mRNA_E-fasciculatus_F_contig128.2117.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D8LCE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE6_ECTSI) HSP 1 Score: 192 bits (487), Expect = 6.790e-57 Identity = 107/191 (56.02%), Postives = 126/191 (65.97%), Query Frame = 3
Query: 204 MRLWTLLTLLASAVLLAPVIGARDKGADLANTSSERDCCAALLLEGEEGTLDAAGKYRLPAICRGVVPEASCPQLLFPSPATTTGEPA-SLAYQNQANLRTDPSCSRVEWDQRCPPGATMLLSKTRGWCRAASCVFAMEDPSVKAGEQSDDE--LLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGK 767
MR WTL+ LA + L G D + E DCCAALL+EGEEG+LDAAGKYRLPAICRGV +C L F + EPA LAY++QA++R PSCS VEW+QRCPPGATMLLSK RG C AA CV A SV G+ D+ +LR +T QVT +L A KPD+P SFY HVRGLRR+F K
Sbjct: 1 MRAWTLV--LACVLPLVLAHGTEDNP----TITPEGDCCAALLVEGEEGSLDAAGKYRLPAICRGVPSPVTCTPLGFTNDHNMVEEPAWLLAYRSQADIRQHPSCSPVEWEQRCPPGATMLLSKKRGGCPAAGCVAATAQESVNVGQDVGDDAAILRAVTGQVTARLRAEKPDLPRSFYWHVRGLRRAFDK 185
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.950e-42 Identity = 102/187 (54.55%), Postives = 118/187 (63.10%), Query Frame = 3
Query: 204 MRLWTLLTLLASAVLLAPVIG-ARDKGADLANTSSERDCCAALLLEGEEGTLDAAGKYRLPAICRGV-VPEASCPQLLFPSPATTT---GEPASLAYQNQANLRTDPSCSRVEWDQRCPPGATMLLSKTRGWCRAASCVFAMEDPSVKAGEQSDDELLRVITAQVTFKLEAAKPDMPPSFYSHVRGL 749
MR WTLL L AVLL V+G A KG D + E DCC ALL+EGEEG+LDAAGKY LP ICRG P +CPQL F SPA + GEPA LA+Q Q++LR D SCS +EW+QRCPPGATMLLSK RG CRAA CV A + + A +L+ V + T KL A PPS VR L
Sbjct: 2 MRSWTLL--LVCAVLL--VLGQAHGKGRD---PTKEEDCCTALLVEGEEGSLDAAGKYVLPTICRGEPAPAMACPQLWFQSPAISDNDIGEPARLAFQQQSDLRADESCSPLEWEQRCPPGATMLLSKKRGGCRAAGCVAAAMEGELTA------QLIDVDEKRFTRKLTKAMKSSPPSDIELVRAL 175
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.150e-42 Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 3
Query: 264 GARDKGADL-ANTSSERD-CCAALLLEGEEGTLDAAGKYRLPAICRGVVPEASCPQLLFPSPATTTGE--PASLAYQNQANLRTDPSCSRVEWDQRCPPGATMLLS-KTRGWCRAASCVFAMEDPSVKAGEQSDDELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGK 767
GA KG + AN + +D CC+ALL+EGE G+LD GKYRLP C G + A CP+L F S A G P+ LA++ QA+LR PSC RVEW++RCPPGATMLL+ K RG CRAA CV +P+ EQ + E+LR +TAQ T L+AAKP P +FY HV G +R++GK
Sbjct: 6 GAHGKGINAPANAITPQDKCCSALLVEGEAGSLDDFGKYRLPPPCGGELAVA-CPRLGFNSAAMNDGSMTPSWLAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGEPNDNKEEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGK 177
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.670e-39 Identity = 99/198 (50.00%), Postives = 122/198 (61.62%), Query Frame = 3
Query: 204 MRLWTLLTLLASAVLLAPVIGARDKGADLANTSSERDCCAALLLEGEEGTLDAAGKYRLPAICRGVVPEASCPQLLFPSPATTTGEPAS----LAYQNQANLRTDPSCSRVEWDQRCPPGATMLLS-KTRGWCRAASCVFAMEDPSVKAGEQSDD----ELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGKV 770
MR W LL L S +L G G AN + E CCAALL+EGE G+LDA GKYRLP C G + A CP+L F + AT + + LA++ QA+LR PSCS +EW++RCPPGATMLL+ K RG CRAA CV GE +DD E+LR +TAQ T L+AAKP MP SFY HV G +R++GK
Sbjct: 1 MRAWMLLLL--SVLLTFGAHGMAINGP--ANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVA-CPKLGF-NAATLHNDGSMTASWLAFRQQADLRLAPSCSPMEWEKRCPPGATMLLAEKRRGGCRAAGCVAV-------GGELNDDNDDNEILRAVTAQQTALLKAAKPAMPKSFYQHVAGRQRAYGKA 185
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D7FRR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR6_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.810e-33 Identity = 76/147 (51.70%), Postives = 92/147 (62.59%), Query Frame = 3
Query: 330 LLEGEEGTLDAAGKYRLPAICRGVVPEASCPQLLFPSPATTTGEPASLAYQNQANLRTDPSCSRVEWDQRCPPGATMLL-SKTRGWCRAASCVFAMEDPSVKAGEQSDDELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGK 767
LLEG G+ GKY+LP CR +V CP L F A +PAS A + Q+ LR D SC R EW+ RCPP +TMLL S+ G C AA CV E S+ G DDELLRVIT++VT +L+A KP + SFY+HVRGLRR F K
Sbjct: 35 LLEGPVGSKGHDGKYQLPVACRDLV---GCPSLGFNPQAHIDIDPASEALRQQSALREDSSCPRAEWEGRCPPSSTMLLASRMGGSCIAAGCVHR-ETQSMVGG---DDELLRVITSEVTERLQAEKPYLTRSFYAHVRGLRRFFAK 174
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D7G532_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G532_ECTSI) HSP 1 Score: 131 bits (329), Expect = 5.360e-32 Identity = 78/152 (51.32%), Postives = 97/152 (63.82%), Query Frame = 3
