mRNA_E-fasciculatus_F_contig1277.2107.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1277.2107.1
Unique NamemRNA_E-fasciculatus_F_contig1277.2107.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1277.2107.1 vs. uniprot
Match: A0A6H5L7T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T0_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 4.680e-163
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 2 
Query:  272 MANPYTSEVPLPALREHFATALVSYPNMTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSS 994
            MANPYTSEVPLPALREHFATA VSYPNMTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSS
Sbjct:    1 MANPYTSEVPLPALREHFATAFVSYPNMTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSS 241
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1277.2107.1 vs. uniprot
Match: D8LKV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV2_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.080e-131
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 2 
Query:  353 MTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKV 946
            MTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLT+GIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAK+
Sbjct:    1 MTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTIGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKI 198
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1277.2107.1 vs. uniprot
Match: A0A835YLM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLM2_9STRA)

HSP 1 Score: 181 bits (459), Expect = 8.130e-51
Identity = 97/203 (47.78%), Postives = 134/203 (66.01%), Query Frame = 2 
Query:  353 MTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPR-DPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPS 958
            MTAG A      A D  +  +RQ+L  H I + VFDMDLTVT  H+ G L + D  T+ SY++S R TDA+  ++LC  LG+ +G+ATFQ+EVDD+AH+GG+ LVR+ L  +G  D + +  +VALT  +Y  M+ +Q++Y KNDM+R LFER G  + P +TLL+DDT RN+ AF  IGGHGL + G  G+ L N   V P+
Sbjct:    1 MTAGTAV-----AAD--LTAIRQYLQEHDIRYVVFDMDLTVTSEHSGGMLLKMDRMTLFSYMDSARDTDALAVIQLCAELGIRMGVATFQKEVDDAAHVGGTPLVRQALQRLGI-DAIEEGSIVALTREEYKVMVTNQDTYNKNDMLRTLFERWGVEFDPTHTLLVDDTVRNIRAFASIGGHGLAIHGHSGMQLDNVTFVSPA 195
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1277.2107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7T0_9PHAE4.680e-16399.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKV2_ECTSI1.080e-13198.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLM2_9STRA8.130e-5147.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1277contigE-fasciculatus_F_contig1277:5608..12477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-11_005680.1
Exons4
Model size1508
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1277.2107.1prot_E-fasciculatus_F_contig1277.2107.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1277 5879..12131 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927783.4999533-UTR-E-fasciculatus_F_contig1277:5607..58781622927783.4999533-UTR-E-fasciculatus_F_contig1277:5607..5878Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1277 5608..5878 +
1695995692.4406645-UTR-E-fasciculatus_F_contig1277:5607..58781695995692.4406645-UTR-E-fasciculatus_F_contig1277:5607..5878Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1277 5608..5878 +
1622927783.5633466-UTR-E-fasciculatus_F_contig1277:12131..124771622927783.5633466-UTR-E-fasciculatus_F_contig1277:12131..12477Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1277 12132..12477 +
1695995692.4852493-UTR-E-fasciculatus_F_contig1277:12131..124771695995692.4852493-UTR-E-fasciculatus_F_contig1277:12131..12477Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1277 12132..12477 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927783.5185084-CDS-E-fasciculatus_F_contig1277:5878..60681622927783.5185084-CDS-E-fasciculatus_F_contig1277:5878..6068Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 5879..6068 +
1695995692.4492347-CDS-E-fasciculatus_F_contig1277:5878..60681695995692.4492347-CDS-E-fasciculatus_F_contig1277:5878..6068Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 5879..6068 +
1622927783.5310113-CDS-E-fasciculatus_F_contig1277:6445..65491622927783.5310113-CDS-E-fasciculatus_F_contig1277:6445..6549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 6446..6549 +
1695995692.4575944-CDS-E-fasciculatus_F_contig1277:6445..65491695995692.4575944-CDS-E-fasciculatus_F_contig1277:6445..6549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 6446..6549 +
1622927783.5411363-CDS-E-fasciculatus_F_contig1277:10969..113471622927783.5411363-CDS-E-fasciculatus_F_contig1277:10969..11347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 10970..11347 +
1695995692.4676857-CDS-E-fasciculatus_F_contig1277:10969..113471695995692.4676857-CDS-E-fasciculatus_F_contig1277:10969..11347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 10970..11347 +
1622927783.5517018-CDS-E-fasciculatus_F_contig1277:11912..121311622927783.5517018-CDS-E-fasciculatus_F_contig1277:11912..12131Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 11913..12131 +
1695995692.4776733-CDS-E-fasciculatus_F_contig1277:11912..121311695995692.4776733-CDS-E-fasciculatus_F_contig1277:11912..12131Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1277 11913..12131 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1277.2107.1

>prot_E-fasciculatus_F_contig1277.2107.1 ID=prot_E-fasciculatus_F_contig1277.2107.1|Name=mRNA_E-fasciculatus_F_contig1277.2107.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=297bp
MANPYTSEVPLPALREHFATALVSYPNMTAGNAAIEQECALDPAMAELRQ
HLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTM
KLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVV
ALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVE
AFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSSAHHSTTATT
SASVTSQQHQHEGGTYPDHRQQQQQHQHQHYPGQPPPAAGYGYGYY*
back to top

mRNA from alignment at E-fasciculatus_F_contig1277:5608..12477+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1277.2107.1 ID=mRNA_E-fasciculatus_F_contig1277.2107.1|Name=mRNA_E-fasciculatus_F_contig1277.2107.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1277:5608..12477+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGTAGCGCCACCGCATCATCTCGGCCCGCGTGCGCCTCGTACTCTCTCAG
CGCTCCACAGCCCGTCCTCTTTCTACAATCTGCGCCCACGATACGGCTGT
TGTCGTCTAAAACTTGAACCTGCGGCTGGTTCCCACCATCTCTCGTCTGT
CTGTCCTCCAGGTTCTCAAAAGAGCTCACCTGCTTGTCACGTATCACGTA
CCTGTGGTATACAAGAGATCGGCCCCAACAGGGAACGAAATAAAGAGGAC
ACACACACACGGCGGATAGAGATGGCCAATCCCTACACATCAGAAGTCCC
TCTCCCGGCACTGCGAGAGCACTTCGCCACGGCCTTAGTCTCATATCCCA
ACATGACGGCGGGAAACGCCGCGATCGAGCAGGAGTGCGCGCTGGATCCA
GCGATGGCGGAGCTCCGGCAGCACCTACTCCGGCATCGCATCACCTTCTG
CGTCTTTGACAGTAAGTTTTTGCAGTCACACAACGTAGCAGCGGCACGCT
CTTTCGCTACGAAACCACCTTGTTGCTGTCTCTCTTGTTGCGCGGGTCTA
GCAGCAGCAGCAGCGGCAGCAGTGGCAACAGCAGCAGCAGCAGCAGCAGC
AGCAGTAGTTGTACGGCAAGGGCCTTGTGTGGTCGACATACCGTAGCTTG
TAGGCAAGGTTCGTGAGACGCGCGTGCACAAACGAAAACCATGCGTTTTT
CTTGTCTCCACACAAATCATGGATAGAGCTGTGGAAGATGTGCCACAGCC
CACTCTCTCTCCCCGATATTAATGGCCCGAAACTTCCTCCGTGCCTCCTG
CCGCTTTCTGCACATGCGTGCCGCTTGCCCCACCAAAGTGGATTTGACCG
TGACGAAAATGCACACGAGAGGAGCCTTGCCTCGCGATCCGGACACCATG
AGGTCCTACCTCGAATCCGGGCGTGCGACGGATGCCGTCAAGGTGAGAAA
ATCTGTCTTTCGGCTTGCGGAACTGGTCCGGTTTGACCACACGGGAGGTT
GCATCACAATATGGTATGCATAAAAGAGGAGAGGTTGCACACAACCAGGT
GCACGGCCTCGTCGTGTCGGGAAATAAATTGTCCGGGCAGCAGCAGTGAC
AGGTGCGATGGGGCTGCCTGCGGCCGCGGGGCTGCACTGGCCCAGCACGA
GGAGGGTGGTAAAGAAGACATCCTTTCAGTTTCGTCTCCCTCGTACAAAT
AGCTTTCTGATTCTGTTGAATTGGCTCTCCTCGCCAGTCCCTCGCCCATT
TGGAACGACAGCAGTTCGTTCAACCTTTGACTGCTCGCGAAAATCGGAAA
CTTCGAAAAGTCAAGTTCCACATACACACACACACACCGACCTCGTGTTG
CATGAACGTGTGCTACCAGTATGCCACGCCAGCACCCGACGTTGTCGGAC
TTTCGCTGCAGCAGAGCGAGAACGCACTATCGCTCCACATGCTGCTGCTG
TTAGTCTACCTGCCACGCGCCGTGCTACTTAGCCCCACGCGGTGCTGTGC
TTTCTTGCATGCATAATATACTCATGTGTGCCATGGACGAAGGTCGGACA
AAATATGATTTGCCAACCCTCGCATGGGTGGGGAGCCAGCTTGTTTCAAA
TTCTTGGTGGGGTCGTTTTTGGGGAGCGCGTGTGTGTGTGTCTCTGCCCG
CCACACCGCACCACACCTGTGGGAGAGAAAATGTCAGCTCCGAAGAGTCC
AAATATGTTTTGTAGGGCAAGTTTTGACCCCGGGCGAAATACACTAGCTC
TGCAGCAGCAGTGAGCGTGGTCATAGGATACAAAACGCTTCCAATTTGTT
TCCTACCACCATTTTCCCGCCACACTGGTGGGGGGGGGCTGCTGCACTAT
ACTATATGTGTTGATACGATACGATACACAGAGGCGGGACAACTAAAGTG
GAACAGATGTACAGCAGTAGTAGAGCATCCGCCATGTATGTGTCTTTCTT
GTCGAATCACAGACAAAACAGAGAGACGCCGATGCTACGCATATGTACCC
AGATGGAGACGATTTGCCCCTGTCCCCAAGTCTTGCGTGTAGCCTTTCTG
TGGTACATACCCGTTGTCTTTGGGGCATTCATGCCTGCTCCACGTGTTGC
AAGTTCATGAACAATCTGGCGCCCTTTTTAGGTGGCAAGTTGCCTCCCCT
CTCCATCCGTGCTTGGAACGTAACGGATGTATCCAAGAACAAGGAAGCAG
CGTCTGTGTCCGTTGAAGTCGTTTCTAGTCCACTCGAGGCACTACAATAG
TGACCCGTTCATGGTTTATGGTCCAACATGCCCGGGGCAACACTCAGTGA
TGCCGGACTCCGAACCAAAGCAGTCTTGTCTTCGACAGGGGGTAGCAACA
ACAACAGTGATATCTGCAAGGATCTCGGCGTTCTGAATTTTCGCAGTGGC
TATCGGTGGAAATGGCGTGCTGGGTTATTTTTTCAATCATGTTCGAAACA
GCAGAAGCTGCCGGGCCCCATGGTAGAATAGGTGGGTGAGAGGGGTTGGC
CCGGCCCGTGTTCGGCGTTGAAGATTGTATGCATGCATGAAACACGTGCT
GGTAAACGGCTCGGAGCTCGGAGTTTGATTGGAACCAGGTTGACTGTTCG
TGGGCGTCGAAACCAAAACCTTGCTCGTAACCTCATCACAAGTATGTAGA
CTTCTGATCAGTACGCAGCCAGAGAACTCGCCTCCTCGCGGCATTTCAAC
CCCGCTACTGCCGATCTAAGATCCTCTTACGTGTAGAGAGTCGCCCTGCT
TCCCTTAAAGTTTTCGGCTAGAGATACCTGGATACGCGTAAGCCTCCCAC
CATAGTTGTGTTTTCCTGTCGTGTATCGCTCCTTTTTTTAGCATATTAGT
TGTTCCCCGACTGCACCTGGTATATATAGCGAGCATGACGTGCACGCACG
AAGAAAGAAACCGTCGGTGTTTTTTAAAGACAAACCAGCCAGGGTTCGGT
ACTTGCTGTGCTTTTTTGTCCCACGGGAGAGCCCTCTCCCCTTTGTTGAC
TGCTGTTGAGTCGAGGTGTGGGTACCCACGACAAAAAGTTTGCCATTTGT
TGCCTGGGCATTGCAGGACAGGACAAAATCGCGAGTCGTGTACATGGTTG
CTGTGATGAGAATCGAACTCACGTCCACACACATGCTACGCCAGGAGGTT
GTTGCTAGATGTCCAACTGCACGTACTCTCAGCGGCAACCTTCCCAACGG
CCTTCTCTACGTGTGTTTCTTATTCTTTGGCGAGACCTGTTCTCCTCTTT
GTGACCCCGATTTTCCATTAAAACGGCACGTGTGTATTTCGTCAGCAACA
CCAACACTTTGATTTGAGCACAAGCTGTTTGGCGTGTTTGAGACGATACG
TCTCTTCGAAACGAACGGCCGTCCACCACTCACAACAAGATGTAGGCCAT
CACGTTGCAGACACAAGTTGTCCCCTCCTTTTTCACCCCGCTTTCCCAAG
CACTGCTGCCAATAGCTTAGAGCAAGCACTGCTAATACCTTCGTACAAGT
GTCCCCTCGTTTTTCGAGGTGGTATGGCTTGCAGAATTTTCAACACGTTG
TGCATTTACGCGGGACTCTTCTGTGGTTTGCCTTGTGACAACTTCTTGTC
TTCATTCAGGAATTTAGGATAAAGACCATGGTCAGAGTACCGTAGATGTG
CGCGCGATAGCCCCCCCCCCCCCTCCTCCTAGATTGGGTTACAAACGCTG
GTGTTCCACACATATTGAGAAGGTGCGAAAAACAATCGATCCATTCGTGC
GAGGAAAGGCTGTGCAGGATATTTTCCGAAACCACCATTTTCGTCATGCG
CAGCCTCTTGGCTGTGGAGCTACAGGCACGTTTTGGAGAGGTGGGGGGCA
TGCGCACGAGAACACGGGGAGCCCCCGCCGTACGGTGCCCAAACTGTTCC
GAATTTGATTCTGCCGCTCGGGCACATCGGCGTTCTTTTAAGTTCGGGCC
CGCCTTCCAGCCACAAATAACCTTCGCGACCCGGGGTTCGACAGACTACC
AGCACTGCTGTCCGATATCACTGAGATAATTTTCCCCACAACATTATTCG
ATTCATTTACTTGTTGCCCACCGAGCATCCAAACCGGTGTCTCCCCCTTC
CGGCCGATAGCATACCCCCACGTGACCATTCTCAACACTTTCCGAAGCTT
TCGCGTCCCACGCCCCATGCGAAAGGTTCCCGACGTCCCCACGGGGAAAC
TTGGTGTGATGTATTGTAGTTTGTGTACAACTGCTGCTCTCACCCCCCAT
GGAAAATTCTTCCATGTTGTGGAGACCGCGCTCGGGGAAATCATCGTTGA
CGCGCACCGGACAAGGCGCGAGGGGCGCAACTTGCTAGCTCTCACACTCG
CTGCATCGCTTTATCCGACCGGCCATGCATGCTCTTTTGAATCGTTCCAT
GCTCGGTGTTTTTCGATGCCAACCTAGCGTCGTTATTTTTTCGCGATGCG
GACATTTTTTTTTTTTTTCCAAACACAGAACACATTTCTTTTCTTGCGAG
TATCTTGACGCAGTATGGTGTCTTCTTGCAGCCGGTGTTCGCATTGTGTA
TCGTCGATTGGCACGCAAGTATACCAACAACCCAACAGCAGCCAGTGTGT
TTTGTTTATCAGCTCCCTCGGCTTCCGCGGGATACTACATGTACATACCT
AGAGCGTCACGCGCCTCTACCGGCGGGGGTGGCTTTGTCTTTCGCAGGCC
GCATGCGCCTGTGATTGTCATGCCCCCGCAACCATAGTTTAGCCGAGAGC
ACGGGTGCCTCGCGGTCTTCGTGGGTGATGTGGATGGTCAGGCATCAGGA
AGCGGCAGCAAGTTGCTCCCTTCCTTCGATCTTGTCTGGCGCCGGTCGGT
CAACGATGTTTTTCATCGAGCGTGAATTCCTCTTTTTTTGTGTAGCTCAC
GGCAAACGAACATGTAGGTGAGCGCGTGAAAGATCGGGCTACTCTTCGAT
TTCCCACGGGCATGTCGGGAGGCTTTCTTGGGTTTCACGTGGACGCGAGC
TCCGGACATGTTGACATGTTCCAAGGTGGCCGAGGGGGGGATATTTTGAT
ATTTTCGGCCAAGACGGGGTGCGCCGGTGGATACTGCTGTGGGCCAAATA
TATGAAGCGAATCAGCGTTGAGGGGAATATACACCCGCGACTTGATGGCA
CATGGCCGTGAGTCCGACCCGGATTCGCCGAGAGTCTGGTGAACCGGCGG
GCCTGATTTTGGGCTTCCGCTGCCTCGGTTTTCTGCTCGAGAATTGCTCG
CGAACATCCCTGCTCACTCATGATCTCCCCGATCTCTCGAATTTGCTTTC
ATCTTTTCCCCACTGCTGCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCTA
TCTCGCGCCCAGACGATGAAGCTGTGCCGAGCTCTCGGCCTTACCGTAGG
GATCGCGACGTTCCAGAGAGAGGTGGACGACTCGGCGCACATCGGCGGCT
CGCACCTCGTCCGGCGCGTCCTCGGGGCGATCGGCGCGGGGGACCTGGTG
AGCGACCGGGACGTGGTCGCCCTGACCTCCTCGCAGTACTCGGAGATGAT
CCGGCACCAGGAGAGCTACACCAAGAACGACATGATCCGCGTGCTGTTCG
AGAGGCGGGGGGAGGCGTACTCCCCGGGGAACACGCTGCTGATCGACGAC
ACCCGGCGGAACGTCGAGGCCTTCGTTAGGATAGGCGGCCACGGGCTCCT
CGTGGAGGGGGGTCAGGGGTTGATCCTGCGGAACGCGAAGGTTTGTTTAT
TCGCGCCGCTCGGTGGTAGATAGACCCGCTGTGTTCGAGTCGCGTCTGTG
GTCTTGTGTTGGTGTGAATGTAGAGACGACGAGGGCGAGAATAGTTTTAC
GGCGTACAGGGCATTTTACGTGTTTGTCCGTTCAATGAAGCTGATGTCCC
GTCGTTTTTTTTTTCTGGGACGACTAGCGGTATCCCTCTTGCGCCTCCCC
CACTGCCTCCCTGGTTCTTGGTCGAATGTCGCTCCTTCGATTAGGGGGCG
CGCTCCTCGGTTTTATCCTCACTCTTTCTCGAACCCTCTGAGGTTAGCGC
TGTGCTCCTTCTGAAGAGGCGCGACATATTTGACACTCCACGTGTATGAG
CCCGCACTACACCATGACACCAATATCGCTGCTGTAAGTACATGGTATGT
ATCTTCGACGCACACGTGCAGTTGATACGCGCGGCTGAGCACCGCCTCAG
GTGCGTTTTTTTCCTTTCCCGACTGGGTTCGCATATCTGTACTGTATGAT
TAACGCCGTTCTTTCTTTTTACTTTGTCCCCTCCGGACACCGCCGTGTGG
GACAGGTGGTCGAGCCCAGCTGTACATTTGTGCCGGGGTTGACGTTTTCC
TCGTCGGCACACCACTCCACAACAGCAACGACGTCGGCATCGGTGACCTC
CCAGCAACATCAGCACGAGGGTGGCACGTACCCGGATCACCGGCAGCAGC
AGCAACAGCATCAACACCAGCACTACCCGGGGCAGCCGCCTCCGGCTGCA
GGATATGGGTACGGGTACTACTGAAGGTGGTGTTGGTGGTGGTGGGTAGG
AGGAGAGGCAGGTCGCTGCCTGCCACGTGTGCGTGTTTCGATTTTTCGGT
GGAATTCGTTGTTCCGAAACATTTTGGGCGACTCGCGCGAAGGGGAGTGC
TGGGAGAGAGGGGCGGGCGGGATCTCGGCTGACAGATTGATTCGGTCGCA
GCACCGGCAGGTTGCGTCCGGGGCATGTGCGATGTTGATAGTGCCTGGGC
GGGGACTTGGCGTGAGAACGCCGACGGTATTGGTGGGCGTGTCAAGGGCG
GGGGGAGGAAGAAGAGGTTAGAGCCTTGCCTTTCCACACGGTGGCGTGTA
GCTAGGCTGTTCACCTTGCT
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1277:5608..12477+

>mRNA_E-fasciculatus_F_contig1277.2107.1 ID=mRNA_E-fasciculatus_F_contig1277.2107.1|Name=mRNA_E-fasciculatus_F_contig1277.2107.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1782bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1277:5608..12477+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCCAATCCCTACACATCAGAAGTCCCTCTCCCGGCACTGCGAGAGCA
CTTCGCCACGGCCTTAGTCTCATATCCCAACATGACGGCGGGAAACGCCG
CGATCGAGCAGGAGTGCGCGCTGGATCCAGCGATGGCGGAGCTCCGGCAG
CACCTACTCCGGCATCGCATCACCTTCTGCGTCTTTGACAATGGCCAATC
CCTACACATCAGAAGTCCCTCTCCCGGCACTGCGAGAGCACTTCGCCACG
GCCTTAGTCTCATATCCCAACATGACGGCGGGAAACGCCGCGATCGAGCA
GGAGTGCGCGCTGGATCCAGCGATGGCGGAGCTCCGGCAGCACCTACTCC
GGCATCGCATCACCTTCTGCGTCTTTGACATGGATTTGACCGTGACGAAA
ATGCACACGAGAGGAGCCTTGCCTCGCGATCCGGACACCATGAGGTCCTA
CCTCGAATCCGGGCGTGCGACGGATGCCGTCAAGTGGATTTGACCGTGAC
GAAAATGCACACGAGAGGAGCCTTGCCTCGCGATCCGGACACCATGAGGT
CCTACCTCGAATCCGGGCGTGCGACGGATGCCGTCAAGACGATGAAGCTG
TGCCGAGCTCTCGGCCTTACCGTAGGGATCGCGACGTTCCAGAGAGAGGT
GGACGACTCGGCGCACATCGGCGGCTCGCACCTCGTCCGGCGCGTCCTCG
GGGCGATCGGCGCGGGGGACCTGGTGAGCGACCGGGACGTGGTCGCCCTG
ACCTCCTCGCAGTACTCGGAGATGATCCGGCACCAGGAGAGCTACACCAA
GAACGACATGATCCGCGTGCTGTTCGAGAGGCGGGGGGAGGCGTACTCCC
CGGGGAACACGCTGCTGATCGACGACACCCGGCGGAACGTCGAGGCCTTC
GTTAGGATAGGCGGCCACGGGCTCCTCGTGGAGGGGGGTCAGGGGTTGAT
CCTGCGGAACGCGAAGACGATGAAGCTGTGCCGAGCTCTCGGCCTTACCG
TAGGGATCGCGACGTTCCAGAGAGAGGTGGACGACTCGGCGCACATCGGC
GGCTCGCACCTCGTCCGGCGCGTCCTCGGGGCGATCGGCGCGGGGGACCT
GGTGAGCGACCGGGACGTGGTCGCCCTGACCTCCTCGCAGTACTCGGAGA
TGATCCGGCACCAGGAGAGCTACACCAAGAACGACATGATCCGCGTGCTG
TTCGAGAGGCGGGGGGAGGCGTACTCCCCGGGGAACACGCTGCTGATCGA
CGACACCCGGCGGAACGTCGAGGCCTTCGTTAGGATAGGCGGCCACGGGC
TCCTCGTGGAGGGGGGTCAGGGGTTGATCCTGCGGAACGCGAAGGTGGTC
GAGCCCAGCTGTACATTTGTGCCGGGGTTGACGTTTTCCTCGTCGGCACA
CCACTCCACAACAGCAACGACGTCGGCATCGGTGACCTCCCAGCAACATC
AGCACGAGGGTGGCACGTACCCGGATCACCGGCAGCAGCAGCAACAGCAT
CAACACCAGCACTACCCGGGGCAGCCGCCTCCGGCTGCAGGATATGGGTA
CGGGTACTACTGAGTGGTCGAGCCCAGCTGTACATTTGTGCCGGGGTTGA
CGTTTTCCTCGTCGGCACACCACTCCACAACAGCAACGACGTCGGCATCG
GTGACCTCCCAGCAACATCAGCACGAGGGTGGCACGTACCCGGATCACCG
GCAGCAGCAGCAACAGCATCAACACCAGCACTACCCGGGGCAGCCGCCTC
CGGCTGCAGGATATGGGTACGGGTACTACTGA
back to top