prot_E-fasciculatus_F_contig12776.2109.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12776.2109.1
Unique Nameprot_E-fasciculatus_F_contig12776.2109.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length205
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12776.2109.1 vs. uniprot
Match: A0A6H5L054_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L054_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.070e-73
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:    6 RVDGEDINSDDTYTLETIEVFKAEEPGPNEYDEVGSQFEITTAGNSGLCGVYMDTTDGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELEEGCDDYDPCNGECGEFQVC 119
            RVDGEDINSDD YTLETIEVFKAE+PGPNEYDE GSQFEITTAGNSGLCGVYMD  DGSTEYLIDLNRQSDGSLRAAGICGVFR+WDEADRAELEEGCDDYDPCNGECGEFQVC
Sbjct:    9 RVDGEDINSDDIYTLETIEVFKAEDPGPNEYDEAGSQFEITTAGNSGLCGVYMDA-DGSTEYLIDLNRQSDGSLRAAGICGVFREWDEADRAELEEGCDDYDPCNGECGEFQVC 121
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BLAST of mRNA_E-fasciculatus_F_contig12776.2109.1 vs. uniprot
Match: D7FR36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR36_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 8.250e-72
Identity = 102/111 (91.89%), Postives = 105/111 (94.59%), Query Frame = 0 
Query:   62 DGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELEEGCDDYDPCNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTLTYPPCSESDVCGPVATCGEEEG 172
            DGSTEYLIDLNRQSDGSLRAAGICGVFR+WDEADR ELEEGCDDYDPCNGECGEFQVCSRSYFSYS ASYFCSDTCDPSPCSEGEECTLTYP CS S+VCGPVA CGE +G
Sbjct:    4 DGSTEYLIDLNRQSDGSLRAAGICGVFREWDEADRVELEEGCDDYDPCNGECGEFQVCSRSYFSYSDASYFCSDTCDPSPCSEGEECTLTYPVCSASEVCGPVADCGEGDG 114
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BLAST of mRNA_E-fasciculatus_F_contig12776.2109.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 4.820e-8
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0 
Query:  109 CNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTLTYPPCSESDVCGPVATCGEEEGGETPAPSST 181
            C G C EFQ C     +++   Y+CS  CDPSPC +GEECTL    C+   +CG  + C       +P P++T
Sbjct:  273 CEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSIC-------SPLPAAT 338
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12776.2109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L054_9PHAE4.070e-7394.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR36_ECTSI8.250e-7291.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2B7_ECTSI4.820e-839.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 2..109
e-value: 1.4E-5
score: 27.1
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 10..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12776contigE-fasciculatus_F_contig12776:116..3173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12776.2109.1mRNA_E-fasciculatus_F_contig12776.2109.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12776 116..3173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12776.2109.1 ID=prot_E-fasciculatus_F_contig12776.2109.1|Name=mRNA_E-fasciculatus_F_contig12776.2109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=205bp
VRSLGRVDGEDINSDDTYTLETIEVFKAEEPGPNEYDEVGSQFEITTAGN
SGLCGVYMDTTDGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELE
EGCDDYDPCNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTL
TYPPCSESDVCGPVATCGEEEGGETPAPSSTPGPETAPPIASDEEEEVTL
PPTNE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold