prot_E-fasciculatus_F_contig12756.2097.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12756.2097.1
Unique Nameprot_E-fasciculatus_F_contig12756.2097.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length151
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12756.2097.1 vs. uniprot
Match: A0A6H5JI99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI99_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 7.480e-93
Identity = 140/150 (93.33%), Postives = 145/150 (96.67%), Query Frame = 0 
Query:    1 MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQTVGLVLIMSWVAFCALAIWTVRGGLSIVVLLHLGVVPIAVEVFESVLLFTSDSSTFITYVLAVLDLVIVAPALVLVPVYFRFLRDEERRRHAPL 150
            MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQ VGLVLI+SWVAFCALAIWTVRGGLSIV+LLHLG+ P+ VEVFESVLLFTS SSTFITYVLAVL+LVIVAPALVLVPVYFRFLRDEERRR APL
Sbjct:   84 MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAFENSTGQAVGLVLILSWVAFCALAIWTVRGGLSIVILLHLGITPLGVEVFESVLLFTSSSSTFITYVLAVLNLVIVAPALVLVPVYFRFLRDEERRRRAPL 233
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12756.2097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI99_9PHAE7.480e-9393.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..111
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12756contigE-fasciculatus_F_contig12756:74..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12756.2097.1mRNA_E-fasciculatus_F_contig12756.2097.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12756 64..1268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12756.2097.1 ID=prot_E-fasciculatus_F_contig12756.2097.1|Name=mRNA_E-fasciculatus_F_contig12756.2097.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=151bp
MVLWEGISTGSTEMISTALHRGIWAQTVVFLVTLIACWSASPGTRPDWAF
ENSTGQTVGLVLIMSWVAFCALAIWTVRGGLSIVVLLHLGVVPIAVEVFE
SVLLFTSDSSTFITYVLAVLDLVIVAPALVLVPVYFRFLRDEERRRHAPL
*
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