDFVFP  VL++P ACAKR +IS H D+V  +N  VL+R+     TL GRT+LDHE ++ D+                GIP+H I+LK GVVV LCRN+SID +LTNG+KV+V +I +YTL+VK L DG                 VAVKR+ FPVRL F +TVHRAQGQTLD+ CFDL+RHPFAHGH+YVGLSRVRK+ D+II TTPDR++D
Sbjct:  296 QLPPVVANGGESETTAASVLSSAFYRDNVDVFHLNTTMRNKDDPDFSKMVDAIGDGEAPVDADGLVTMTGVDTALSLESAIDFVFPYYVLQNPTACAKRGIISTHNDSVARVNAAVLSRVQGDMFTLRGRTMLDHEQMDPDS----------------GIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVKNLKDG-----------------VAVKRIHFPVRLWFCLTVHRAQGQTLDKTCFDLTRHPFAHGHLYVGLSRVRKADDVIILTTPDRVND 555          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: D7FRZ0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.690e-57
Identity = 95/160 (59.38%), Postives = 122/160 (76.25%), Query Frame = 1
Query:  112 MRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDIN 591
            MRN++DP FSKMVDDIG+GVS +DE G TTI+GV+TEQ L+  IDF FP +VL++P ACAKR +IS H D+V  +N  VL R+     TL+GRT+LDHEHL+ D DD F MS +L+ ++P  +P+H I LK GVVV+LCRNLSIDD LTNG+KV++   N
Sbjct:    1 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFN 160          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: A0A6J1TK21_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TK21_FRAOC)

HSP 1 Score: 167 bits (423), Expect = 8.110e-46
Identity = 113/305 (37.05%), Postives = 154/305 (50.49%), Query Frame = 1
Query:    1 QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPV-----DEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLL----DHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKF--VTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDN 882
            QLAPVV +       AA+ L SS     ++   LT   R      +   +  +G+G         D  G   +  V +  D    I+FVFP ++L DP  CAKRAV+  H   VDD N ++L  +       EG  ++    D  H E      F   + L      G+P H +R+KKG V M+ RNL+ DD L NGSKV+V+D+    + V+         +PRITFKF  V    + V R QFP+RL +A TVH++QG TLD+V  DL   PFAHG +Y  LSRVR   D+++     RI DN
Sbjct:   51 QLAPVVPDAKTLAEIAAASLRSSPIFPGLRRMHLTVAHRQAGSDDYVAFLMQVGNGTIAQHTLADDSVGVVGLPLVSSVPDRSNLINFVFPRDLLSDPDECAKRAVLCTHNVDVDDTNHQLLQDV-------EGDEIVCASADFVHAEDLAPGEFIDDELLHQATGKGVPPHMLRIKKGAVCMITRNLNSDDGLVNGSKVIVVDVTPRLVIVRLPGSQERMGIPRITFKFPIVRDSPLVVTRRQFPLRLAYACTVHKSQGLTLDKVAVDLRTDPFAHGLLYTALSRVRSPNDIVVLVQEARIFDN 348          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51)

HSP 1 Score: 171 bits (434), Expect = 1.770e-44
Identity = 108/306 (35.29%), Postives = 167/306 (54.58%), Query Frame = 1
Query:    1 QLAPVVVNG-AEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTT--------ISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFK--FVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDN 882
            Q+ PVVV   + +D    SV SS  +  ++K+F L+ + RNR+DP +S  +  +G    PV                S +    DL   IDFVF   V+ +P  CA RA+++ H   V +IN  VL R+  ++ H      ++        TD++F  +D L+ LQP G+P H ++LK G V M+ RNLS  D+L NG+KV+V+      + V+   +     +PRI FK        + + R QFP+ LC+A+TVH++QGQT++RV  DL    F+HG +YV L RV++ +D+ I  + D++ DN
Sbjct:  768 QIPPVVVRAKSNSDIINCSVKSSPIWE-QIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSHLSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSEN-----TDEIFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRKPGETNEFLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKLIDN 1067          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0)

