mRNA_E-fasciculatus_F_contig12747.2088.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12747.2088.1 vs. uniprot
Match: A0A6H5JJY8_9PHAE (DUF2013 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY8_9PHAE) HSP 1 Score: 365 bits (938), Expect = 2.650e-111 Identity = 337/521 (64.68%), Postives = 354/521 (67.95%), Query Frame = 1
Query: 1 QISAIMSLGTTAEHDNPDANNGALPALSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEGGDVDGGITSAISTGPPNGVSXXXXXXXXXXDGKPQPRP---------SLSLDSLTEALGCAIDIAQVTDEEAGTESESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG--------------------TLADHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AALSNASRRVSRLRELLGSVGEVDAWTRLLSADGHLGCRRLADLAFAGHSAAAAAEPPA-----AEPQAATAA-APAPGVDTKQCRLLCSGALECLAICGKISPGMWADLARPGQNEDENAGGSSSNGSQLRPSPGGESSSRLTRLLSLCVVLSGSREGAAAAARTGLNEHEYFFGKGSGGRXXXXEEDGEEQEPDLPVVGLTLIYEILTGVCKGRVEGLRCWGGMPNLVESLLGLIANQDREEGSYMGATR 1452
+ISAIMSLGT A+++N D NG PALSAA ATEG VDGGITSA ST P GVS X SLSLDSLTEALGCAIDIAQ+TDEEAGTES+S XXXXXXXXXXXXXXXXXXX T ADH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAL+NASRRVSRLRELL SVGE DAW+RLLSADGHLGCRRLADLA AGHSAAA A PQAATA+ APAPGVDT++CRLLC+GALECLAI GKISPGMWADL++P Q+E+ GGESS RL RLLSLCV LSGS E AAAA+TGLNEHEYFFGKGSG XXXX QEPDLP VGLTLIYEILTGVCK RVE RCWGGM NLVESLLGLIANQDREEGSYMGATR
Sbjct: 561 EISAIMSLGTAAKNENRDPTNGTPPALSAAATKREGGGPAGGTGQDRRAS------------ATEGAGVDGGITSAASTAPRIGVSNDGGNDSGGXXXXXXXXXXXXXXXXXXSLSLDSLTEALGCAIDIAQITDEEAGTESDSSAGGRESDLASSPQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPADHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAALNNASRRVSRLRELLDSVGEADAWSRLLSADGHLGCRRLADLALAGHSAAAXXXXXXXXXXXAGPQAATASPAPAPGVDTRRCRLLCAGALECLAISGKISPGMWADLSKPDQSEEY----------------GGESS-RLARLLSLCVALSGSHEAVAAAAKTGLNEHEYFFGKGSGXXXXXXXXXXXXQEPDLPAVGLTLIYEILTGVCKDRVEAFRCWGGMSNLVESLLGLIANQDREEGSYMGATR 1052
BLAST of mRNA_E-fasciculatus_F_contig12747.2088.1 vs. uniprot
Match: D7G065_ECTSI (DUF2013 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G065_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.900e-99 Identity = 308/522 (59.00%), Postives = 324/522 (62.07%), Query Frame = 1
Query: 1 QISAIMSLGTTAEHDNPDANNGALPALSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEGG-DVDGGITSA--ISTGPPNGVSXXXXXXXXXX-------DGKPQPRPSLSLDSLTEALGCAIDIAQVTDEEAGTESESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------PGTLAD---HPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSNASRRVSRLRELLGSVGEVDAWTRLLSADGHLGCRRLADLAFAGHSAAAAAEPPAAEPQAATAAAPAP----GVDTKQCRLLCSGALECLAICGKISPGMWADLARPGQNEDENAGGSSSNGSQLRPSPGGESSSRLTRLLSLCVVLSGSREGAAAAARTGLNEHEYFFGKGSGGRXXXXEEDG-EEQEPDLPVVGLTLIYEILTGVCKGRVEGLRCWGGMPNLVESLLGLIANQDREEGSYMGATR 1452
+ISAIMSLGTTA++DN D GA PALSAA ATEGG DVDGGITSA ST PP GVS XX DGKPQPRPSLSLDSLTEALGCAIDIAQVTDEEAGTES+S XXXXXXXXXXXXXXX PGT AD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AALSNASRRVSRLRELLGSVGE DAW+RLLSADGHLGCRRLA LAFAG+SAA GVDT++CRLLC+GALECLAICGKISPGMWADL++P Q+E+ GGES+ RL RLLSLCV LSGS E A XXXX ED +E+EPDLP VGLTLIYEILTGVCKGRVE RCW GM NLVESLLGLIANQDREEGSYMGATR
Sbjct: 322 EISAIMSLGTTAKNDNRDPTIGAAPALSAAATTREGGGPAGRTGQDRRAS------------ATEGGADVDGGITSASAASTAPPVGVSNDGGNDSGXXXXXXXXXDGKPQPRPSLSLDSLTEALGCAIDIAQVTDEEAGTESDSSAGGRESDLASSPQASPPSVXXXXXXXXXXXXXXXXXXXXPTGVGGAGARGRKRTPGTPADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFFDADSLSDDPAAALSNASRRVSRLRELLGSVGEADAWSRLLSADGHLGCRRLAGLAFAGYSAAXXXXXXXXXXXXXXXXXXXXXXXXGVDTRRCRLLCAGALECLAICGKISPGMWADLSKPDQSEEN----------------GGESN-RLARLLSLCVALSGSHEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXEDERQEREPDLPAVGLTLIYEILTGVCKGRVEAFRCWSGMSNLVESLLGLIANQDREEGSYMGATR 814 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12747.2088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12747.2088.1 >prot_E-fasciculatus_F_contig12747.2088.1 ID=prot_E-fasciculatus_F_contig12747.2088.1|Name=mRNA_E-fasciculatus_F_contig12747.2088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=483bp MSLGTTAEHDNPDANNGALPALSAAAATREGGGGAGGTGQDRWQQQQQQQback to top mRNA from alignment at E-fasciculatus_F_contig12747:1734..3842- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12747.2088.1 ID=mRNA_E-fasciculatus_F_contig12747.2088.1|Name=mRNA_E-fasciculatus_F_contig12747.2088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2109bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12747:1734..3842- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12747:1734..3842- >mRNA_E-fasciculatus_F_contig12747.2088.1 ID=mRNA_E-fasciculatus_F_contig12747.2088.1|Name=mRNA_E-fasciculatus_F_contig12747.2088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2898bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12747:1734..3842- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |