prot_E-fasciculatus_F_contig12727.2076.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12727.2076.1
Unique Nameprot_E-fasciculatus_F_contig12727.2076.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length294
Homology
BLAST of mRNA_E-fasciculatus_F_contig12727.2076.1 vs. uniprot
Match: D7FSH8_ECTSI (RHD3b, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH8_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 1.990e-177
Identity = 280/292 (95.89%), Postives = 284/292 (97.26%), Query Frame = 0
Query:    1 MMVAARPQRAAQTTPPLVSVSMLLLAATTGAGASTAASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDAMSDVQPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAAEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFK 292
            MMVAARPQRAAQTTP L+S+SMLL+    GAGAST ASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDA+SDVQPALEELL LYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPA EVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFK
Sbjct:    1 MMVAARPQRAAQTTP-LLSISMLLVVTVAGAGASTVASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDALSDVQPALEELLTLYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFK 291          
BLAST of mRNA_E-fasciculatus_F_contig12727.2076.1 vs. uniprot
Match: A0A6H5JWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB1_9PHAE)

HSP 1 Score: 516 bits (1329), Expect = 6.030e-175
Identity = 284/293 (96.93%), Postives = 289/293 (98.63%), Query Frame = 0
Query:    1 MMVAARPQRAAQTTPPLVSVSMLLLAATTGAGASTAASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDAMSDVQPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAAEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKV 293
            MMVAARPQRAAQTTP L+S+SMLL+AA  GAGASTAASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDA+SDVQPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVM+GAAGTPA EVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKV
Sbjct:    1 MMVAARPQRAAQTTP-LLSISMLLVAAVAGAGASTAASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDALSDVQPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMNGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKV 292          
BLAST of mRNA_E-fasciculatus_F_contig12727.2076.1 vs. uniprot
Match: A0A835ZAQ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.360e-35
Identity = 107/271 (39.48%), Postives = 147/271 (54.24%), Query Frame = 0
Query:   37 ASVMPMAFAGGDLVANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASN--------LALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRP-DA-MSDVQPALEELLALYEDGVVDPEQ-PKTFVVAVRDCEDGDEA---ELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAAEVARLLQQVSSYA-GPATESVGSNALTASFISSSAAVKCMASFK 292
            A+  P +  G  LV +LK  G  P+R VSC+G+QG+GK+TLMK+MFG             L LLEA SS +       V      A  +LA +D  +YNV + DL+R  DA ++++Q ALE  LA        PE  PK  V AVRD  DG+EA   ++E  + E LQ +W  AV+P  FA  +L DVLDV    LP HS A+ EY   A  L+  + +GA    AA+V + LQ   + A G   ES     L A+ ++ +AA + +A+FK
Sbjct:   17 AAAKPTSVLGTSLVESLKAAGATPLRVVSCIGSQGTGKTTLMKSMFGPAVEQETLIADDGLVLLEAESSCSLASRAKAVR----DAAAALAAADVAVYNVFMQDLQRSVDATLTELQMALEPFLAA---SAGQPEGGPKPLVFAVRDF-DGEEASQEQVEAAMTEALQRMWQRAVRPGDFAKKSLEDVLDVSFSFLPSHSLAAGEYAHAAAALRTRLAEGAKSATAADVLKTLQAAPAQATGAPVESTSPAELAAALVAKTAAAQALATFK 279          
BLAST of mRNA_E-fasciculatus_F_contig12727.2076.1 vs. uniprot
Match: A0A058Z096_FONAL (Protein SEY1 homolog n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z096_FONAL)

HSP 1 Score: 56.2 bits (134), Expect = 3.410e-5
Identity = 52/201 (25.87%), Postives = 85/201 (42.29%), Query Frame = 0
Query:   53 LKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQG-----------------------ASNLALLEARSSAAFVPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDAMSD--VQPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEY 228
            LK+ G      ++  GAQ +GKSTL+ T+FG G                       A N  +++   + +      ++E+    A+ SLA+S   + N+L  D+ R +A +   ++   E  L L++       Q    +  +RD      AEL K + E +  IW    KPEG   + LS   D+    LPH    + E+
Sbjct:   30 LKDAGHE-YNLIAIFGAQSTGKSTLLNTVFGTGFDVMTANRRQQTTKGLWMTTSGTAENTIVMDVEGTDSR-ERGEDLEMERKSALFSLAISQVLLINLLETDIGRSNASNYGLLRTVFEVNLGLFQSTSA---QKTLLLFVIRDHYGTPVAELSKTLEEDMNQIWEGIRKPEGLEDAKLSQYFDLAFTALPHKLIQAAEF 225          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12727.2076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSH8_ECTSI1.990e-17795.89RHD3b, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A6H5JWB1_9PHAE6.030e-17596.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAQ3_9STRA5.360e-3539.48Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A058Z096_FONAL3.410e-525.87Protein SEY1 homolog n=1 Tax=Fonticula alba TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 114..242
e-value: 1.6E-8
score: 33.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..45
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.567
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12727contigE-fasciculatus_F_contig12727:374..3109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12727.2076.1mRNA_E-fasciculatus_F_contig12727.2076.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12727 374..3109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12727.2076.1 ID=prot_E-fasciculatus_F_contig12727.2076.1|Name=mRNA_E-fasciculatus_F_contig12727.2076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=294bp
MMVAARPQRAAQTTPPLVSVSMLLLAATTGAGASTAASVMPMAFAGGDLV
ANLKEVGEAPVRTVSCVGAQGSGKSTLMKTMFGQGASNLALLEARSSAAF
VPETNEVEVGAGQAMVSLAVSDATIYNVLVHDLRRPDAMSDVQPALEELL
ALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPE
GFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAAE
VARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008803RHD3/Sey1