HSP 1 Score: 159 bits (401), Expect = 2.480e-42
Identity = 104/302 (34.44%), Postives = 168/302 (55.63%), Query Frame = 1
Query:    1 QLAPVVVNGAE-ADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVK--RVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRI 873
            Q+ PVVV+    +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +     L+  IDFV+P  +L +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ +QP GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK     G  ++  R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSR +   ++ I  + +R+
Sbjct:   76 QIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILISEERV 371          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA)

HSP 1 Score: 162 bits (409), Expect = 4.640e-42
Identity = 99/295 (33.56%), Postives = 163/295 (55.25%), Query Frame = 1
Query:    1 QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEG-FTTI--SGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKF-VTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRI 873
            Q+ P++ +G++AD   AS+ SS  +   +K  +L   +R+R+D  +S+ V  +G+   P    G + TI    +     L++ IDFV+P +VL +P  C  RA++S     + +IN  VL  IP     L            G  D+    SD L+ +   G+P H + LK G V +L RN+S +D+L NG+KV+V  I+   ++ +  +      +PRI FKF V+  G+ + R QFP+++ + VT++++QGQTL++V  DL    F+HG +YV L RVR   D+ +  T +R+
Sbjct:  273 QIPPIIPDGSKADIIGASLKSSELWPIIIKK-KLRSILRSRDDRAYSEFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLSNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSADST--PPCAGAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIVEKISRRFIEARIPNATDTVMIPRIPFKFAVSNSGIEMIRKQFPLKVAYGVTINKSQGQTLEKVGVDLRSDVFSHGQLYVALGRVRSVNDVKVLVTENRV 564          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: UPI001568188F (uncharacterized protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F)

HSP 1 Score: 159 bits (402), Expect = 3.620e-40
Identity = 105/302 (34.77%), Postives = 169/302 (55.96%), Query Frame = 1
Query:    1 QLAPVVVNG-AEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFK--FVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRI 873
            Q+ PVVV+  + +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +    +L+  IDFV+P  VL +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ + P GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK    T   + + R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSRV+   ++ I    +R+
Sbjct: 1491 QIPPVVVHARSNSDVFNASVKSSPIWQ-KLKTFSLITSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLINLSIISFVLELDDLIDFVYPNVVLNEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRVQHRQNIKILVNKERV 1786          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66)

HSP 1 Score: 158 bits (400), Expect = 6.270e-40
Identity = 104/302 (34.44%), Postives = 167/302 (55.30%), Query Frame = 1
Query:    1 QLAPVVVNGAE-ADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVK--RVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRI 873
            Q+ PVVV+    +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +     L+  IDFV+P  +L +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ +QP GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK     G  ++  R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSR +   ++ I    +R+
Sbjct:  932 QIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILVNEERV 1227          
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Match: A0A6P8ZK23_THRPL (ATP-dependent DNA helicase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZK23_THRPL)

HSP 1 Score: 157 bits (398), Expect = 1.060e-39
Identity = 100/305 (32.79%), Postives = 164/305 (53.77%), Query Frame = 1
Query:    1 QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPV-------DEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEG--RTLLDHEHLEGDTDDVFCMSDY-LSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQG--VAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDD 879
            Q+APVV          A  L SS+     KVF+LT   R R    +S+ +  +G+G  P        ++E    +  ++    L + ID ++P  +L +P A A+RA+++     +  IND +L       H+L G    LL ++ ++ + DD F + +  L   +  G+P H ++LK G V  + RNL+I++ L NG+KV+V  ++   ++V+         +PRITFKF    G  + + R QFP++L +A++ H++QGQT+++V  DL    F HG +YVGLSRVR   D+++    DRI D
Sbjct:  642 QIAPVVPRARCPSDVVAVSLRSSHLWEFFKVFKLTVPQRTRGSDDYSQYLLHVGNGTLPETTFGEGREQEKLVPLRSLRHMTTLHQLIDEIYPGHILSNPDAAAQRAILATLNTNIRAINDVIL-------HSLHGTLHELLSYDEVDKEADDGFDVDEETLHQTRAKGVPDHILKLKIGAVCFITRNLNIEEGLVNGTKVVVEAVSPRIVRVRKAGGNETFAIPRITFKFPIVDGAPLMINRRQFPLQLAYAMSFHKSQGQTINKVGVDLRTDCFTHGQLYVGLSRVRSPDDIVVLVPHDRIHD 939          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig128.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH9_ECTSI1.260e-12865.41ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KSD8_9PHAE1.190e-10257.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7FRZ0_ECTSI1.690e-5759.38ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6J1TK21_FRAOC8.110e-4637.05ATP-dependent DNA helicase n=1 Tax=Frankliniella o... [more]
UPI00103A3A511.770e-4435.29uncharacterized protein LOC114364057 n=1 Tax=Ostri... [more]
UPI001E68D7A02.480e-4234.44ATP-dependent DNA helicase PIF1-like n=1 Tax=Manio... [more]
UPI001ED89BAA4.640e-4233.56ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischn... [more]
UPI001568188F3.620e-4034.77uncharacterized protein LOC117996074 n=2 Tax=Aphan... [more]
UPI001E688A666.270e-4034.44uncharacterized protein LOC123868181 n=2 Tax=Manio... [more]
A0A6P8ZK23_THRPL1.060e-3932.79ATP-dependent DNA helicase n=1 Tax=Thrips palmi Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig128contigE-fasciculatus_F_contig128:33129..34010 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score393.3
Seed ortholog evalue1e-106
Seed eggNOG ortholog2880.D7FZH9
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size882
Cds size882
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927785.6889944-CDS-E-fasciculatus_F_contig128:33128..340101622927785.6889944-CDS-E-fasciculatus_F_contig128:33128..34010Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig128 33129..34010 +
1695995693.2065296-CDS-E-fasciculatus_F_contig128:33128..340101695995693.2065296-CDS-E-fasciculatus_F_contig128:33128..34010Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig128 33129..34010 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig128.2119.1prot_E-fasciculatus_F_contig128.2119.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig128 33129..34010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig128.2119.1

>prot_E-fasciculatus_F_contig128.2119.1 ID=prot_E-fasciculatus_F_contig128.2119.1|Name=mRNA_E-fasciculatus_F_contig128.2119.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=294bp
QLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMV
DDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRA
VISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSD
YLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYT
LQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVRLCFAVTVHRAQGQ
TLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDN
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mRNA from alignment at E-fasciculatus_F_contig128:33129..34010+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig128.2119.1 ID=mRNA_E-fasciculatus_F_contig128.2119.1|Name=mRNA_E-fasciculatus_F_contig128.2119.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=882bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:33129..34010+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTGGCTCCCGTCGTTGTCAATGGCGCAGAAGCCGATACGTGCGCGGC ATCCGTCCTCTCCAGTTCTTACTATCGTGCCAGGGTGAAGGTGTTCCGCC TCACGAAAACAATGCGTAATCGCGAGGACCCCCCATTTTCAAAAATGGTC GATGACATCGGCGATGGCGTTTCTCCGGTCGACGAGGAAGGGTTCACAAC GATTTCTGGTGTACAAACAGAACAGGATCTCGAAAAGTCCATTGATTTTG TATTTCCACTCGAAGTTCTCAAAGATCCCATCGCTTGTGCCAAGCGCGCC GTCATTTCCTTGCACAAAGACACCGTTGACGACATCAACGACAGAGTTTT GACTCGGATTCCCGACGTTTGTCACACGTTGGAAGGGCGAACTTTGCTGG ATCATGAGCATCTAGAGGGTGATACGGATGACGTCTTTTGCATGTCTGAT TACTTGAGTTTGTTGCAACCGCCCGGTATCCCGGCACATACCATTCGCCT AAAAAAGGGTGTGGTCGTTATGTTATGCCGGAACCTTTCCATCGATGATA AATTAACGAACGGGTCTAAGGTCCTTGTTATGGATATCAACGCGTACACG CTGCAAGTGAAAACGCTCGATGATGGTACCATACATTGGCTCCCGCGCAT TACGTTTAAGTTCGTAACCTGGCAGGGCGTAGCTGTTAAAAGGGTTCAGT TCCCTGTGCGTCTGTGTTTTGCTGTCACGGTGCACAGAGCACAAGGCCAG ACCTTAGATCGTGTATGTTTCGATTTGAGTCGCCACCCATTTGCGCATGG GCACGTATATGTAGGGTTGTCCCGAGTCCGTAAGTCTGCTGACATGATCA TTTTTACGACGCCTGATCGCATAGATGATAAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig128:33129..34010+

