mRNA_E-fasciculatus_F_contig128.2118.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5KK54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK54_9PHAE) HSP 1 Score: 291 bits (745), Expect = 4.810e-84 Identity = 214/451 (47.45%), Postives = 255/451 (56.54%), Query Frame = 1
Query: 4 TIKGLRHAAVIDAARLASERTAAKTASNEAAALAEALRHNVEGLERTVSTLETAAADDTAMFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHQLENCEREASQARASTLGVRRELASCEDDAAAVDEASSALSLLAAQ----LGGGLQPATSRPAEPTTWEPAGLSAAREARQRTCARLDSVRTTVRTFAAKLEVEQQHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERLDSSAPAGATYERIRTRLEAMQKVALSFVGRLADDLSVCNAQLQNVEERAMDRLEEMMACEAE-----------------------------------ARETDAAYSGCAAGLKRLDSQSLDLVLFLADAAQKAGAPAPFAEALEAPKPPAYGLLGGLFRRQAASNDAAVTGVPARVG 1239
T+KGL+H+A IDAARLASERTAAK AS++AAALA+ LR +V+ L+ TV LET AA D A F T E DLR+EL A+DG ID+LKSTV+ R++LASC+ D A VDEAS LSLLA + L GGLQPAT RPAE TTW AGLSAA EARQRTC E E++ R LEEE++ L+ +VDEAETAADSC+ + LD +T AVL A+++ VG ++ TRL + VALSF +L DDLS C Q+ VEERAMDRLEE MA E E ARET AA+ CAAGL+RLDSQSLDL FLAD A +AGAP A A+EAPKPP YGLL LFR + S+DA V VP+RVG
Sbjct: 91 TVKGLQHSAAIDAARLASERTAAKAASDDAAALAQTLRADVKRLQDTVVNLETVAATDAAKFLTTEVDLRAELVAADGTIDSLKSTVRQ---------------------------------------QRQDLASCQHDMAEVDEASFTLSLLAGESTHLLRGGLQPATPRPAEATTWAAAGLSAAHEARQRTCGH---------------EEEERQRQALEEEMVDLQNEVDEAETAADSCAASLEKLDEQTVAVLTAVEKTVGAQS--------------------TRLGEIGDVALSFTRQLLDDLSGCRQQVVEVEERAMDRLEETMASEEESTYMHSSASCVQACLERSQHHRRERSSGEFVHRRGARETQAAFRACAAGLERLDSQSLDLARFLADKAMQAGAPVSIANAVEAPKPPGYGLLDSLFRPRGVSDDAMVKIVPSRVG 467
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5KS68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS68_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.750e-53 Identity = 127/193 (65.80%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 4 TIKGLRHAAVIDAARLASERTAAKTASNEAAALAEALRHNVEGLERTVSTLETAAADDTAMFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHQLENCEREASQARASTLGVRRELASCEDDAAAVDEASSALSLLAAQ----LGGGLQPATSRPAEPTTWEPAGLSAAREARQRT 570
T+KGL+H AV+DAARLASERTAA TAS++AAALA+ALR EGLE TV+TLETAAA D RT+ESDLR++ A+ G DAL++TV + + A EVAAE S A+ LE QL++ R+ASQ RASTL VR+ELA+CEDD A VDEAS ALSL+AA+ LGGGLQPATSRPAE TT E + LSAA EARQRT
Sbjct: 76 TVKGLQHVAVVDAARLASERTAATTASDDAAALAKALRDTTEGLEGTVATLETAAAADAESCRTMESDLRADFVAAHGTNDALQATVDEQQRAPEVAAERSGLAVRRLEDQLQSSRRDASQGRASTLAVRQELAACEDDVAEVDEASVALSLVAAESTILLGGGLQPATSRPAEVTTREGSDLSAANEARQRT 268
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5K1F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F9_9PHAE) HSP 1 Score: 160 bits (405), Expect = 5.010e-39 Identity = 111/240 (46.25%), Postives = 135/240 (56.25%), Query Frame = 1
Query: 625 EVEQQHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERLDSSAPAGATYERIRTRLEAMQKVALSFVGRLADDLSVCNAQLQNVEERAMDRLEEMMACEAE-----------------------------------ARETDAAYSGCAAGLKRLDSQSLDLVLFLADAAQKAGAPAPFAEALEAPKPPAYGLLGGLFRRQAASNDAAVTGVPARVG 1239
E E++ R LEEE++ L+ +VDEAETAADSC+ + LD +T AVL A+++ VG ++ TRL + VALSF +L DDLS C Q+ VEERAMDRLEE MA E E ARET AA+ CAAGL+RLDSQSLDL FLAD A +AGAP A A+EAPKPP YGLL LFR + S+DA V VP+RVG
Sbjct: 166 EEEERQRQALEEEMVDLQNEVDEAETAADSCAASLEKLDEQTVAVLTAVEKTVGAQS--------------------TRLGEIGDVALSFTRQLLDDLSGCRQQVVEVEERAMDRLEETMASEEESTYMHSSASCVQACLERSQHHRRERSSGEFVHRRGARETQAAFRACAAGLERLDSQSLDLARFLADKAMQAGAPVSIANAVEAPKPPGYGLLDSLFRPRGVSDDAMVKIVPSRVG 385
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5KZR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZR7_9PHAE) HSP 1 Score: 160 bits (406), Expect = 9.370e-37 Identity = 112/193 (58.03%), Postives = 131/193 (67.88%), Query Frame = 1
Query: 4 TIKGLRHAAVIDAARLASERTAAKTASNEAAALAEALRHNVEGLERTVSTLETAAADDTAMFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHQLENCEREASQARASTLGVRRELASCEDDAAAVDEASSALSLLAAQ----LGGGLQPATSRPAEPTTWEPAGLSAAREARQRT 570
T+KGL+H AV+DAAR ASE TAA TAS++AAALA+ALR EGLE TV+TLET RT+ESDLR+EL A+ E S A+ LE QL++ R+ASQ RASTL VR++LASCEDD A VDEAS ALSL+AA+ LGGGLQPATSRPAE TT E + LSAA EARQRT
Sbjct: 23 TVKGLQHVAVVDAARPASESTAATTASDDAAALAQALRDTTEGLEGTVATLETXXXXXXESCRTMESDLRAELVAAHXXXXXXXXXXXXXXXXXXXXXERSGLAVRRLEDQLQSSRRDASQGRASTLAVRQQLASCEDDVAEVDEASVALSLVAAESTILLGGGLQPATSRPAEVTTREGSDLSAANEARQRT 215
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5K5K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5K6_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.210e-32 Identity = 142/321 (44.24%), Postives = 159/321 (49.53%), Query Frame = 1
Query: 904 LADDLSVCNAQLQNVEERAMDRLEEMMACEAE----------------------------------------------------------------ARETDAAYSGCAAGLKRLDSQSLDLVLFLADAAQKAGAPAPFAEALEAPKPPAYGLLGGLFRRQAASNDAAVTGVPARVG------------------------------ARFDGLRDMTAAVMSKFEAYMAACVARNTDSCNCTGPANKAGSSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GTEDKPIAGDSVTEEAESGEPIDDGNDPPLLGE 1569
L D+LS C Q+ VEERAMDRLEE MA E E ARET A + CAAGL+ LDSQSLDL FLAD A +AGAP A A+EAPKPP YGLL FR + S+DA V VP+RVG RF+G+RDMTAA+M KF+A M AC R D CN TGPA K GSS+ XXXXXXXXXXXXXXXXXXXXXX +DK I GD+V EEAES +PIDDGN PP L E
Sbjct: 105 LLDNLSGCRHQVVEVEERAMDRLEEAMASEEEPAKGQVMAGTSGGEGPEWQTTESSDGRKKKKTCTAALHVFKHALSGRNVIAGRGPALGLYTEEGARETQATFRACAAGLEPLDSQSLDLARFLADKAMQAGAPVSVANAVEAPKPPGYGLLDSSFRPRGVSDDATVKTVPSRVGYAFVCVIGCKGRGHARFCRGRSDDCLVVRDPRFNGVRDMTAAIMFKFDADMTACRDRTADGCNGTGPA-KQGSSTDGXXXXXXXXXXXXXXXXXXXXXXNTGSDGAITDMDAAKDDKSIGGDTVAEEAESVQPIDDGNGPPKLVE 424
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: D7FRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE6_ECTSI) HSP 1 Score: 112 bits (279), Expect = 1.350e-21 Identity = 114/370 (30.81%), Postives = 173/370 (46.76%), Query Frame = 1
Query: 115 RHNVEGLERTVSTLETAAADDTAMFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHQLENCEREASQARASTLGVRRELASCEDDAAAVDEASSALSLLAAQL---GGGLQPATSRPAEPTTWEPAGLSAAREARQRTCARLDSVRTTVRTFAAKLEVEQ-------------------------QHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERLDSSAPA-----GATYERIRTRLEAMQKVALSFVGRLADDLSVCNAQLQN-------VEERAMDRLEEMMACEAEARETDAAYSGCAAGLKRLDSQSLDLVLFLADAAQK 1104
R + L+ T + + + AA D E DLR++L + I +L TV + + AA + E A+ L+++L + S R EL CE D A VD AS +LSL A+ G L P T SAA EA Q TCARLD+V+ V A++ E +Q + R LE+++ L E ++D+ +TAADSC+ D D+ +R+ ++ LQE V V L S+AP G+ Y+ IR RLEA+Q++ L+ L ++ C + + +EE+ + +E+ CE E ET A CAA + + S+S+DLV L + A K
Sbjct: 219 RKKILALQLTNNKVLSTAASDKERSARREGDLRAKLDTAGDTIASLTDTVAEQQMAAAMECERFEQALRQLDNEL----------KTSRQAARAELEFCERDLAEVDSASVSLSLFTAEKSHHGDLLAPKTCPVTHVAALGMHDRSAAHEAAQWTCARLDAVQRMVDASASRWEQDQATCLLKEAGARDREVELNRLLDAGEEIRKDLEDDLALSEEELDDTQTAADSCAADFEDISSRSVDLVRTLQEDVEKTAVRVGGLASAAPEAEDLDGSDYDMIRARLEAVQRLVLTATSTLEAEIFTCQGEKADAGDREAEIEEQRQELEDELAVCEEELDETQTAADSCAADFEDISSRSVDLVRTLQEDAAK 578
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: D7FUJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ2_ECTSI) HSP 1 Score: 102 bits (253), Expect = 5.040e-19 Identity = 100/315 (31.75%), Postives = 157/315 (49.84%), Query Frame = 1
Query: 55 SERTAAKTASNEAAALAEALRHNVEGLERTVSTLETAAADDTAMFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHQLENCEREASQARASTLGVRRELASCEDDAAAVDEASSALSLLAAQL---GGGLQPATSRPAEPTTWEPAGLSAAREARQRTCARLDSVRTTVRTFAAK--LEVEQQHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERL---------------DSSAPAG--ATYERIRTRLEAMQKVALSFVGRLADDLSVCNA 933
+ER ++ N A A + LR L T+ +E +AA D + E DL +L ++GAI AL TV + + AA+ +E S A+ + +L+ ++EA+ +RASTL VR EL S E D + D AS +SL AA+ G L+P T + SA+ EA +RT ++D + R + L+V R+ LE+++ L + VDEA +S D+ DLD+R AV +AL V ++ ++ L DS G A Y +R+ LEA+Q++ L+ L +++S C A
Sbjct: 75 TERAKSEADRNLAGAQMQYLREEAGALRATIDYVEESAASDRETWARTEGDLVEKLDTAEGAIAALTETVAEQQLAAQRESERSQLALRLVVGELDVSQQEAAMSRASTLAVREELESWEQDLSDTDSASVDVSLFAAERTNEGHFLEPVTCPAVDVAKLGVNDRSASHEAAERTWCQVDESKARHREMELQCLLDVGNDMRNELEDDLTLCRSNVDEARAITESYGADIEDLDSRALAVALALANNVSEKALVIDSLAHVAQGAVLRVTPAFDSEDRWGSLAGYPMVRSHLEAVQRLVLTTSSTLVEEVSRCEA 389
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: A0A6H5KLL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL6_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.480e-14 Identity = 62/112 (55.36%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 1234 VGARFDGLRDMTAAVMSKFEAYMAACVARNTDSCNCTGPANKAGSSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEDKPIAGDSVTEEAESGEPIDDGNDPPLLGE 1569
+ ARF+G+RDMTAA+MSKF+A MAAC R D CN TGPA K GSS+ SXXXXXXXX +DK I GD+V EEAES +PIDDGNDPP L E
