prot_E-fasciculatus_F_contig12728.2077.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12728.2077.1
Unique Nameprot_E-fasciculatus_F_contig12728.2077.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length132
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12728.2077.1 vs. uniprot
Match: D7FU61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU61_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.760e-30
Identity = 78/141 (55.32%), Postives = 91/141 (64.54%), Query Frame = 0 
Query:    1 MAARALKVALAA-----PLLLPQGGGGYMLPRQDF-------FSPANYGGVDSPLGLGGKVAPAVLEAAGSLAAXXXXXXXXXXXXXXSAQPTSADDVGLGSGETCDPEDAECKGDNTDEMTFSVLYWIRTLFVWFSVSRS 129
            M ARA +VA  A     PLLLPQ  GG+MLPRQ         FSPAN       L  G KVAP +L  AGSL                SAQPTSADDVGLG GETCDPEDA+C+GD+TDE+TFS+L+W+RTLFVW+SV+R+
Sbjct:    2 MVARAPEVAALAAPLLLPLLLPQEAGGFMLPRQFHHVRQDVSFSPANM-----LLRFGVKVAPVIL-MAGSLPVAASAATAGGSISS-SAQPTSADDVGLGPGETCDPEDADCQGDDTDEITFSMLHWVRTLFVWYSVART 135
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BLAST of mRNA_E-fasciculatus_F_contig12728.2077.1 vs. uniprot
Match: A0A6H5L143_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L143_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.980e-24
Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:   24 MLPRQDFF--SPANYGGVDSPLGLGGKVAPAVLEAAGSLAAXXXXXXXXXXXXXXSAQPTSADDVGLGSGETCDPEDAECKGDNTDEMTFSVLYWIRTLFVWFSVSRSVY 131
            MLPRQ        ++   +  L  G KVAP +L  AGSL                SAQPTSADDVGLGS ETCDPEDA+C+GD+TDE+TFS+LYW+RTLFVW+SV+R+ +
Sbjct:    1 MLPRQFHHVRQDVSFSSANMSLRFGVKVAPVIL-VAGSLPVAASSATAGDSISS-SAQPTSADDVGLGSDETCDPEDADCQGDDTDEITFSMLYWVRTLFVWYSVARAAF 108
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BLAST of mRNA_E-fasciculatus_F_contig12728.2077.1 vs. uniprot
Match: D7G955_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G955_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.360e-16
Identity = 66/140 (47.14%), Postives = 78/140 (55.71%), Query Frame = 0 
Query:    1 MAARALKVA-LAAPLLLPQGGGGYMLP-------RQDFFSPANYGGVDSPLG--LGGKVAPAVLEAAGSLAAXXXXXXXXXXXXXXSAQPTSADDVGLGSGETCDPEDAECKGDNTDEMTFSVLYWIRTLFVWFSVSRSV 130
            MAARA K A +A  LL  +G  GYM         +QDF +PA   GV+ PL   LG KVA   +  AGSL A               A  +SA+D GLGSGE C  EDAEC GD+ DEMTFSVL WI T F W  V+R++
Sbjct:    6 MAARAAKGAVIAVTLLQMKGADGYMPHHQQIHDVQQDFRNPAICRGVN-PLNQRLGSKVA---VPMAGSLQAASTI-----------AAGSSANDAGLGSGEACGSEDAECDGDDMDEMTFSVLCWICTFFFWCMVARTI 130
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BLAST of mRNA_E-fasciculatus_F_contig12728.2077.1 vs. uniprot
Match: A0A6H5KVM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM4_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.320e-15
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:   77 SAQPTSADDVGLGSGETCDPEDAECKGDNTDEMTFSVLYWIRTLFVWFSVSRSVYV 132
            SAQPTSA  V LGSGETCD EDAEC GD+TD+MTFSVL WI T FV F V+R++ V
Sbjct:   78 SAQPTSAYHVDLGSGETCDLEDAECHGDDTDKMTFSVLCWICTFFVSFMVARTIIV 133
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12728.2077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FU61_ECTSI1.760e-3055.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L143_9PHAE3.980e-2453.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G955_ECTSI2.360e-1647.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVM4_9PHAE5.320e-1571.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12728contigE-fasciculatus_F_contig12728:2327..3811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12728.2077.1mRNA_E-fasciculatus_F_contig12728.2077.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12728 2327..3811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12728.2077.1 ID=prot_E-fasciculatus_F_contig12728.2077.1|Name=mRNA_E-fasciculatus_F_contig12728.2077.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp
MAARALKVALAAPLLLPQGGGGYMLPRQDFFSPANYGGVDSPLGLGGKVA
PAVLEAAGSLAAAASATTAGSSITSSSAQPTSADDVGLGSGETCDPEDAE
CKGDNTDEMTFSVLYWIRTLFVWFSVSRSVYV
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