Query: 327 LLLEGEEGTLDAAGKYRLPAICRGVVPEASCPQLLFPSPATTTG---EPASLAYQNQANLRTDPSCSRVEWDQRCPPGATMLL-SKTRGWCRAASCVFAMEDPSVKAGEQSDDELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGKV 770
LLLEG G+ GKY+LP CR +V CP L F SP + +PAS + Q+ LR DPSC+R EW+ RCPP +TMLL S+ G C A CV + AGE +DELLRVIT++VT +L+A K +M SFY+HVRGLRRSFGK
Sbjct: 34 LLLEGPVGSKGHDGKYQLPVACRDLV---GCPSLGF-SPQASEHIDIDPASETLRQQSALREDPSCTRAEWEGRCPPSSTMLLASRMAGSCIAEGCVH--RETQSMAGED-EDELLRVITSEVTQRLQAEKRNMTKSFYAHVRGLRRSFGKA 178
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: A0A6H5KGK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK1_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.100e-22 Identity = 63/152 (41.45%), Postives = 82/152 (53.95%), Query Frame = 3
Query: 387 ICRGVVPEASCPQLLFPSPATTTGEPAS--LAYQNQANLRTDPSCSRVEWDQRCPPGATMLL-SKTRGWCRAASCVFA------MEDPS------------VKAGEQSDD---ELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGKV 770
I G P +CP+L F + A + LA+Q Q+ LR SC EW+ RCPPGATMLL K RG CRAA C+ A + D S V G+ ++D E+LR +TAQ T L+AAKP +P +FY HV G +R+ G V
Sbjct: 4 IYSGGEPAVACPKLGFNAAAIHDDAMTASWLAFQQQSGLRAAESCPPTEWEDRCPPGATMLLVEKRRGGCRAAGCIAAGGELNDVRDGSAFPLAVLVCYALVDHGQNNEDDEWEILRAVTAQQTALLQAAKPTLPKTFYQHVAGQQRACGXV 155
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: D7FRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE6_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.430e-20 Identity = 58/127 (45.67%), Postives = 75/127 (59.06%), Query Frame = 3
Query: 414 SCPQLLFPSPATTTGEPAS--LAYQNQANLRTDPSCSRVEWDQRCPPGATMLLS-KTRGWCRAASCVFAMEDPSVKAGEQSDD------ELLRVITAQVTFKLEAAKPDMPPSFYSHVRGLRRSFGK 767
+CP+L F + A + LA+Q Q+ LR SC EW+ RCPPGA MLL+ K RG CRAA CV GE +D+ E+LRV+TAQ T L+AAKP MP +FY HV G +R++ K
Sbjct: 13 ACPKLGFNAAAINDDAMTASWLAFQQQSGLRAAESCPPAEWEDRCPPGAIMLLAEKRRGGCRAAGCVAV-------GGELNDNNKDDEWEILRVVTAQQTALLQAAKPTMPKTFYQHVAGQQRAYAK 132
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: A0A6H5JU04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU04_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 6.440e-9 Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 3
Query: 387 ICRGVVPEASCPQLLFPSPATTTGEPAS--LAYQNQANL---RTDPSCSRVEWDQRCPPGATMLLS-KTRGWCRAASCVFA 611
I G P +CP+L F + A + LA+Q Q+ L R SC EW+ RCPPGATMLL+ K RG CRAA C+ A
Sbjct: 4 IYSGGEPAVACPKLGFNAAAIHDDAMTASWLAFQQQSGLFGLRAAESCPPTEWEDRCPPGATMLLAEKRRGGCRAAGCIAA 84
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Match: A0A6H5JIA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA9_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 2.220e-7 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 3
Query: 204 MRLWTLLTLLASAVLLAPVIGARDKGADLANTSSERDCCAALLLEGEEGTLDAAGKYRLPAI 389
MR W+L+ + P++ A D NT E DCCAALL+EGEEG+LDAAGKYRLP I
Sbjct: 1 MRAWSLIL-----ACVLPLVLAHGTEDDPINTP-EGDCCAALLVEGEEGSLDAAGKYRLPPI 56 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig128.2117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig128.2117.1 >prot_E-fasciculatus_F_contig128.2117.1 ID=prot_E-fasciculatus_F_contig128.2117.1|Name=mRNA_E-fasciculatus_F_contig128.2117.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=196bp MISSASAMRLWTLLTLLASAVLLAPVIGARDKGADLANTSSERDCCAALLback to top mRNA from alignment at E-fasciculatus_F_contig128:21671..23197+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig128.2117.1 ID=mRNA_E-fasciculatus_F_contig128.2117.1|Name=mRNA_E-fasciculatus_F_contig128.2117.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1527bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:21671..23197+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig128:21671..23197+ >mRNA_E-fasciculatus_F_contig128.2117.1 ID=mRNA_E-fasciculatus_F_contig128.2117.1|Name=mRNA_E-fasciculatus_F_contig128.2117.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig128:21671..23197+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |