prot_E-fasciculatus_F_contig12741.2086.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12741.2086.1
Unique Nameprot_E-fasciculatus_F_contig12741.2086.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length105
Homology
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: D7FZZ0_ECTSI (2'-phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ0_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.760e-57
Identity = 95/104 (91.35%), Postives = 97/104 (93.27%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRRRIQATASRNAAAGRSW 104
            MMPAQCKLIDAPVPPHFNSWANIKEVF+DVMYRAAR SQRRPRG K GGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRR+IQATA  N AAGR W
Sbjct:  425 MMPAQCKLIDAPVPPHFNSWANIKEVFRDVMYRAARQSQRRPRGGKVGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRRQIQATAPWNTAAGRRW 528          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A6H5L3C1_9PHAE (2'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.850e-54
Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRRRIQATASRNAAAGRSW 104
            MMPAQCKLIDAPVPPHFNSWANIKEVF+D MYRA R SQRRPRG K   MPAMLSALGLVLEGRHHSGLDDCRNIARIAI+LCRRSRR+IQATA RNAAAGR W
Sbjct:  467 MMPAQCKLIDAPVPPHFNSWANIKEVFRDEMYRANRQSQRRPRGGKLSDMPAMLSALGLVLEGRHHSGLDDCRNIARIAIQLCRRSRRQIQATAPRNAAAGRRW 570          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: UPI0013905D37 (ERI1 exoribonuclease 3 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013905D37)

HSP 1 Score: 82.0 bits (201), Expect = 4.110e-17
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRR 85
            M+P QCK ++ PVP +F  W NIK+V+ DVM + ++            GMP ML  LGL L GRHHSG+DD RNI +I + L R+
Sbjct:  123 MLPLQCKHLNIPVPTYFRKWINIKKVYSDVMGKQSKI-----------GMPGMLHGLGLELVGRHHSGIDDARNITKILVALARK 196          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A7S4QS23_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QS23_9DINO)

HSP 1 Score: 78.6 bits (192), Expect = 1.500e-16
Identity = 45/84 (53.57%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCR 84
            M+  QC+L    VP  F  W NIK  F+       R +Q R   + AG MPAML ALGL L+GRHH GLDDCRNIARI  EL R
Sbjct:   22 MISEQCQLSGQHVPARFRRWVNIKNAFR-------RLTQSR---SAAGSMPAMLGALGLELQGRHHCGLDDCRNIARILGELLR 95          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A1X7VTQ4_AMPQE (Exonuclease domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VTQ4_AMPQE)

HSP 1 Score: 80.5 bits (197), Expect = 1.710e-16
Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCR 84
            M+P QCK  D PVP +F SW NIK VF+            R  G KA GMP ML    + LEGRHHSG+DD RNIA+I   L R
Sbjct:  123 MLPGQCKYFDWPVPEYFRSWMNIKFVFQ------------RLTGVKAKGMPHMLEYFKIPLEGRHHSGIDDSRNIAKILTRLAR 194          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: UPI0018854AB9 (ERI1 exoribonuclease 3-like isoform X4 n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018854AB9)

HSP 1 Score: 79.7 bits (195), Expect = 2.620e-16
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRR 85
            M+P QC+L   P+PP   SW N+K +  DV            RG+   GM  ++  LGL L GRHHSG+DDCRNIARI   +CRR
Sbjct:  105 MLPNQCRLSGVPLPPFMRSWGNVKHLCADV------------RGSWPRGMDRLMKELGLPLIGRHHSGIDDCRNIARIVELMCRR 177          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: UPI001884C984 (ERI1 exoribonuclease 3-like isoform X1 n=3 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884C984)

HSP 1 Score: 79.7 bits (195), Expect = 6.680e-16
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRR 85
            M+P QC+L   P+PP   SW N+K +  DV            RG+   GM  ++  LGL L GRHHSG+DDCRNIARI   +CRR
Sbjct:  158 MLPNQCRLSGVPLPPFMRSWGNVKHLCADV------------RGSWPRGMDRLMKELGLPLIGRHHSGIDDCRNIARIVELMCRR 230          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A3M7R3B4_BRAPC (ERI1 exoribonuclease 3-like n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7R3B4_BRAPC)

HSP 1 Score: 77.0 bits (188), Expect = 7.870e-16
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRR 85
            M+P+QCK  +   P +F +W NIK+ F ++             G    GMP ML  L L LEGRHHSG+DDCRNIA+IA E+ +R
Sbjct:   58 MLPSQCKFFNIKYPNYFTTWINIKKSFAELT------------GHFPKGMPTMLQMLNLNLEGRHHSGIDDCRNIAKIAKEMAQR 130          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A814DNU0_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814DNU0_9BILA)

HSP 1 Score: 79.3 bits (194), Expect = 4.790e-15
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRR 85
            M+P+QCK  +   P +F  W NIK+ F D+       +   P+G     MP ML+AL L L+GRHHSG+DDCRNIA+IA E+  R
Sbjct: 1203 MLPSQCKYFNIEYPNYFKKWINIKKSFADL-------TSHFPKG-----MPVMLNALNLSLDGRHHSGIDDCRNIAKIAKEMANR 1275          
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Match: A0A7S3Y172_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y172_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 6.830e-15
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCR 84
            M+P+QC+L +  +P +   W NIK++F            +R    K+ GM  ML   GL LEGRHHSG+DDCRNIAR+ I+LC+
Sbjct:  184 MLPSQCRLTNTKIPSYLQEWVNIKDIFC-----------QRWNLDKSMGMVGMLRKSGLRLEGRHHSGIDDCRNIARLLIQLCK 256          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12741.2086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZZ0_ECTSI2.760e-5791.352'-phosphotransferase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L3C1_9PHAE1.850e-5488.462'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP ... [more]
UPI0013905D374.110e-1747.06ERI1 exoribonuclease 3 n=1 Tax=Nematostella vecten... [more]
A0A7S4QS23_9DINO1.500e-1653.57Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A1X7VTQ4_AMPQE1.710e-1651.19Exonuclease domain-containing protein n=1 Tax=Amph... [more]
UPI0018854AB92.620e-1647.06ERI1 exoribonuclease 3-like isoform X4 n=1 Tax=Pol... [more]
UPI001884C9846.680e-1647.06ERI1 exoribonuclease 3-like isoform X1 n=3 Tax=Pol... [more]
A0A3M7R3B4_BRAPC7.870e-1645.88ERI1 exoribonuclease 3-like n=1 Tax=Brachionus pli... [more]
A0A814DNU0_9BILA4.790e-1547.06Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A7S3Y172_HETAK6.830e-1545.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 10..78
e-value: 1.1E-4
score: 22.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..102
e-value: 5.0E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 1..86
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12741contigE-fasciculatus_F_contig12741:1157..2464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12741.2086.1mRNA_E-fasciculatus_F_contig12741.2086.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12741 562..3706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12741.2086.1 ID=prot_E-fasciculatus_F_contig12741.2086.1|Name=mRNA_E-fasciculatus_F_contig12741.2086.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp
MMPAQCKLIDAPVPPHFNSWANIKEVFKDVMYRAARHSQRRPRGAKAGGM
PAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRRRIQATASRNAAA
GRSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3