mRNA_E-fasciculatus_F_contig1274.2085.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1274.2085.1
Unique NamemRNA_E-fasciculatus_F_contig1274.2085.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A6H5L2H1_9PHAE (Acylphosphatase-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2H1_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.330e-89
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 2 
Query:    2 GPSRTAKSATACRGWSYASSSLRMGETAGEEGLAADGGSSDGTALAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDETSQNTAAAGVP 448
            GPSRTA  A+A RGW YASSSLRMGETAGEEGLAADGGSSDGTALAEARI+VQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDETSQNTAAAG P
Sbjct:   49 GPSRTAIPASASRGWCYASSSLRMGETAGEEGLAADGGSSDGTALAEARILVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDETSQNTAAAGAP 197
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A835YRR3_9STRA (Acylphosphatase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.130e-34
Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 2 
Query:  122 DGTALAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDETSQNTAA-----AGVP 448
            D  A+AEA+IVV GQ+ GGYFRAHARNEAH+ R+L GAL+E    +TEIIVEGK SAI SF+RWC++GPGLSQQI  V V ++E+TGIFDGF V PD +    AA     AG+P
Sbjct:   56 DAGAMAEAKIVVSGQAYGGYFRAHARNEAHYMRRLSGALQEYPD-RTEIIVEGKRSAIDSFVRWCRKGPGLSQQISTVEVTFSEHTGIFDGFRVIPDPSKAGPAAPVTKSAGLP 168
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A6V2T9H1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T9H1_HETAK)

HSP 1 Score: 115 bits (288), Expect = 4.610e-26
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 2 
Query:  116 SSDGTALAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDE 415
            S DG  + +A+I V GQ  GG++RA A+ EA F+R+L G +++L  G  EI+VEG    + SF+ WCKRGPGL+Q I +V V+W+  TGIFD FE FPD+
Sbjct:  101 SDDGKEVVQAKITVSGQVQGGFYRAMAKKEASFHRRLVGGIRDLRCGSVEIVVEGPRKKLESFIGWCKRGPGLTQAISQVEVEWSPSTGIFDSFETFPDQ 200
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A7S2XVC5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC5_9STRA)

HSP 1 Score: 110 bits (276), Expect = 6.130e-25
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 2 
Query:  134 LAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEVFPDE 415
            + +A+I+++GQ  GGYFRA  +NEA   R L GAL+EL  G T+++VEG    I SFL+WCKRGPGL+Q + +V V+W + TGIFD FEVF ++
Sbjct:   64 IMQAKILLKGQVQGGYFRAQCKNEAFRFRGLLGALRELPDGSTKVVVEGPEQKILSFLKWCKRGPGLTQIVDDVQVEWLDSTGIFDTFEVFTND 157
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A7R9UAZ5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAZ5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.680e-18
Identity = 45/104 (43.27%), Postives = 73/104 (70.19%), Query Frame = 2 
Query:  122 DGTALAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGP-GLSQQIQEVTVDWAEYTGIFDGFEVFP--DETSQ 424
            D  A  +A++++ G ++GGYFRA  RNEA F+R L G LKEL  G++EI++EG+  +I +FLR+C++   GLSQ+I   ++++ + TG F  F+V+   D+TS+
Sbjct:    7 DTAAKTQAKVLLSGDASGGYFRACMRNEAKFHRSLKGYLKELELGKSEIVLEGRRGSIDAFLRYCRKNALGLSQRIVIDSIEYTDVTGEFSDFDVYALEDDTSE 110
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A7S1TW81_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW81_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.450e-16
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:   98 LAADGGSSDGTALAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGP-GLSQQIQEVTVDWAEYTGIFDGFEV 403
            L  +G   D  A   A+I + G ++GGYFRA  RNEA FNR L G L E G+G +EI+VEG+  ++ +FLR+CK+   GLSQ+I+  +V++ + TG F  F+V
Sbjct:   90 LRCEGAPKDPKAEVRAKIQLTGDASGGYFRACFRNEAKFNRFLKGYLTEQGEGNSEIVVEGRQRSVDAFLRFCKKDAIGLSQRIEVASVEFEDATGEFSDFDV 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A661SIQ6_9DELT (Acylphosphatase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661SIQ6_9DELT)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-12
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 2 
Query:  143 ARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEV 403
            A  +++G+  G  FR   R  A   R + G ++ L  G+ E + EGK S ++S L+WC+ GP L+  +++VTVDW +YTG FD FE+
Sbjct:    6 AHALIEGRVQGVCFRMDTRRAA-LERNVMGWVRNLPDGRVEALFEGKESDVKSMLKWCESGPVLAS-VRKVTVDWRDYTGKFDSFEI 90
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A3M1D161_9DELT (Acylphosphatase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1D161_9DELT)

HSP 1 Score: 73.2 bits (178), Expect = 2.350e-12
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 2 
Query:  149 IVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEV 403
            + ++G+  G ++RA AR+EA     L G +K L  G+ E++ EG    +   L WC++GP  ++ + +VTV+W EY+G +DGFEV
Sbjct:    9 LYIEGRVQGVFYRASARDEAR-RLGLSGWVKNLPDGRVELLAEGPRDRLEQLLAWCRQGPPAAR-VDDVTVEWGEYSGSYDGFEV 91
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A497FU72_9CREN (Acylphosphatase n=2 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A497FU72_9CREN)

HSP 1 Score: 63.5 bits (153), Expect = 5.860e-9
Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 2 
Query:  134 LAEARIVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEV 403
            +  A + + G   G +FRA+ R  A     + G +K L  G+ E ++EG   A++  ++W  RGP L++ + +V V+W EY G FD FEV
Sbjct:    4 MVRAHLFISGIVQGVFFRANMRRVARMYG-VKGWVKNLPDGRVEAVLEGPEDAVKKVIKWAHRGPPLAR-VDKVDVEWEEYRGEFDDFEV 91
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Match: A0A842W3N0_9ARCH (Acylphosphatase n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A842W3N0_9ARCH)

HSP 1 Score: 61.6 bits (148), Expect = 2.640e-8
Identity = 26/85 (30.59%), Postives = 50/85 (58.82%), Query Frame = 2 
Query:  149 IVVQGQSTGGYFRAHARNEAHFNRKLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWAEYTGIFDGFEV 403
            ++++G+  G +FRA+ +  A     L G +K L  G  E++ EG+   I+ F+ +C++GP  S ++ ++ + W +YTG F  F +
Sbjct:    8 LIIKGRVQGVFFRANTQKHAE-KLNLEGWVKNLPDGNVEVVAEGEKEKIKDFISFCRKGPS-SARVDDIDIRWEDYTGEFKSFSI 90
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1274.2085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L2H1_9PHAE1.330e-8995.30Acylphosphatase-like domain-containing protein n=2... [more]
A0A835YRR3_9STRA1.130e-3462.28Acylphosphatase-like domain-containing protein n=1... [more]
A0A6V2T9H1_HETAK4.610e-2651.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XVC5_9STRA6.130e-2553.19Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7R9UAZ5_9STRA5.680e-1843.27Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TW81_9STRA1.450e-1645.63Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A661SIQ6_9DELT1.720e-1240.23Acylphosphatase n=2 Tax=Deltaproteobacteria bacter... [more]
A0A3M1D161_9DELT2.350e-1238.82Acylphosphatase n=1 Tax=Deltaproteobacteria bacter... [more]
A0A497FU72_9CREN5.860e-935.56Acylphosphatase n=2 Tax=Thermoprotei archaeon TaxI... [more]
A0A842W3N0_9ARCH2.640e-830.59Acylphosphatase n=1 Tax=Candidatus Woesearchaeota ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1274contigE-fasciculatus_F_contig1274:16087..18816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.2
Seed ortholog evalue3.2e-65
Seed eggNOG ortholog2880.D8LR73
EggNOG free text desc.Acylphosphatase
EggNOG OGs2C3YV@1,2SES2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcylphosphatase-like domain
Ec32 orthologEc-06_004110.1
Exons4
Model size1571
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1274.2085.1prot_E-fasciculatus_F_contig1274.2085.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1274 17207..18746 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927781.3838575-UTR-E-fasciculatus_F_contig1274:16086..172061622927781.3838575-UTR-E-fasciculatus_F_contig1274:16086..17206Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1274 16087..17206 -
1695995691.3645022-UTR-E-fasciculatus_F_contig1274:16086..172061695995691.3645022-UTR-E-fasciculatus_F_contig1274:16086..17206Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1274 16087..17206 -
1622927781.4794729-UTR-E-fasciculatus_F_contig1274:18746..188161622927781.4794729-UTR-E-fasciculatus_F_contig1274:18746..18816Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1274 18747..18816 -
1695995691.419696-UTR-E-fasciculatus_F_contig1274:18746..188161695995691.419696-UTR-E-fasciculatus_F_contig1274:18746..18816Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1274 18747..18816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927781.4033113-CDS-E-fasciculatus_F_contig1274:17206..172571622927781.4033113-CDS-E-fasciculatus_F_contig1274:17206..17257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 17207..17257 -
1695995691.378611-CDS-E-fasciculatus_F_contig1274:17206..172571695995691.378611-CDS-E-fasciculatus_F_contig1274:17206..17257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 17207..17257 -
1622927781.4207163-CDS-E-fasciculatus_F_contig1274:17461..175321622927781.4207163-CDS-E-fasciculatus_F_contig1274:17461..17532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 17462..17532 -
1695995691.3902109-CDS-E-fasciculatus_F_contig1274:17461..175321695995691.3902109-CDS-E-fasciculatus_F_contig1274:17461..17532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 17462..17532 -
1622927781.439787-CDS-E-fasciculatus_F_contig1274:18071..182341622927781.439787-CDS-E-fasciculatus_F_contig1274:18071..18234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 18072..18234 -
1695995691.3996887-CDS-E-fasciculatus_F_contig1274:18071..182341695995691.3996887-CDS-E-fasciculatus_F_contig1274:18071..18234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 18072..18234 -
1622927781.4636915-CDS-E-fasciculatus_F_contig1274:18650..187461622927781.4636915-CDS-E-fasciculatus_F_contig1274:18650..18746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 18651..18746 -
1695995691.4094841-CDS-E-fasciculatus_F_contig1274:18650..187461695995691.4094841-CDS-E-fasciculatus_F_contig1274:18650..18746Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1274 18651..18746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1274.2085.1

>prot_E-fasciculatus_F_contig1274.2085.1 ID=prot_E-fasciculatus_F_contig1274.2085.1|Name=mRNA_E-fasciculatus_F_contig1274.2085.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=127bp
MGETAGEEGLAADGGSSDGTALAEARIVVQGQSTGGYFRAHARNEAHFNR
KLCGALKELGQGQTEIIVEGKTSAIRSFLRWCKRGPGLSQQIQEVTVDWA
EYTGIFDGFEVFPDETSQNTAAAGVP*
back to top

mRNA from alignment at E-fasciculatus_F_contig1274:16087..18816-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1274.2085.1 ID=mRNA_E-fasciculatus_F_contig1274.2085.1|Name=mRNA_E-fasciculatus_F_contig1274.2085.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2730bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1274:16087..18816- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGCCCGTCTCGAACAGCGAAGTCAGCAACTGCCTGCAGGGGTTGGTCCT
ATGCATCAAGCAGCTTGCGGATGGGTGAAACAGCTGGAGAGGAGGGCTTG
GCGGCGGATGGCGGAAGCAGCGATGGAACAGCTCTCGCCGAGGCTCGAAT
AGTTGTTCAGGGGCAGGTGGGTTAAGTGCCGGGAGATGTTTACCTATTTT
TTTCTCTTTTTCCTGATTGGTGTTGTATTGTCTAGTGAAACGAGTCTTGA
GCAACTTGGTAGATATGACACCAGCCAGGCTTCTACAACGAACGTCGCAT
TTGAATATTGGTATGCCATTGCACAGTTTCGACGCTACTGTTCATAACTG
CCTTCGCCATCTCTGTGTTTTGTATACAGAGAGGACGTAAACCCACACCG
ACGCACTTCGTCGTTAGGCTTTTCTGGGCGTCGAGTCCTTGAATATCGTA
TTTCCGGCCCAGGCCATCCTCCCGTTCAGTCGCTGCCCGCTTCTGCCCCC
CATCCCCACCCCGTTGCCACTCGCGCCTTGCGTCTCCGCTTTTGCCAACC
CAAACAACTGCTTGGATTACGGAATATGGCAGTCTACCGGCGGATACTTC
CGAGCGCACGCCAGGAACGAGGCCCATTTCAACCGCAAGCTGTGCGGGGC
CCTGAAAGAGCTTGGGCAAGGGCAGACGGAGATCATCGTCGAAGGGAAGA
CTAGCGCTATCCGGAGCTTCCTGCGGTGGTGTAAGAGGGGCCCCGGTAAG
TGTAGCGTGGGCGAAGTCGCTGAGTGCATGCGTTTCGGAGACCTCGGGGG
AATGGGAAGGAACTATTTTTCCGATTCACCGTAGTCCCGGCGAGTCGACC
GGTGTGCAGACCGGTGTACCGGAGGCCATGGCGGACGGGAAAGACGTGGT
GGGCGTGCGGGAATCAGGGTTAGGCAAACGGCCGAAATGAACGGAGAAGG
GAAGGAAGCCTCTTCCTGTTGTTGTCCGTTGAAACCTTTTCTTCAGACGC
ATTTTTCGTCTAGTCCAGCGCCCTCTCATGGTGCGTTTGTTTCTCTTCGT
CCCTCGTTAAGCTTTTGCGACGGGACGGCACTCATACGCATACCTGGGGT
GACCGTACCATCAGATGGGAAAACGCACGAGGATGGAGAGACGGACGGGC
GAGCCCCCATTCCTGGACAATTTCTGACTCCCGTCTGTTTTTTGTTTCTC
GTTTTTTTCGTGCTTCCGGCCATGCCCACATGCGTCCTCTGATGGCTACT
CCCTTTGACCCTTGAATTTCGTCGTCGCGCCCAGGCTTGTCTCAACAGAT
TCAGGAAGTGACGGTGGACTGGGCCGAGTACACGGGAATTTTCGACGGCT
TCGAGGTGTGTGCCCGAAAGTGTTTCTTTTGGTACTGTCGGCTGGGAGAC
GATGAGAGTGTAGCTCGAAGCAGCCATCCCCGTCCGCGGTAGTTGGATCG
AAAACACGTGCCCGTGGGTCTGGTGCAGTCAACCTCACTCTGTCACGCGA
TTAATTCTGTTTGCGTACATATCCAGTGATAATTAATCGTTTGCTCCTCG
AACGCGCAGGTGTTCCCCGACGAGACTTCCCAGAACACAGCAGCCGCAGG
GGTCCCGTGATGCGGATGAAGGTGTCCCCCCTCTTGCCCCCTCATCGTGG
TTCAGTCCAGGAAATCCAGAGACGGGGAACGAGAGAAAGCGCGGAAATAG
AGCGCTAGCGCCTGGTCCAGAGAGATGGATGGGGCGTTACATCATCCTTT
TGTCTTTGGCGTGACGGTCTGATTTGGTACTGGACACCATTTAGGCCACA
TCGATAATATAGTTTACCACACCGGTGTCGTTGTTTTTGTGCCCCCTGGT
TGCCACGCGGCAGGCGAAGTGGCGATTTATTTAGCGACGGATGAGAGTGA
GCGATCGACAGTAGCTTGATTTCAACTTGAAGGCATTGACTCTCGGGCTG
TAGGGAGTACGCGTCGAGGCGTCTTTGTAGCATGCGAAAGAAGGCGCAGT
AACCACGTCGAGCGCTGAATGCTAGTGATAATTTACGCACGCACGCAATG
AGAGATTTTTGTCCACGTAGCAGTTGTTTACGCCAACGGGTCGGTCTTCC
TCTTGCCGGGCGGGAATGGTGATCTTTTTTGGCTGATTTGTGCTCACGTG
GAATCGGAAGCGAACCTGCTTCCCGGCGGAGGGATAAAGGCATACCCGAC
ACAGTCGCGGCAGGACTACAATTGACATTTAGCGTTGTCTGTTTTTTTTT
CTTCCTACGTCTGCCTTCAGCCGGCAAGGGGCCGTGTTCTCGACTGGCGG
CTAGTCCACCTGTGCAGTAAATGGGGTGCGTCATTTTGCCGTGGGGGTGG
TCGCAAAGTTCTTGCCGGTGGTACTCAAATACCATGTCCTTTGCGGAACG
TATCAGCTCCCCCGTATTATTAGCATGCGTACCATGGCTGTGGTTGTGGC
TCCGTGCCTAACAATACCCCCACCTTGTTCCCTTTGGCTTTTTCCAGAGG
GTCTTGACAGGTTGTGGACATTGGATGTGTGGACAAAGACATGTGAGACA
AGCATACTCTCCTCCCCCCGCCTGTGCGCGAAACATGACGGAATTTCGAC
AAGCTTCCGCGAAAGACTTCCGACACGTAATTTAGCGCAAGACATGCTGC
GAGTACCAGCTGGCGTAGATTTTTCGGCGGCGTTAGATGGCATTCAACCG
TTCATGGGGGGGTGTCCGTCGTGTGAAAAC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1274:16087..18816-

>mRNA_E-fasciculatus_F_contig1274.2085.1 ID=mRNA_E-fasciculatus_F_contig1274.2085.1|Name=mRNA_E-fasciculatus_F_contig1274.2085.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1274:16087..18816- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGTGAAACAGCTGGAGAGGAGGGCTTGGCGGCGGATGGCGGAAGCAG
CGATGGAACAGCTCTCGCCGAGGCTCGAATAGTTGTTCAGGGGCAGATGG
GTGAAACAGCTGGAGAGGAGGGCTTGGCGGCGGATGGCGGAAGCAGCGAT
GGAACAGCTCTCGCCGAGGCTCGAATAGTTGTTCAGGGGCAGTCTACCGG
CGGATACTTCCGAGCGCACGCCAGGAACGAGGCCCATTTCAACCGCAAGC
TGTGCGGGGCCCTGAAAGAGCTTGGGCAAGGGCAGACGGAGATCATCGTC
GAAGGGAAGACTAGCGCTATCCGGAGCTTCCTGCGGTGGTGTAAGAGGGG
CCCCGTCTACCGGCGGATACTTCCGAGCGCACGCCAGGAACGAGGCCCAT
TTCAACCGCAAGCTGTGCGGGGCCCTGAAAGAGCTTGGGCAAGGGCAGAC
GGAGATCATCGTCGAAGGGAAGACTAGCGCTATCCGGAGCTTCCTGCGGT
GGTGTAAGAGGGGCCCCGGCTTGTCTCAACAGATTCAGGAAGTGACGGTG
GACTGGGCCGAGTACACGGGAATTTTCGACGGCTTCGAGGCTTGTCTCAA
CAGATTCAGGAAGTGACGGTGGACTGGGCCGAGTACACGGGAATTTTCGA
CGGCTTCGAGGTGTTCCCCGACGAGACTTCCCAGAACACAGCAGCCGCAG
GGGTCCCGTGAGTGTTCCCCGACGAGACTTCCCAGAACACAGCAGCCGCA
GGGGTCCCGTGA
back to top