mRNA_E-fasciculatus_F_contig12779.2110.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12779.2110.1
Unique NamemRNA_E-fasciculatus_F_contig12779.2110.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A6H5KQY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY3_9PHAE)

HSP 1 Score: 566 bits (1458), Expect = 2.220e-196
Identity = 405/473 (85.62%), Postives = 410/473 (86.68%), Query Frame = 1
Query:    1 QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSHASRLSRFSSGSNGGAPDGTMAKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFYVRSSFALSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHTLADSLFCVFFSVVWRPAAALLLCAELVTSLLLALSRAFAKDLRPLLWWLLPTLLLGGAALEHRPTATEG 1419
            QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFL+ESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPS DEEEA GLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMA EGI+HTCSH SRLSRFSS S G APD TMAK+S         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         QFYVR SF LSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYH LADSLFCVFF+VVWRPAAALLLCAELVTSLLLA SRAFAKDLRPLLWWLLPTLLLGGAALEHRP AT+G
Sbjct:   10 QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSFDEEEARGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIDHTCSHVSRLSRFSSSSTGCAPDSTMAKDSVLEGGASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARRGNEGVGLKSTTAREDGQGRRNGVGQER---------QFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGGAALEHRPIATQG 473          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: D7FRC4_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC4_ECTSI)

HSP 1 Score: 563 bits (1450), Expect = 7.630e-196
Identity = 318/473 (67.23%), Postives = 324/473 (68.50%), Query Frame = 1
Query:    1 QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSHASRLSRFSSGSNGGAPDGTMAKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFYVRSSFALSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHTLADSLFCVFFSVVWRPAAALLLCAELVTSLLLALSRAFAKDLRPLLWWLLPTLLLGGAALEHRPTATEG 1419
            +IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFL+ESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDG+DLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGG KTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMA EGIEHTCSH SRLS+FSS SNG APD TMAK+S          XXXXXXXXXXX                                                                                                                              QFYVR SF LSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYH LADSLFCVFF+VVWRPAAALLLCAELVTSLLLA SRAFAKDLRPLLWWLLPTLLLG AALEH PTA EG
Sbjct:   52 KIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGDDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGRKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIEHTCSHVSRLSKFSSSSNGCAPDSTMAKDSVLEGGASALRXXXXXXXXXXXRRGNEGGVGLKSTTAREDGEGRRNGGGQEG------------------------------------------------------------------------------------------------QFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGEAALEHWPTAMEG 428          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A835ZCR0_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR0_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.650e-28
Identity = 69/187 (36.90%), Postives = 98/187 (52.41%), Query Frame = 1
Query:    4 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSH 564
            ++   K++ +P+      +G   G F I ++  + +  C+ +        P G LT V++ + G +++R   FRD   L DA+  S A  P+       G+ C DG  SE    P LD       +TV ++P Y S A IRPSRYVP+ W  LPP DP +IDWLYDLGY DAL WM +  + H C H
Sbjct:   74 VIAYVKSTVLPQV-----WGSPAGPFRITRYCRDCMARCVNLGAAAEL--PHGELTAVVTQLSGLRALRVSAFRDAAHLADAVLASAAAIPIASAIRLDGRWCVDGGLSE--FHPRLDPTLG---ETVYVNPFYFSHADIRPSRYVPVWWAFLPPRDPNSIDWLYDLGYSDALDWMRRRRLAHCCKH 248          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A7S3URP2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URP2_HETAK)

HSP 1 Score: 115 bits (289), Expect = 9.930e-25
Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   73 GMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSH 564
            G F I  ++   L A   + +  +     GRL V  +S+  ++S+R   F    D+   L  SCA FPL  P V   +R   G++ +G  +   D +     +T+T++PL+   A I+PSRYVP  W ALPP DP  IDWL+DLGY+D L WMAK G  HTC+H
Sbjct:  114 GPFKINSYVDRCLDAATDLSKYEQAN---GRLFVQTTSLPRFQSVRVSRFESALDMKTTLLASCAAFPLS-PLV---RRLDGGLYVDGGLS---DFQPILSKRTITVNPLWFWKADIKPSRYVPAIWAALPPKDPSTIDWLFDLGYKDCLSWMAKNGYAHTCTH 267          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A835Z0V0_9STRA (PNPLA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.810e-19
Identity = 60/161 (37.27%), Postives = 78/161 (48.45%), Query Frame = 1
Query:   82 YIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSH 564
            Y+    + ++   L  +  G  T+   R+T VL      +S R   F   E  +D L  S A  PL       G  C DG  S+    P      A   +T+ +SP Y   A I+PSRYVP+ W  LPP   G IDWLYDLGYRDAL WM + G++  C H
Sbjct:  635 YVRDCAIRTMDLDLATQLRGEVTAVMTRVTPVL------RSERVSFFESREHCVDVLLASTAAVPLASAINVDGGWCIDGGLSDFQPRPVPKGNVA---ETIFVSPFYLVDADIKPSRYVPVWWAFLPPPHSGTIDWLYDLGYRDALLWMQRRGLDFCCDH 786          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A2D4BZR4_PYTIN (PNPLA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZR4_PYTIN)

HSP 1 Score: 96.7 bits (239), Expect = 9.350e-19
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    7 VEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLV-LPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTAS-IRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGI 546
            ++   TS++P+A A+     + G F + +FL++++   + + RV      P R+T+V SS+    + RA  F   E+L+  L  SC   P   LP    G+   DGV  +  +APS  ++    L TV ISP  ++  S I+PSRYV   W   PP  P  +DW+Y LGY DAL W+   G 
Sbjct:   65 MQSVTTSYVPQARAS-----LLGPFRMREFLVDAVRRHMNLHRVHELNVTPPRVTIVYSSLSARTARRASRFASSEELLQTLMASCCASPFAGLPFKLHGEWVADGVLYD--NAPSFHDDPE--LPTVRISPQVSAVHSDIKPSRYVHPWWYIYPPA-PEDVDWVYRLGYFDALQWLDANGF 236          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A662WWA0_9STRA (PNPLA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWA0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.130e-18
Identity = 60/183 (32.79%), Postives = 92/183 (50.27%), Query Frame = 1
Query:    1 QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLV-LPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGI 546
            +I +    S++P AH     G   G F +  +L++++      + + +     G++TVV +S+  W S R   F++   ++  +  SC   PLV LP    G+   DG   +  + P  +     G+ T+T+SP   S A IRPSRYVP  W   PP+    + WLYDLGY DAL W  +EG 
Sbjct:  179 EICDSVINSYVPAAH-----GSWKGPFNMRDYLVDAITRHANTDNIHKLE---GKVTVVYTSLSAWASRRVSHFKNPVHMLHTMVASCCATPLVGLPFEHEGEYVIDGGLLD--NQPLFE-----GIPTITVSPNVFSGADIRPSRYVPAWWSMYPPSQRD-MQWLYDLGYEDALSWCIREGF 345          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A1V9YNE4_9STRA (Patatin-like phospholipase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNE4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 8.420e-18
Identity = 58/174 (33.33%), Postives = 85/174 (48.85%), Query Frame = 1
Query:   28 FIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLV-LPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGI 546
            F+P A A+     + G   +  +L E++      ER+    +   R  VV SS+  W+S R   FR+     DA+  SC   P+   P    G+  FDG           D +      T+T+SP Y +TA I+PS+YVP+ W   PP  P +I WLY+LG RDA+ W   +G+
Sbjct:   68 FVPLARAS-----LGGACNVRSYLREAIARYGNFERI-TELNATERCVVVYSSISKWRSRRVTRFRNATHATDAVLASCCATPIAGFPFRIDGEWVFDGGI--------FDFQPVVDASTITVSPFYCTTADIKPSQYVPMWWAVYPPA-PESIQWLYELGQRDAIAWAKAKGL 226          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: A0A7S4D9M8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9M8_HETAK)

HSP 1 Score: 96.3 bits (238), Expect = 1.030e-17
Identity = 63/206 (30.58%), Postives = 99/206 (48.06%), Query Frame = 1
Query:   19 KTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLV-LPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSHASRLSRFSSGSNGGAPDGTMAKN 633
            KT  IP    +    F +G F + + +  +L   + + R     +   +L +  + +  ++ +    +   +DL  +L  SCA FP   L     G    DG++S     P L         T+T+SPLY STA I+PSRY+PL W   PP DP  +DWL+DLGY D L WM K   ++ C+H   ++ +     GG   G + ++
Sbjct:   87 KTVLIPECWQS----FCWGAFKLQECIDRTLDVSVDLSRFELANN---KLFIQTTKMPFFEPVLLSSYESEKDLKTSLMASCAAFPFSNLVKRIDGAWYIDGIYSG--FQPRLSPS------TITVSPLYFSTADIKPSRYLPLMWTLFPPKDPSTVDWLFDLGYVDCLRWMYKH--DYRCTHTHEVNAY-----GGKQSGNIGED 270          
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Match: H3GIV2_PHYRM (PNPLA domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIV2_PHYRM)

HSP 1 Score: 96.3 bits (238), Expect = 1.110e-17
Identity = 58/182 (31.87%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    4 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLV-LPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMAKEGI 546
            I +     ++P AHA+       G F +  +L++++     V+ + +     G++TVV +S+  W + R   F+    L+  +  SC   PLV +P    G+   DG   +  + P  ++    G++T+T++P   +TA IRPSRYVP  W   PP+    + WLYDLGY DAL W  +EG+
Sbjct:  152 ICDSVINDYVPAAHASW-----KGPFKMRDYLIDAITRHGKVDNMDKLH---GKVTVVYTSLSSWVTRRVSHFKSPVHLLHTMVASCCATPLVGMPFEHEGEYVIDGGLLD--NQPLFED----GVRTITVTPNVFATADIRPSRYVPPWWSMYPPSQRD-MQWLYDLGYEDALSWCVREGL 318          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12779.2110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KQY3_9PHAE2.220e-19685.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRC4_ECTSI7.630e-19667.23PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZCR0_9STRA4.650e-2836.90Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
A0A7S3URP2_HETAK9.930e-2539.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z0V0_9STRA1.810e-1937.27PNPLA domain-containing protein n=1 Tax=Tribonema ... [more]
A0A2D4BZR4_PYTIN9.350e-1934.62PNPLA domain-containing protein n=1 Tax=Pythium in... [more]
A0A662WWA0_9STRA7.130e-1832.79PNPLA domain-containing protein n=2 Tax=Nothophyto... [more]
A0A1V9YNE4_9STRA8.420e-1833.33Patatin-like phospholipase n=1 Tax=Achlya hypogyna... [more]
A0A7S4D9M8_HETAK1.030e-1730.58Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
H3GIV2_PHYRM1.110e-1731.87PNPLA domain-containing protein n=1 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12779contigE-fasciculatus_F_contig12779:1890..3790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score564.7
Seed ortholog evalue4.1e-158
Seed eggNOG ortholog2880.D7FRC4
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K16816
KEGG ReactionR02250,R02687
KEGG Pathwayko00561,ko01100,ko04714,ko04923,map00561,map01100,map04714,map04923
KEGG ModuleM00098
EggNOG free text desc.triglyceride catabolic process
EggNOG OGsKOG3773@1,KOG3773@2759
EC3.1.1.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcyl transferase/acyl hydrolase/lysophospholipase
Ec32 orthologEc-26_002630.1
Exons2
Model size1420
Cds size1419
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927783.760612-CDS-E-fasciculatus_F_contig12779:1890..29371622927783.760612-CDS-E-fasciculatus_F_contig12779:1890..2937Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12779 1891..2937 -
1695995692.6097581-CDS-E-fasciculatus_F_contig12779:1890..29371695995692.6097581-CDS-E-fasciculatus_F_contig12779:1890..2937Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12779 1891..2937 -
1622927783.7731616-CDS-E-fasciculatus_F_contig12779:3418..37901622927783.7731616-CDS-E-fasciculatus_F_contig12779:3418..3790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12779 3419..3790 -
1695995692.6198733-CDS-E-fasciculatus_F_contig12779:3418..37901695995692.6198733-CDS-E-fasciculatus_F_contig12779:3418..3790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12779 3419..3790 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12779.2110.1prot_E-fasciculatus_F_contig12779.2110.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12779 1891..3790 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12779.2110.1

>prot_E-fasciculatus_F_contig12779.2110.1 ID=prot_E-fasciculatus_F_contig12779.2110.1|Name=mRNA_E-fasciculatus_F_contig12779.2110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=473bp
QIVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLMESLLACLPVERVGRNT
SPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFR
GKRCFDGVFSEGPSAPSLDEEEAGGLKTVTISPLYASTASIRPSRYVPLS
WIALPPNDPGAIDWLYDLGYRDALFWMAKEGIEHTCSHASRLSRFSSGSN
GGAPDGTMAKNSSSAVVSEAGAAALCSTDSSSSDDEDDKNDGDDENDNRL
ASDRATPSNPTTSASGSSSSSNSSSGSTSSSSKETASSVVPSVAPGNNSS
GLDEGNNRNESLSSSSSSPSSSCLGAAARQGNEGSGPTTTMTTREDGEGR
RNGGGQEKKQFYVRSSFALSGCRMRPRRERHAELDAPRFVPSLEKFVGHG
SYHTLADSLFCVFFSVVWRPAAALLLCAELVTSLLLALSRAFAKDLRPLL
WWLLPTLLLGGAALEHRPTATEG
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mRNA from alignment at E-fasciculatus_F_contig12779:1890..3790-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12779.2110.1 ID=mRNA_E-fasciculatus_F_contig12779.2110.1|Name=mRNA_E-fasciculatus_F_contig12779.2110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1901bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12779:1890..3790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGATAGTGGAGCAGGCCAAGACGAGCTTCATACCCCGGGCGCACGCCGC GAGGTTCTTCGGGTTCGTATACGGCATGTTCTACATCGGCCAGTTCCTCA TGGAGTCCTTGCTCGCGTGCCTGCCCGTCGAGAGGGTGGGCCGCAACACG TCCCCGCCCGGCCGGCTGACGGTGGTCCTGTCCTCCGTGCTCGGCTGGAA GTCGATCCGCGCCAAGGAGTTCCGCGACGGGGAGGACCTCATCGACGCGC TGCGGTGCTCGTGCGCGTGCTTCCCCCTGGTGCTGCCGCATGTGTTCCGC GGGAAGCGGTGCTTCGACGGGGTCTTCTCGGAGGGACCGAGCGCTCCCAG CCTCGACGAGGAGGAGGCTGGGGTGAGGAGGAGAAGTGATTTTTCTTGGA CGACTACAGATGAGGGAGGGGTGGGGGGAGTACCTATGTTTTCCATGCCC TCTTTGTCGTTAGACGCGACGGAGCATTGTTCCCACCGGAGGACCATCAC CAACGGCCATCGCTTTGCCAAAGGTGGCTCAATTGCATTTCCCTATCCTA CCACAAGCGCGCCAGTCAGGTGGGGGTAATGCCAAGACCAAGACGAACCC AACCTGGATGGGTTTTTTTCACTACAGCATTACCGCCCGGCACGTTCGGT GTTTTTCTTGTCTTCGCGCTGCAACATTGTTCCGGTCCTTGCTCAGCACC AGTACATAGTGACAACAACAACAACAACAACAACAACGTGCGAAGGAGTG CCTGCTTCGATCTTCGGCTCGCGTCTAACCGGCCCCCCACCACCATGGCA CTTGCTTGTTCTCGCGCACACGTACATCCATACCAACCGCGCCACTTTGT CAGGGACTCAAGACGGTGACCATCAGTCCGCTGTACGCCAGCACCGCGTC GATCCGCCCTTCCCGGTACGTGCCCCTCTCCTGGATCGCCCTGCCTCCGA ACGACCCCGGGGCGATCGACTGGCTCTACGACCTGGGGTACCGCGACGCA CTCTTCTGGATGGCCAAGGAAGGGATCGAGCACACCTGCTCGCACGCGTC CAGGCTCTCCAGGTTCTCCAGCGGCAGCAACGGAGGCGCTCCCGATGGCA CCATGGCCAAGAACAGCAGCAGCGCTGTTGTTTCAGAGGCCGGAGCAGCC GCCCTCTGCAGCACAGACAGCAGCAGCAGTGATGACGAAGACGACAAAAA CGACGGAGACGACGAGAACGACAATAGGTTGGCGTCGGACAGGGCTACAC CCTCGAACCCGACGACGTCTGCTAGCGGCAGCAGCAGCTCGTCGAACTCT TCTTCTGGCAGTACTTCTTCTTCATCGAAGGAAACGGCGTCGTCTGTTGT TCCGTCGGTGGCTCCTGGTAACAATAGCAGCGGCTTGGACGAGGGGAACA ACCGCAATGAATCGCTGTCATCGTCCTCGTCATCGCCGTCGTCCTCGTGT TTGGGTGCTGCAGCCAGACAAGGCAACGAAGGATCAGGACCAACGACAAC AATGACGACACGAGAAGACGGCGAGGGGAGAAGAAACGGAGGCGGCCAAG AGAAGAAGCAGTTCTACGTCAGGTCGTCCTTCGCCCTGTCCGGCTGCCGC ATGCGTCCCCGCCGGGAGCGGCACGCCGAGCTCGACGCCCCCCGCTTCGT CCCCTCCCTCGAGAAGTTCGTGGGCCACGGGAGCTACCACACCCTGGCCG ACTCCCTGTTCTGCGTCTTCTTCAGCGTCGTCTGGCGCCCCGCCGCCGCC CTCCTCCTCTGCGCCGAGCTCGTCACGAGCCTCCTCCTGGCGTTGTCGCG GGCGTTCGCGAAGGACCTCCGGCCGCTGCTGTGGTGGCTCCTCCCGACCC TTCTCCTGGGAGGGGCCGCCCTGGAGCACCGGCCAACCGCCACGGAGGGC G
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12779:1890..3790-

>mRNA_E-fasciculatus_F_contig12779.2110.1 ID=mRNA_E-fasciculatus_F_contig12779.2110.1|Name=mRNA_E-fasciculatus_F_contig12779.2110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2838bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12779:1890..3790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGATAGTGGAGCAGGCCAAGACGAGCTTCATACCCCGGGCGCACGCCGC
GAGGTTCTTCGGGTTCGTATACGGCATGTTCTACATCGGCCAGTTCCTCA
TGGAGTCCTTGCTCGCGTGCCTGCCCGTCGAGAGGGTGGGCCGCAACACG
TCCCCGCCCGGCCGGCTGACGGTGGTCCTGTCCTCCGTGCTCGGCTGGAA
GTCGATCCGCGCCAAGGAGTTCCGCGACGGGGAGGACCTCATCGACGCGC
TGCGGTGCTCGTGCGCGTGCTTCCCCCTGGTGCTGCCGCATGTGTTCCGC
GGGAAGCGGTGCTTCGACGGGGTCTTCTCGGAGGGACCGAGCGCTCCCAG
CCTCGACGAGGAGGAGGCTGGGCAGATAGTGGAGCAGGCCAAGACGAGCT
TCATACCCCGGGCGCACGCCGCGAGGTTCTTCGGGTTCGTATACGGCATG
TTCTACATCGGCCAGTTCCTCATGGAGTCCTTGCTCGCGTGCCTGCCCGT
CGAGAGGGTGGGCCGCAACACGTCCCCGCCCGGCCGGCTGACGGTGGTCC
TGTCCTCCGTGCTCGGCTGGAAGTCGATCCGCGCCAAGGAGTTCCGCGAC
GGGGAGGACCTCATCGACGCGCTGCGGTGCTCGTGCGCGTGCTTCCCCCT
GGTGCTGCCGCATGTGTTCCGCGGGAAGCGGTGCTTCGACGGGGTCTTCT
CGGAGGGACCGAGCGCTCCCAGCCTCGACGAGGAGGAGGCTGGGGGACTC
AAGACGGTGACCATCAGTCCGCTGTACGCCAGCACCGCGTCGATCCGCCC
TTCCCGGTACGTGCCCCTCTCCTGGATCGCCCTGCCTCCGAACGACCCCG
GGGCGATCGACTGGCTCTACGACCTGGGGTACCGCGACGCACTCTTCTGG
ATGGCCAAGGAAGGGATCGAGCACACCTGCTCGCACGCGTCCAGGCTCTC
CAGGTTCTCCAGCGGCAGCAACGGAGGCGCTCCCGATGGCACCATGGCCA
AGAACAGCAGCAGCGCTGTTGTTTCAGAGGCCGGAGCAGCCGCCCTCTGC
AGCACAGACAGCAGCAGCAGTGATGACGAAGACGACAAAAACGACGGAGA
CGACGAGAACGACAATAGGTTGGCGTCGGACAGGGCTACACCCTCGAACC
CGACGACGTCTGCTAGCGGCAGCAGCAGCTCGTCGAACTCTTCTTCTGGC
AGTACTTCTTCTTCATCGAAGGAAACGGCGTCGTCTGTTGTTCCGTCGGT
GGCTCCTGGTAACAATAGCAGCGGCTTGGACGAGGGGAACAACCGCAATG
AATCGCTGTCATCGTCCTCGTCATCGCCGTCGTCCTCGTGTTTGGGTGCT
GCAGCCAGACAAGGCAACGAAGGATCAGGACCAACGACAACAATGACGAC
ACGAGAAGACGGCGAGGGGAGAAGAAACGGAGGCGGCCAAGAGAAGAAGC
AGTTCTACGTCAGGTCGTCCTTCGCCCTGTCCGGCTGCCGCATGCGTCCC
CGCCGGGAGCGGCACGCCGAGCTCGACGCCCCCCGCTTCGTCCCCTCCCT
CGAGAAGTTCGTGGGCCACGGGAGCTACCACACCCTGGCCGACTCCCTGT
TCTGCGTCTTCTTCAGCGTCGTCTGGCGCCCCGCCGCCGCCCTCCTCCTC
TGCGCCGAGCTCGTCACGAGCCTCCTCCTGGCGTTGTCGCGGGCGTTCGC
GAAGGACCTCCGGCCGCTGCTGTGGTGGCTCCTCCCGACCCTTCTCCTGG
GAGGGGCCGCCCTGGAGCACCGGCCAACCGCCACGGAGGGCGGACTCAAG
ACGGTGACCATCAGTCCGCTGTACGCCAGCACCGCGTCGATCCGCCCTTC
CCGGTACGTGCCCCTCTCCTGGATCGCCCTGCCTCCGAACGACCCCGGGG
CGATCGACTGGCTCTACGACCTGGGGTACCGCGACGCACTCTTCTGGATG
GCCAAGGAAGGGATCGAGCACACCTGCTCGCACGCGTCCAGGCTCTCCAG
GTTCTCCAGCGGCAGCAACGGAGGCGCTCCCGATGGCACCATGGCCAAGA
ACAGCAGCAGCGCTGTTGTTTCAGAGGCCGGAGCAGCCGCCCTCTGCAGC
ACAGACAGCAGCAGCAGTGATGACGAAGACGACAAAAACGACGGAGACGA
CGAGAACGACAATAGGTTGGCGTCGGACAGGGCTACACCCTCGAACCCGA
CGACGTCTGCTAGCGGCAGCAGCAGCTCGTCGAACTCTTCTTCTGGCAGT
ACTTCTTCTTCATCGAAGGAAACGGCGTCGTCTGTTGTTCCGTCGGTGGC
TCCTGGTAACAATAGCAGCGGCTTGGACGAGGGGAACAACCGCAATGAAT
CGCTGTCATCGTCCTCGTCATCGCCGTCGTCCTCGTGTTTGGGTGCTGCA
GCCAGACAAGGCAACGAAGGATCAGGACCAACGACAACAATGACGACACG
AGAAGACGGCGAGGGGAGAAGAAACGGAGGCGGCCAAGAGAAGAAGCAGT
TCTACGTCAGGTCGTCCTTCGCCCTGTCCGGCTGCCGCATGCGTCCCCGC
CGGGAGCGGCACGCCGAGCTCGACGCCCCCCGCTTCGTCCCCTCCCTCGA
GAAGTTCGTGGGCCACGGGAGCTACCACACCCTGGCCGACTCCCTGTTCT
GCGTCTTCTTCAGCGTCGTCTGGCGCCCCGCCGCCGCCCTCCTCCTCTGC
GCCGAGCTCGTCACGAGCCTCCTCCTGGCGTTGTCGCGGGCGTTCGCGAA
GGACCTCCGGCCGCTGCTGTGGTGGCTCCTCCCGACCCTTCTCCTGGGAG
GGGCCGCCCTGGAGCACCGGCCAACCGCCACGGAGGGC
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