prot_E-fasciculatus_F_contig12762.2103.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig12762.2103.1
Unique Name	prot_E-fasciculatus_F_contig12762.2103.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	144

Homology

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 3.440e-92
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK
Sbjct:  261 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 404

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 4.300e-87
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK
Sbjct: 1082 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 1225

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A7S1CEK9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEK9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.570e-83
Identity = 131/144 (90.97%), Postives = 138/144 (95.83%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            MSKM+PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRGPE+VSAREWMRICFELLEMLKAHKKAIRRA VNTFGYIAKAIGPQDVL+TLL NL+VQERQNRVCTTVAIAIVAETCAPFTV+PALMNE+R P  NVQNGVLK
Sbjct:  223 MSKMQPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLEMLKAHKKAIRRATVNTFGYIAKAIGPQDVLYTLLQNLRVQERQNRVCTTVAIAIVAETCAPFTVLPALMNEYREPLQNVQNGVLK 366

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: G5A4J4_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G5A4J4_PHYSP)

HSP 1 Score: 268 bits (684), Expect = 2.480e-82
Identity = 134/144 (93.06%), Postives = 139/144 (96.53%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            MSKM PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG + VSAREWMRICFELL+MLKAHKK IRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETC+PFTVVPALMNE+RVPELNVQNGVLK
Sbjct:  567 MSKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGADLVSAREWMRICFELLDMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVVPALMNEYRVPELNVQNGVLK 710

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A7S0BEV1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEV1_9RHOD)

HSP 1 Score: 249 bits (636), Expect = 6.540e-82
Identity = 125/144 (86.81%), Postives = 135/144 (93.75%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            ++KM PPI +LLPRLTPILKNR EKVQENCIDLVGRIADRG E+VS+REWMRICFELLE+LKA KKAIRRAAV+TFGYIAKAIGP DVL TLLNNLKVQERQ RVCTTVAIAIVAETC PFTV+PALMNE+R+PELNVQNGVLK
Sbjct:   72 IAKMTPPIQDLLPRLTPILKNRQEKVQENCIDLVGRIADRGAEYVSSREWMRICFELLELLKAPKKAIRRAAVSTFGYIAKAIGPSDVLATLLNNLKVQERQQRVCTTVAIAIVAETCQPFTVLPALMNEYRIPELNVQNGVLK 215

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A1D2AGN1_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AGN1_AUXPR)

HSP 1 Score: 256 bits (654), Expect = 7.300e-82
Identity = 129/144 (89.58%), Postives = 137/144 (95.14%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            M++M PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG E V AREWMRICFELL+ML+A KKAIRRAAVNTFGYIAKAIGPQDVL TLLNNLKVQERQ+RVCTTVAIAIVAETCAPFTV+PALMNE+RVPELNVQNGVLK
Sbjct:  141 MTRMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLDMLRAFKKAIRRAAVNTFGYIAKAIGPQDVLVTLLNNLKVQERQSRVCTTVAIAIVAETCAPFTVLPALMNEYRVPELNVQNGVLK 284

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: F0W6T1_9STRA (Uncharacterized protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T1_9STRA)

HSP 1 Score: 270 bits (689), Expect = 2.020e-81
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            M+KM PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG E VSAREWMRICFELLEMLKAHKK IRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETC+PFTVVPALMNE+RVPELNVQNGVLK
Sbjct:  939 MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVSAREWMRICFELLEMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVVPALMNEYRVPELNVQNGVLK 1082

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A024G627_9STRA (SF3b1 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G627_9STRA)

HSP 1 Score: 270 bits (689), Expect = 2.070e-81
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            M+KM PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG E VSAREWMRICFELLEMLKAHKK IRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETC+PFTVVPALMNE+RVPELNVQNGVLK
Sbjct:  943 MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVSAREWMRICFELLEMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVVPALMNEYRVPELNVQNGVLK 1086

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A067CFU9_SAPPC (Splicing factor 3B subunit 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFU9_SAPPC)

HSP 1 Score: 268 bits (686), Expect = 5.220e-81
Identity = 134/144 (93.06%), Postives = 139/144 (96.53%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            M+KM PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG E VSAREWMRICFELLEMLKAHKK IRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETC+PFTV+PALMNE+RVPELNVQNGVLK
Sbjct:  937 MAKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAELVSAREWMRICFELLEMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVIPALMNEYRVPELNVQNGVLK 1080

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BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Match: A0A6G3MDM4_HENSL (Splicing factor 3B subunit 1 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MDM4_HENSL)

HSP 1 Score: 262 bits (670), Expect = 6.340e-81
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0

Query:    1 MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK 144
            M+KM PPI +LLPRLTPILKNRHEKVQENCIDLVGRIADRG EHVSAREWMRICFELLE+LKAHKK+IRRAA NTFGYIAKAIGPQDVL TLL+NLKVQERQNRVCTTVAIAIVAETC+PFTV+PAL+NE+RVPELNVQNGVLK
Sbjct:  478 MNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEHVSAREWMRICFELLELLKAHKKSIRRAACNTFGYIAKAIGPQDVLATLLSNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALLNEYRVPELNVQNGVLK 621

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig12762.2103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FI13_ECTSI	3.440e-92	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JJ74_9PHAE	4.300e-87	100.00	TOG domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A7S1CEK9_9STRA	2.570e-83	90.97	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
G5A4J4_PHYSP	2.480e-82	93.06	Uncharacterized protein n=2 Tax=Phytophthora TaxID...	[more]
A0A7S0BEV1_9RHOD	6.540e-82	86.81	Hypothetical protein (Fragment) n=1 Tax=Rhodosorus...	[more]
A0A1D2AGN1_AUXPR	7.300e-82	89.58	Uncharacterized protein (Fragment) n=1 Tax=Auxenoc...	[more]
F0W6T1_9STRA	2.020e-81	93.75	Uncharacterized protein AlNc14C26G2567 n=1 Tax=Alb...	[more]
A0A024G627_9STRA	2.070e-81	93.75	SF3b1 domain-containing protein n=1 Tax=Albugo can...	[more]
A0A067CFU9_SAPPC	5.220e-81	93.06	Splicing factor 3B subunit 1 n=4 Tax=Saprolegniace...	[more]
A0A6G3MDM4_HENSL	6.340e-81	90.28	Splicing factor 3B subunit 1 (Trinotate prediction...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..107 e-value: 3.4E-9 score: 38.5
IPR038737	Splicing factor 3B subunit 1-like	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 1..144
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig12762	contig	E-fasciculatus_F_contig12762:1203..2950 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig12762.2103.1	mRNA_E-fasciculatus_F_contig12762.2103.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig12762 1203..2971 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig12762.2103.1 ID=prot_E-fasciculatus_F_contig12762.2103.1|Name=mRNA_E-fasciculatus_F_contig12762.2103.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=144bp
MSKMKPPISELLPRLTPILKNRHEKVQENCIDLVGRIADRGPEHVSAREW
MRICFELLEMLKAHKKAIRRAAVNTFGYIAKAIGPQDVLHTLLNNLKVQE
RQNRVCTTVAIAIVAETCAPFTVVPALMNEFRVPELNVQNGVLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR038737	SF3b_su1-like
IPR011989	ARM-like