mRNA_E-fasciculatus_F_contig12752.2095.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI) HSP 1 Score: 353 bits (905), Expect = 1.550e-120 Identity = 187/196 (95.41%), Postives = 189/196 (96.43%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQSPFKFQLRLGRAMMTEKF 588
P TL YAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLE LQACGFNAFDESLRPQSPFKFQLRLGRA++TEKF
Sbjct: 128 PETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAVITEKF 323
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA) HSP 1 Score: 142 bits (357), Expect = 9.230e-38 Identity = 93/187 (49.73%), Postives = 111/187 (59.36%), Query Frame = 1
Query: 28 YAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQSPFKFQLRLGRAMMTEKF 588
YAE+TASSLLYLSLE AGV HAAGH+GKA GICTLLR++ + VLP ++R+ L+ VL G + + EA ALA C + VA VAKGH+E +E LA+ L AF ALLPGVR AWYLEAL+ GFNAFD SL P+S FQ R+ RA MT KF
Sbjct: 164 YAEHTASSLLYLSLEAAGVADERAE------HAAGHIGKAVGICTLLRAVQ-----------HHSAQKLSVLPGQLLRKHLVASTVLFNGARTEAEAEALAACFYDVACVAKGHMEQGQE-LASG-------LSNDAFRALLPGVRAAWYLEALEKAGFNAFDASLTPRSWIPFQFRVARAAMTHKF 325
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.520e-24 Identity = 74/178 (41.57%), Postives = 96/178 (53.93%), Query Frame = 1
Query: 28 YAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQSPFKFQLRL 561
YAENTASSLLYL+LE VR HAA HVG+A GI T+LR+ +S +P ++ R F + + RGP+ + A AL++ F VA+ A H+E A E LA+ + G L ALLP VR YL+ALQ GFNA D+ L P+S +FQLRL
Sbjct: 146 YAENTASSLLYLTLEALHVRHPTAD------HAASHVGRATGIATVLRATKFH-----------AAHQSLYVPLEIQREFKVNVNDILRGPESPEAAQALSDMFFEVATQAHLHMEHAREMLASPPPSSSGPLSRNTITALLPAVRTTMYLKALQKNGFNALDQDLLPRSHLEFQLRL 306
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A8K1C5K0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5K0_PYTOL) HSP 1 Score: 81.6 bits (200), Expect = 5.080e-15 Identity = 71/196 (36.22%), Postives = 94/196 (47.96%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQSPFKFQLRLGRAMMTEKF 588
P TL YA+ TA+SLLYL+LE GVR GA AAGH G A G+ TLLR P L+ + LP D++ + L + E QD E LA VF VA +A H+ A+ E R+ +P A ALL V + YLE L+ FN FD SL +SP + L++ + K+
Sbjct: 145 PHTLHELEVYADKTAASLLYLTLECLGVRDGAAD------RAAGHAGVAVGLTTLLRGT-----PYHLAHNQL------YLPEDLLLKHDLTNEHFEAASQDPAEGKKLAPVVFEVACLALEHLRASRE---LTRD-----VPKEARPALLSVVSSSMYLEQLERVNFNVFDPSLMQRSPMQLHLQVLKNYFLRKY 315
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A2R6XSE0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XSE0_MARPO) HSP 1 Score: 79.3 bits (194), Expect = 2.760e-14 Identity = 62/175 (35.43%), Postives = 82/175 (46.86%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESL 525
P +++ RYAENTAS +LYL+LE AG+R+ A HAA H+GKAAGI LLR + G +P D+ + L + RG + ALA+ V VAS A H+ A +P GA LLP V L++L+ C FN FD L
Sbjct: 122 PVSMAEVERYAENTASVILYLTLEAAGIRS------TAADHAASHIGKAAGIGLLLRGTPVH-----------GSRRRTYIPIDIAAKHGLSQEDIYRG----QNREALADAVHEVASFANAHLVHARS--------LASTVPKGAVTVLLPAVPAGLLLQSLEKCNFNVFDSKL 267
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A1D1Y3N5_9ARAE (UPF0551 protein C8orf38, mitochondrial (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y3N5_9ARAE) HSP 1 Score: 78.2 bits (191), Expect = 1.470e-13 Identity = 68/186 (36.56%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 25 RYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDD--KEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQ----SPFKFQLRLG 564
+YAE+T S++LYL+L+ G+++ A HAA H+GKA+G+ LL+SL P A +GSI + LP+DV + L V E+G + + L++ VF VASVA H++ A E +PA AF LLP V L++L+ FN FD L SP FQL+L
Sbjct: 214 KYAEDTQSTMLYLTLQAGGIQS------TAADHAASHIGKASGLLLLLKSL----PYHANRTGSISY-----LPADVAEKHGL--LVKEQGRSEILLEPGERLSDAVFEVASVANLHLQKARE--------LANSVPAEAFPVLLPAVPAQVLLDSLRRTRFNVFDSRLSRGVLGISPLWFQLKLS 374
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A444D1P2_ENSVE (Uncharacterized protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444D1P2_ENSVE) HSP 1 Score: 77.4 bits (189), Expect = 1.780e-13 Identity = 68/191 (35.60%), Postives = 98/191 (51.31%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESL----RPQSPFKFQLRL 561
P T++ +YAE+T S++LY++L+ G+R+ A HAA H+GKA+G+ LL+SL P G I + +P+DV R L A R + AL++ VF VASVA H++ A E LA A +PA A LLP V L+ L+ FN FD + + SP +QL+L
Sbjct: 140 PETIADLEQYAEDTMSTMLYMTLQAGGIRS------TAADHAASHIGKASGLLLLLKSL----PYHVSRQGRISY-----IPADVASRHGLLIAAHGRSEIKMESGEALSDAVFEVASVASLHLQKARE-LAPA-------VPAEALPVLLPAVPAQVLLDTLRRRNFNVFDSRILGGVQGVSPLWYQLKL 307
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A0U9HJ73_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HJ73_KLENI) HSP 1 Score: 77.0 bits (188), Expect = 2.660e-13 Identity = 62/175 (35.43%), Postives = 82/175 (46.86%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESL 525
P TL+ YAE+TAS +LYL+LE AG++ HAA H+GKA+G+ LLR+ + LP DV + H V+E K + AL VF VA AK H+E A+ G LPA A LLP + V YL++LQ F+ F L
Sbjct: 156 PRTLADLESYAESTASGILYLTLEAAGIKN------TEADHAASHIGKASGLALLLRATPVH-----------SLKRRTYLPLDVTGK----HGVVEEDIYQRKSSDALNAAVFEVADAAKAHLEKAQS--------MRGSLPAEALPILLPAIPVGTYLDSLQRHNFDVFSPHL 301
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A835R452_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R452_VANPL) HSP 1 Score: 76.3 bits (186), Expect = 4.080e-13 Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 1
Query: 1 PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRF-LLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQ----SPFKFQLRL 561
P TLS +YAE+T S++LY++L+ G+++ A HAA H+GKA+G+ LL+SL P A +G I + +P +V ++ LL G + + + H LA+ VF VA+VA+ H++ + + LAA +PA A LLP V L++LQ FN FD SL SP +QL+L
Sbjct: 127 PGTLSDLEKYAEDTLSTILYMTLQAGGIQS------TAADHAASHIGKASGLLLLLKSL----PYHAARTGRIPY-----IPVEVAKKHGLLATQNGRAGIRMESDEH-LADAVFEVAAVARAHLQKSRD-LAAT-------VPAEAKPILLPAVPAQVLLDSLQKAHFNVFDSSLARGVLGVSPLWYQLKL 294
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Match: A0A2I0B863_9ASPA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B863_9ASPA) HSP 1 Score: 76.6 bits (187), Expect = 7.990e-13 Identity = 64/183 (34.97%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 25 RYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLEALQACGFNAFDESLRPQ----SPFKFQLRL 561
+YAE+T S++LY++L+ G+++ A HAA H+GKA+G+ LL+SL P +G I + +P+DV ++ L + R + ++E VF VASVA H++ A GLA+ +P AF LLP V L++LQ FN FD SL SP ++QL+L
Sbjct: 133 KYAEDTQSTILYMTLQAGGIQS------TAADHAASHIGKASGLLLLLKSL----PYHFGRTGKIPY-----IPADVAEKYGLLTTINGRSEIVIEFGEQISEAVFDVASVAGAHLQKAR-GLAST-------VPQEAFPVLLPAVSAQVLLDSLQRSHFNVFDSSLARGVLGISPLRYQLKL 292 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12752.2095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12752.2095.1 >prot_E-fasciculatus_F_contig12752.2095.1 ID=prot_E-fasciculatus_F_contig12752.2095.1|Name=mRNA_E-fasciculatus_F_contig12752.2095.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=197bp PCTLSTGGRYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAback to top mRNA from alignment at E-fasciculatus_F_contig12752:3123..3713- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12752.2095.1 ID=mRNA_E-fasciculatus_F_contig12752.2095.1|Name=mRNA_E-fasciculatus_F_contig12752.2095.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=591bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12752:3123..3713- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12752:3123..3713- >mRNA_E-fasciculatus_F_contig12752.2095.1 ID=mRNA_E-fasciculatus_F_contig12752.2095.1|Name=mRNA_E-fasciculatus_F_contig12752.2095.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1182bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12752:3123..3713- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |