mRNA_E-fasciculatus_F_contig1277.2106.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A6H5LEG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEG1_9PHAE) HSP 1 Score: 204 bits (519), Expect = 5.340e-58 Identity = 133/191 (69.63%), Postives = 140/191 (73.30%), Query Frame = 2
Query: 95 MKSTLVLIWVAALSLANGANGFFMPAAGSLVGGASSASRASPRIATRSSTADGGACGAGCSCASCFRAHGRSCTCPSCSS-GVSGRSCSAGCRGCGACSVRMKAHRDGCACCADTTSPGCRSNASCECPDCGVLKSRPSSRRAAYSVTVMGMGGGEGEGVLRQRLADEPESVQFEDTMAAIAQGFNYVPKR 664
MKS+LVLI AALSL+NG NGFF+PAAGSLVGGASSASRAS I+ S A GA CSCASC SS GVS RSCSAGCR C CSVRMKAHRDG DTTSPG ASCECPDCGVLKS SRR A SVTVM MGGGEG+ LRQRL DEPESVQFEDTMAAIA+GF+YVPKR
Sbjct: 1 MKSSLVLICAAALSLSNGVNGFFVPAAGSLVGGASSASRASHSISMSSI-----AHGARCSCASCAGVXXXXXXXXXXSSTGVSRRSCSAGCR-CAGCSVRMKAHRDG----EDTTSPGGH-RASCECPDCGVLKSLSRSRRGASSVTVMSMGGGEGDRALRQRLVDEPESVQFEDTMAAIAEGFDYVPKR 180
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: D8LKV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV3_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.060e-57 Identity = 129/191 (67.54%), Postives = 142/191 (74.35%), Query Frame = 2
Query: 95 MKSTLVLIWVAALSLANGANGFFMPAAGSLVGGASSASRASPRIATRSSTADGGACGAGCSCASCFRAHGRSCTCPSCSS-GVSGRSCSAGCRGCGACSVRMKAHRDGCACCADTTSPGCRSNASCECPDCGVLKSRPSSRRAAYSVTVMGMGGGEGEGVLRQRLADEPESVQFEDTMAAIAQGFNYVPKR 664
M+S++VLI AALSLANG N FF+PAA LVGGASSASR S ++T S A GA CSCASC HGR SS G+SGRSCSAGCR C CS+RMKA RD DTTSP A+C+CPDCGVLKSRP SR AA SV +M MGGGEGEGVLRQRLADEPESVQFEDTMAAIA+GF+YVPKR
Sbjct: 1 MRSSVVLICAAALSLANGVNAFFVPAAARLVGGASSASRVSHIVSTSSI-----AHGARCSCASCAGVHGRXXXXXXXSSAGISGRSCSAGCR-CTGCSMRMKAQRDR----EDTTSP-VGQRATCQCPDCGVLKSRPRSRGAASSVMMMSMGGGEGEGVLRQRLADEPESVQFEDTMAAIAEGFDYVPKR 180
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A835YL21_9STRA (HopJ type III effector protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL21_9STRA) HSP 1 Score: 138 bits (348), Expect = 8.090e-35 Identity = 60/106 (56.60%), Postives = 77/106 (72.64%), Query Frame = 2
Query: 581 RLADEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
RLA ++V FEDTM IA + + PK F NG+ + AG NEGSCKVF+FGK+ L TL+CFG+HYR VLA+P G +H NIR+FM +GWGGV FP+G+ L+PK
Sbjct: 18 RLAQASDAVTFEDTMEVIAANYEFAPKPFTNGDVHNAAGTNEGSCKVFSFGKLAALDEASTLSCFGQHYRDVLADPAGAAHANIRSFMEAGWGGVHFPEGVALTPK 123
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A7S3XKA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKA2_HETAK) HSP 1 Score: 129 bits (324), Expect = 7.320e-31 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 2
Query: 581 RLADEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
+L P+ V FE+TM I+ ++Y K F NGE S+ AG N GSCKVF+FGK+ LS + TL CFGEHYR VL++PDG +HGNIR FM GW G++F +GL L+ K
Sbjct: 69 KLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 174
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A4Q7YNP1_9GAMM (HopJ type III effector protein n=1 Tax=Fluviicoccus keumensis TaxID=1435465 RepID=A0A4Q7YNP1_9GAMM) HSP 1 Score: 125 bits (313), Expect = 3.570e-30 Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 2
Query: 611 FEDTMAAIAQGFNYVPKRFVNGETS---SDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
FEDT+A I + Y P RF NG T S+AG NEGSC++FAFG++ GLS EDTL CFG HYR VLA+PDG SHGNIR FM GW G+ F DG LSPK
Sbjct: 16 FEDTIALINALYEYRPTRFSNGLTDTLVSEAGQNEGSCRIFAFGQLNGLSAEDTLRCFGRHYRDVLADPDGSSHGNIRRFMRDGWAGIAF-DGPVLSPK 113
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A1H4GGC3_9GAMM (HopJ type III effector protein n=2 Tax=Marinobacterium georgiense TaxID=48076 RepID=A0A1H4GGC3_9GAMM) HSP 1 Score: 124 bits (311), Expect = 6.460e-30 Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 2
Query: 599 ESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
+S+ FEDTMA I++ F+Y P F NGE ++AG NEGSCK+F FGK++ L TLACFG YR VLA PDG HGNIR FM SGW G+ F +G PL K
Sbjct: 14 DSIDFEDTMAVISEHFDYAPCAFNNGEIFNEAGQNEGSCKIFGFGKLMELDEAQTLACFGRFYRDVLATPDGTDHGNIRNFMQSGWAGIQF-EGEPLRRK 112
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: UPI001C07D86F (HopJ type III effector protein n=1 Tax=Amphritea atlantica TaxID=355243 RepID=UPI001C07D86F) HSP 1 Score: 122 bits (307), Expect = 2.540e-29 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 2
Query: 590 DEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHY-RGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
D+P S+ FEDT+A I ++Y P RF+NG+ ++AG NEGSCK+FAF ++ LS + TL CFG Y + VLA P+G HGNIR F+A GW GV F D PLSPK
Sbjct: 11 DQPNSIDFEDTIAVIEANYDYTPTRFMNGQLINEAGTNEGSCKIFAFAQLNNLSKQQTLNCFGRFYHQDVLAHPNGSDHGNIRNFIAHGWSGVSF-DKAPLSPK 113
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A7Y4A5Z9_9VIBR (HopJ type III effector protein n=1 Tax=Vibrio sp. RE86 TaxID=2607605 RepID=A0A7Y4A5Z9_9VIBR) HSP 1 Score: 122 bits (306), Expect = 3.270e-29 Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 2
Query: 584 LADEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYR-GVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
L+++P S+QFEDTMA I F++ P F NG T ++A N GSCK+FAFG++ GLSPE TLACFG+ YR VL PDG+ H NIR F+ GW G++F +G L K
Sbjct: 10 LSEQPTSIQFEDTMAVIEANFDFAPTAFKNGNTLNEANQNNGSCKIFAFGQVKGLSPEATLACFGKFYREDVLGNPDGDDHANIRNFIEFGWSGIEF-EGEALKVK 114
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: A0A2E9DDM5_9GAMM (Type III effector n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A2E9DDM5_9GAMM) HSP 1 Score: 122 bits (305), Expect = 4.080e-29 Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 2
Query: 572 LRQRLADEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPLSPK 898
L RL + E++ FED +A I + F Y P F NG+ ++AG NEGSCK+ AFG++ GLS TLACFG YR VLA P+G HGNIR FM GW G+ F +G+PL+P+
Sbjct: 6 LTARLGTD-ETIDFEDVIAFIGEHFEYTPCAFRNGDLHNEAGQNEGSCKILAFGQLAGLSEAQTLACFGRFYRDVLATPEGSDHGNIRNFMDKGWSGIRF-EGIPLAPR 112
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Match: UPI000475B552 (HopJ type III effector protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI000475B552) HSP 1 Score: 122 bits (305), Expect = 4.740e-29 Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 2
Query: 572 LRQRLADEPESVQFEDTMAAIAQGFNYVPKRFVNGETSSDAGANEGSCKVFAFGKIVGLSPEDTLACFGEHYRGVLAEPDGESHGNIRAFMASGWGGVDFPDGLPL 889
L ++L ES+QF +A I + Y P+ F NG SS AG NEGSCKVFAFG + GL+ E TL CF EHYR VLA P+G +H NIRAFM SGW G+ F D +PL
Sbjct: 6 LLEQLDQPAESLQFSQVIAVIDAHYAYTPQAFQNGALSSPAGTNEGSCKVFAFGLLQGLTQEQTLHCFAEHYRAVLAHPEGHNHANIRAFMLSGWEGIQF-DTMPL 110 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1277.2106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1277.2106.1 >prot_E-fasciculatus_F_contig1277.2106.1 ID=prot_E-fasciculatus_F_contig1277.2106.1|Name=mRNA_E-fasciculatus_F_contig1277.2106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp MKSTLVLIWVAALSLANGANGFFMPAAGSLVGGASSASRASPRIATRSSTback to top mRNA from alignment at E-fasciculatus_F_contig1277:179..4788+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1277.2106.1 ID=mRNA_E-fasciculatus_F_contig1277.2106.1|Name=mRNA_E-fasciculatus_F_contig1277.2106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4610bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1277:179..4788+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1277:179..4788+ >mRNA_E-fasciculatus_F_contig1277.2106.1 ID=mRNA_E-fasciculatus_F_contig1277.2106.1|Name=mRNA_E-fasciculatus_F_contig1277.2106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1614bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1277:179..4788+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |