prot_E-fasciculatus_F_contig12757.2098.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12757.2098.1
Unique Nameprot_E-fasciculatus_F_contig12757.2098.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length678
Homology
BLAST of mRNA_E-fasciculatus_F_contig12757.2098.1 vs. uniprot
Match: A0A6H5KWS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS7_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 7.070e-144
Identity = 490/649 (75.50%), Postives = 496/649 (76.43%), Query Frame = 0
Query:   51 LDASSSSPGGRQVGELEGVAA----AGDLAELERAVVAASKITPPPADGAGAGAG-----DPTARMMGTGPASRSRRNSGANSIGGSWEQQEVAEAGPPGGILPAPPKTPSASSSAGSGMSVSSTGA---TQAVEALAHGSPAAAMTSPERRRRTGDGGAPAIHASPISRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRRELQPPQSINMTEGDEGPPSRPRKNSGGGG-PQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGLAPVVEGDAEEXXXXXXXXXXXEDDQDMVFKVVNKDAEEAVSDSRNPAEEEDVPFDVTPQNYRAGEAWHPERQKNAALASTSPLDLAGTELGRRGDSRETKKPHKSGXXXXXXREGGGVHFSLKKKFHIRGPRGMKGRDHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAVGWPKGAKGGEGAAASGGSDPTAFVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------AVPKSSPGSGEKGLTRQQMAAAKVAKRSQALRQGRGLMENSFL 678
            LDASS SP G+ V ELE V A    AG+LA LERAVVAASKIT                 D TARMMGTGPASRSRRNSG NSIGGSWEQQEVAE G                                 TQAVE L+HGSP AAMTSPERRRRT D  APA+HASPISRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRRELQPP SINMTEGDEGPPSRPRKNSGGGG PQFRGDG   RPSGERRERG  XXXXXXXXXXXXXXXNGLPRGRA GRNGRRGRRSVSMPQSG+RGPGAFGLAPVVEGDAEEXXXXXXXXXXXEDDQDMVFKVVNKDAEE VSDSRNPAEE+DVPFDVTPQNYRAGEAWHPERQ NAALASTSPLDLAGT L RRGDSR  KKPHK G      REGGGVHFSLK KFHIRG R MKGRDHKE    XXXXXXXX                           A AAVGW KGAKGGEGA               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A PK SPGSGEKGLTRQQMAAA VAKRSQALRQGRGLMENSFL
Sbjct:  251 LDASSPSPAGK-VTELEDVVAGHQAAGELAALERAVVAASKITXXXXXXXXXXXXXXXXXDFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAETGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAVEVLSHGSPTAAMTSPERRRRTRDF-APAMHASPISRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRELQPPHSINMTEGDEGPPSRPRKNSGGGGGPQFRGDGXXXRPSGERRERGXXXXXXXXXXXXXXXXXNGLPRGRAVGRNGRRGRRSVSMPQSGHRGPGAFGLAPVVEGDAEEXXXXXXXXXXXEDDQDMVFKVVNKDAEEPVSDSRNPAEEKDVPFDVTPQNYRAGEAWHPERQ-NAALASTSPLDLAGTGLDRRGDSRVNKKPHKFGGGNSSGREGGGVHFSLK-KFHIRGHRVMKGRDHKEDDGAXXXXXXXXSVTGFSGQAARGQDAGAAEATV-----AAAAVGWSKGAKGGEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGPKVSPGSGEKGLTRQQMAAAMVAKRSQALRQGRGLMENSFL 890          
BLAST of mRNA_E-fasciculatus_F_contig12757.2098.1 vs. uniprot
Match: D8LMN8_ECTSI (WD repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN8_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 5.250e-115
Identity = 310/394 (78.68%), Postives = 314/394 (79.70%), Query Frame = 0
Query:   62 QVGELEGVAA----AGDLAELERAVVAASKITPPPADGAGAGAGDPTARMMGTGPASRSRRNSGANSIGGSWEQQEVAE---AGPPGGILPAPPKTPSASSSAGSGMSVSSTGATQAVEALAHGSPAAAMTSPERRRRTGDGGAPAIHASPISRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRELQPPQSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGLAPVVEGDAEEXXXXXXXXXXXE---DDQDMVFKVVNKDAEEAVSDSRNPAEEEDVPFDVTPQNYRAGEAWHPERQKNAALASTSPLDL 445
            +V ELE VAA    AG+LA LERAVVAASKITP           D TARMMGTGPASRSRRNSG NSIGGSWEQQEVAE   AGPPGGILPAP                         EAL+HGSPAAAMTSPERRRRTGD  APAIHASPISRA XXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXX GRRELQPP SINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFG APVVEGDAEEXXXXXXXXXXX    DDQDMVFKVVNKDAEE VSDSRNPA+EEDVPFDVTPQ YRAGEAWHPERQ         PL L
Sbjct:  263 EVAELEAVAAGHQTAGELAALERAVVAASKITPXXXXXXXXXXXDFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAEVGQAGPPGGILPAPXXXXXXXXXXXXXXXXXXXXXXXXXEALSHGSPAAAMTSPERRRRTGDL-APAIHASPISRAAXXXXXXXXXXXXXXXXXXVSDQPRSSRAXXXXXXXXXXXXXXXXX-GRRELQPPHSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGHAPVVEGDAEEXXXXXXXXXXXXXXXDDQDMVFKVVNKDAEEPVSDSRNPADEEDVPFDVTPQTYRAGEAWHPERQSGDDGEEEDPLYL 654          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12757.2098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWS7_9PHAE7.070e-14475.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMN8_ECTSI5.250e-11578.68WD repeat protein (Partial) (Fragment) n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12757contigE-fasciculatus_F_contig12757:2..3817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12757.2098.1mRNA_E-fasciculatus_F_contig12757.2098.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12757 2..3819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12757.2098.1 ID=prot_E-fasciculatus_F_contig12757.2098.1|Name=mRNA_E-fasciculatus_F_contig12757.2098.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=678bp
SSSGGGGGGGGRSTSPTTATTTTQKSISRTGSNHRLRLSIEGDSRGGGGG
LDASSSSPGGRQVGELEGVAAAGDLAELERAVVAASKITPPPADGAGAGA
GDPTARMMGTGPASRSRRNSGANSIGGSWEQQEVAEAGPPGGILPAPPKT
PSASSSAGSGMSVSSTGATQAVEALAHGSPAAAMTSPERRRRTGDGGAPA
IHASPISRAAAAAARGGSGSSGGGGGSSGIVSDQPRSSRAIPAAVISTSS
GGSSRRGRRELQPPQSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRP
SGERRERGSRGAGGGRPRRSGRGGKNGLPRGRAAGRNGRRGRRSVSMPQS
GYRGPGAFGLAPVVEGDAEEEEEEEEEGDETEDDQDMVFKVVNKDAEEAV
SDSRNPAEEEDVPFDVTPQNYRAGEAWHPERQKNAALASTSPLDLAGTEL
GRRGDSRETKKPHKSGGGGGNSREGGGVHFSLKKKFHIRGPRGMKGRDHK
EDDGGGGGGSGGGGGGGGVTGFSGQAGRAQDAGAAEASVAAGAAVGWPKG
AKGGEGAAASGGSDPTAFVATAAAAPPVRRNSDSSHPEYGAAATAGKAVA
ARGSSPPSAPRRASTGEDSRDSSNRGGSPPPPAPPAVPKSSPGSGEKGLT
RQQMAAAKVAKRSQALRQGRGLMENSFL
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