>mRNA_E-fasciculatus_F_contig128.2119.1 ID=mRNA_E-fasciculatus_F_contig128.2119.1|Name=mRNA_E-fasciculatus_F_contig128.2119.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1764bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:33129..34010+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTGGCTCCCGTCGTTGTCAATGGCGCAGAAGCCGATACGTGCGCGGC
ATCCGTCCTCTCCAGTTCTTACTATCGTGCCAGGGTGAAGGTGTTCCGCC
TCACGAAAACAATGCGTAATCGCGAGGACCCCCCATTTTCAAAAATGGTC
GATGACATCGGCGATGGCGTTTCTCCGGTCGACGAGGAAGGGTTCACAAC
GATTTCTGGTGTACAAACAGAACAGGATCTCGAAAAGTCCATTGATTTTG
TATTTCCACTCGAAGTTCTCAAAGATCCCATCGCTTGTGCCAAGCGCGCC
GTCATTTCCTTGCACAAAGACACCGTTGACGACATCAACGACAGAGTTTT
GACTCGGATTCCCGACGTTTGTCACACGTTGGAAGGGCGAACTTTGCTGG
ATCATGAGCATCTAGAGGGTGATACGGATGACGTCTTTTGCATGTCTGAT
TACTTGAGTTTGTTGCAACCGCCCGGTATCCCGGCACATACCATTCGCCT
AAAAAAGGGTGTGGTCGTTATGTTATGCCGGAACCTTTCCATCGATGATA
AATTAACGAACGGGTCTAAGGTCCTTGTTATGGATATCAACGCGTACACG
CTGCAAGTGAAAACGCTCGATGATGGTACCATACATTGGCTCCCGCGCAT
TACGTTTAAGTTCGTAACCTGGCAGGGCGTAGCTGTTAAAAGGGTTCAGT
TCCCTGTGCGTCTGTGTTTTGCTGTCACGGTGCACAGAGCACAAGGCCAG
ACCTTAGATCGTGTATGTTTCGATTTGAGTCGCCACCCATTTGCGCATGG
GCACGTATATGTAGGGTTGTCCCGAGTCCGTAAGTCTGCTGACATGATCA
TTTTTACGACGCCTGATCGCATAGATGATAACCAGCTGGCTCCCGTCGTT
GTCAATGGCGCAGAAGCCGATACGTGCGCGGCATCCGTCCTCTCCAGTTC
TTACTATCGTGCCAGGGTGAAGGTGTTCCGCCTCACGAAAACAATGCGTA
ATCGCGAGGACCCCCCATTTTCAAAAATGGTCGATGACATCGGCGATGGC
GTTTCTCCGGTCGACGAGGAAGGGTTCACAACGATTTCTGGTGTACAAAC
AGAACAGGATCTCGAAAAGTCCATTGATTTTGTATTTCCACTCGAAGTTC
TCAAAGATCCCATCGCTTGTGCCAAGCGCGCCGTCATTTCCTTGCACAAA
GACACCGTTGACGACATCAACGACAGAGTTTTGACTCGGATTCCCGACGT
TTGTCACACGTTGGAAGGGCGAACTTTGCTGGATCATGAGCATCTAGAGG
GTGATACGGATGACGTCTTTTGCATGTCTGATTACTTGAGTTTGTTGCAA
CCGCCCGGTATCCCGGCACATACCATTCGCCTAAAAAAGGGTGTGGTCGT
TATGTTATGCCGGAACCTTTCCATCGATGATAAATTAACGAACGGGTCTA
AGGTCCTTGTTATGGATATCAACGCGTACACGCTGCAAGTGAAAACGCTC
GATGATGGTACCATACATTGGCTCCCGCGCATTACGTTTAAGTTCGTAAC
CTGGCAGGGCGTAGCTGTTAAAAGGGTTCAGTTCCCTGTGCGTCTGTGTT
TTGCTGTCACGGTGCACAGAGCACAAGGCCAGACCTTAGATCGTGTATGT
TTCGATTTGAGTCGCCACCCATTTGCGCATGGGCACGTATATGTAGGGTT
GTCCCGAGTCCGTAAGTCTGCTGACATGATCATTTTTACGACGCCTGATC
GCATAGATGATAAC
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