Sbjct: 4 LSARFNGVRDMTAAIMSKFDADMAACRDRTADGCNGTGPA-KQGSSTDSXXXXXXXXGSDGAITDMDVAE-----------DDKSIGGDTVAEEAESVQPIDDGNDPPKLVE 103
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: D7FKZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ4_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 1.670e-9 Identity = 75/283 (26.50%), Postives = 126/283 (44.52%), Query Frame = 1
Query: 541 SAAREARQRTCARLDSVRTTVRTFAAKLEVEQQHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERLDSSAPA-----GATYERIRTRLEAMQKVALSFVGRLADDLSVCNAQLQNVEERA------MDRL-EEMMACEAEARETDAAYSGCAAGLKRLDSQSLDLVLFLADAAQKAGAPAPFAEALEAPKPPAYGLLGGLFRRQAASNDAAVTGVPARVGARFDGLRDMTAAVMSKFEAYMAACVARNTDSCNCTGPA 1353
SAA EA QRTCARLD+VR V A++ E +Q +D+ +T D+C+ D+ D+ +R+ ++ LQE D + AP G+ Y+ IR R E+ Q++AL+ L +++ C + + +R M +L E++ C A + A+ C GL +D SLD + + + G P A + + + R + GV R+ ++F+ +++M+AAV+S C+CTG A
Sbjct: 17 SAAHEASQRTCARLDAVRRMVDESASRWEGDQ----------------LDKTQTDLDACAADIEDIHSRSVNLVRTLQE---DAAKAAVHVGGLAPEVEDRIGSNYDMIRARFESAQRLALTATSTLEEEIFTCQGEKADAVDREVKTDENMRKLNEDLSDCANYADGSHKAWVSCTEGLTSVDRVSLDTYFSVEEITLQVGVFVPRRAASDLEASNIFSVANRADRVEETQQ-----GVLDRLRSQFEDMQEMSAAVVSNM--------------CSCTGQA 261
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI) HSP 1 Score: 62.8 bits (151), Expect = 3.940e-6 Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 625 EVEQQHRHGLEEEVLLLETQVDEAETAADSCSDDVADLDTRTAAVLVALQEGVGDETSGVERLDSSAPA-----GATYERIRTRLEAMQKVALSFVGRLADDLSVCNAQLQNVEERAMDRLEEM 981
E+E+Q R LE+E+ + E ++DE +TAADSC+ D D+ +R+ ++ LQE D R+ AP G+ Y+ IR RLE+ Q++AL+ L +D+ C + + +R + E M
Sbjct: 541 EIEEQ-RQELEDELAVCEEELDETQTAADSCAADFEDISSRSVDLVRTLQE---DAAKMAVRVGGLAPEAEDRIGSDYDMIRARLESAQQLALTVTSTLEEDIFTCQGEKADAVDREVKTGENM 660 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig128.2118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig128.2118.1 >prot_E-fasciculatus_F_contig128.2118.1 ID=prot_E-fasciculatus_F_contig128.2118.1|Name=mRNA_E-fasciculatus_F_contig128.2118.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=464bp MFRTLESDLRSELAASDGAIDALKSTVQDLEGAAEVAAELSVAAIGALEHback to top mRNA from alignment at E-fasciculatus_F_contig128:25212..31227+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig128.2118.1 ID=mRNA_E-fasciculatus_F_contig128.2118.1|Name=mRNA_E-fasciculatus_F_contig128.2118.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:25212..31227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig128:25212..31227+ >mRNA_E-fasciculatus_F_contig128.2118.1 ID=mRNA_E-fasciculatus_F_contig128.2118.1|Name=mRNA_E-fasciculatus_F_contig128.2118.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2784bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:25212..31227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |