prot_E-fasciculatus_F_contig12754.2096.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12754.2096.1
Unique Nameprot_E-fasciculatus_F_contig12754.2096.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length70
Homology
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.660e-38
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG
Sbjct:  292 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 361          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: L1K3I3_GUITC (DNA topoisomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3I3_GUITC)

HSP 1 Score: 100 bits (249), Expect = 4.150e-23
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M EGRTQAPPLLSE+DLI LMD  GIGTDATIAEHI K+QQR YA+K++  +F PT+LG +LV  Y+ IG
Sbjct:  478 MTEGRTQAPPLLSEADLISLMDSHGIGTDATIAEHITKVQQRDYAIKSDSQQFSPTSLGKSLVTSYEAIG 547          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A158R560_9BILA (DNA topoisomerase n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A158R560_9BILA)

HSP 1 Score: 99.8 bits (247), Expect = 7.860e-23
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M +G TQ PPLL+E+DLIGLM++ GIGTDAT AEHI+KI++R+YA  N+++RF P  LGLALVDGYDN+G
Sbjct:  478 MKDGYTQPPPLLNEADLIGLMEKYGIGTDATHAEHIEKIKKRQYATLNKENRFLPGYLGLALVDGYDNMG 547          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A139APE3_GONPJ (DNA topoisomerase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139APE3_GONPJ)

HSP 1 Score: 99.0 bits (245), Expect = 1.470e-22
Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            +DE  TQ P LL+E+DLI LMD+ GIGTDATIA+HI+ IQ RKYAVK+   RF PTTLG AL++GYDN+G
Sbjct:  471 IDESSTQPPSLLTEADLITLMDKSGIGTDATIAQHIKTIQDRKYAVKDGNGRFSPTTLGFALIEGYDNMG 540          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A183UA66_TOXCA (DNA topoisomerase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UA66_TOXCA)

HSP 1 Score: 99.0 bits (245), Expect = 1.470e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M+EG TQ PPLLSE+DLI LMD+ GIGTDAT AEHI+ I+QR+YA  N + RF P  LGLALVDGYD +G
Sbjct:  736 MNEGHTQPPPLLSEADLIALMDKYGIGTDATHAEHIETIKQRRYAALNNEKRFVPGYLGLALVDGYDRMG 805          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A0B2W574_TOXCA (DNA topoisomerase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2W574_TOXCA)

HSP 1 Score: 99.0 bits (245), Expect = 1.480e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M+EG TQ PPLLSE+DLI LMD+ GIGTDAT AEHI+ I+QR+YA  N + RF P  LGLALVDGYD +G
Sbjct:  561 MNEGHTQPPPLLSEADLIALMDKYGIGTDATHAEHIETIKQRRYAALNNEKRFVPGYLGLALVDGYDRMG 630          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: F1L3P3_ASCSU (DNA topoisomerase n=1 Tax=Ascaris suum TaxID=6253 RepID=F1L3P3_ASCSU)

HSP 1 Score: 98.2 bits (243), Expect = 1.930e-22
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M EG TQ PPLLSE+DLI LMD+ GIGTDAT AEHI+ I+QR+YA  N + RF P  LGLALVDGYD +G
Sbjct:  167 MSEGHTQPPPLLSEADLIALMDKYGIGTDATHAEHIETIKQRRYAALNAEKRFVPGYLGLALVDGYDRMG 236          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A0N5A5K3_PARTI (DNA topoisomerase n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N5A5K3_PARTI)

HSP 1 Score: 98.2 bits (243), Expect = 2.730e-22
Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            M EG T APPLLSESDLI LMD+ GIGTDAT AEHI+ I++RKYA+ N+++RFYP+ +GLALV+ Y+++G
Sbjct:  494 MPEGTTTAPPLLSESDLISLMDKFGIGTDATHAEHIETIKKRKYAMLNKENRFYPSPIGLALVESYNHLG 563          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.090e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIG 70
            + EGRT+ PPLLSESDLI LMD   IGTDATIAEHI+KIQ+R YA +  + RF PT LGLALVDGY+ +G
Sbjct:  308 LTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALG 377          
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Match: A0A7S2B941_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B941_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.360e-21
Identity = 44/67 (65.67%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYD 67
            M EGRT  PPLL E+DLI LM++ GIGTDATIAEHI K+Q R Y  K+  +RF  T LGL LVDGYD
Sbjct:   35 MTEGRTAPPPLLHETDLIKLMERHGIGTDATIAEHIAKVQARSYVNKDASNRFRATPLGLVLVDGYD 101          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12754.2096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI3.660e-38100.00DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
L1K3I3_GUITC4.150e-2368.57DNA topoisomerase n=1 Tax=Guillardia theta (strain... [more]
A0A158R560_9BILA7.860e-2367.14DNA topoisomerase n=1 Tax=Syphacia muris TaxID=451... [more]
A0A139APE3_GONPJ1.470e-2267.14DNA topoisomerase n=1 Tax=Gonapodya prolifera (str... [more]
A0A183UA66_TOXCA1.470e-2268.57DNA topoisomerase n=1 Tax=Toxocara canis TaxID=626... [more]
A0A0B2W574_TOXCA1.480e-2268.57DNA topoisomerase n=1 Tax=Toxocara canis TaxID=626... [more]
F1L3P3_ASCSU1.930e-2268.57DNA topoisomerase n=1 Tax=Ascaris suum TaxID=6253 ... [more]
A0A0N5A5K3_PARTI2.730e-2265.71DNA topoisomerase n=1 Tax=Parastrongyloides tricho... [more]
A0A835YM61_9STRA5.090e-2268.57DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S2B941_9STRA2.360e-2165.67DNA topoisomerase (Fragment) n=1 Tax=Dictyocha spe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 2..70
e-value: 9.6E-28
score: 98.9
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 2..68
e-value: 1.3E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 1..70
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 1..70
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12754contigE-fasciculatus_F_contig12754:2632..3646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12754.2096.1mRNA_E-fasciculatus_F_contig12754.2096.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12754 2632..3649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12754.2096.1 ID=prot_E-fasciculatus_F_contig12754.2096.1|Name=mRNA_E-fasciculatus_F_contig12754.2096.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=70bp
MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQ
DRFYPTTLGLALVDGYDNIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023405Topo_IA_core_domain
IPR000380Topo_IA
IPR013497Topo_IA_cen
IPR013824Topo_IA_cen_sub1