mRNA_E-fasciculatus_F_contig12724.2074.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A6H5LEF6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEF6_9PHAE) HSP 1 Score: 226 bits (575), Expect = 1.020e-72 Identity = 124/139 (89.21%), Postives = 126/139 (90.65%), Query Frame = 1
Query: 1 RAAQERAKSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQ------------IDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
+AAQERAKSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQ IDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDR IRQE+
Sbjct: 2 KAAQERAKSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQVFGSVETQYPKHIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRNIRQEI 140
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A7S2R5M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5M2_9STRA) HSP 1 Score: 148 bits (373), Expect = 9.710e-43 Identity = 79/125 (63.20%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 16 RAKSREEGWDSTRDNTR-IKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEVES 387
R ++RE GWD T T + +YNAL+DPNMRHFFE ++Q HL RTGQIDR+GRVID +K K KLHIIEQEFKQA R+E+WRQKEE +MR RVQ+KR ALERAR++E ++++ EDR IR+E+ S
Sbjct: 10 RLENRESGWDLTSCRTASLPDYNALYDPNMRHFFENQTIQRHLHRTGQIDRDGRVIDLEKNKAKLHIIEQEFKQANRLEFWRQKEEEEMRHRVQQKRHEALERARQQEKLIKMKEDRAIRREIVS 134
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A6T7GC98_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GC98_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.340e-39 Identity = 74/130 (56.92%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 1 RAAQERAKSREEGWDSTRDNTR-IKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEVES 387
RA + A++RE GWD + T + YNAL+DPNMRH+FE ++Q+HL +TGQID++GRVID ++ K KL+IIE+EFK+AE+ EYWRQKEE +MR RVQ+KR AL+RAR +E ++++ EDR+IRQE+ S
Sbjct: 6 RARTQAAQAREGGWDLSSCRTATMPSYNALYDPNMRHYFENTTIQSHLYKTGQIDKSGRVIDLERNKSKLNIIEREFKEAEKTEYWRQKEEEEMRYRVQQKRHAALDRARAQEKLMKMKEDRQIRQEIVS 135
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A7S4EDV9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDV9_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.250e-31 Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 67 IKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
+ Y+AL DPNMRH+FE SVQAHL +TGQID GRVID K K IIEQEFK AE++EYWR+KEE +MR RVQ KR AL RAR+ E + + EDR+IR E+
Sbjct: 23 LSSYDALRDPNMRHYFENRSVQAHLYKTGQIDAAGRVIDMSKNASKFAIIEQEFKAAEKLEYWRKKEEAEMRHRVQMKRHEALARARRAEKMAKAKEDRRIRAEI 127
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A7S3Y4U8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U8_HETAK) HSP 1 Score: 115 bits (289), Expect = 1.930e-29 Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 RAAQERAKSREEGWDSTRDNTR-----IKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
R Q+ K REEG++++ R + EYNAL D +MRH+FE P VQ HL RTGQIDR+GRVID K K KLHIIEQEF A+++E R +EE +MR RVQ+KR LE+AR ++ + ++ ED+ +R+E+
Sbjct: 5 RGRQDEIKRREEGFNTSFCTNRTSKSALTEYNALHDAHMRHYFENPVVQKHLYRTGQIDRSGRVIDLDKNKAKLHIIEQEFSAAQKLEETRLREEEEMRMRVQQKRFAVLEKARADDSLRKMKEDKALRKEI 136
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A1W0A9M5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9M5_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.830e-28 Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 22 KSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
K REEG+DS N ++ +YNAL D N+RHFFE +Q HL G ID+ GRVID +K K KL II+QEFK AE+ E +Q+EE ++R RVQ +R AL ARK+E +++L EDRK+ +++
Sbjct: 5 KRREEGFDSNVHNQKLPQYNALGDQNLRHFFENQRLQNHLQEVGLIDKTGRVIDPEKHKAKLSIIQQEFKLAEKSELLKQREEEEIRRRVQLRRHAALNEARKDEKIMKLKEDRKLTRQI 124
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A024TXZ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXZ8_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.660e-28 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 22 KSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKI 369
K RE+G+DS N ++ EYNAL D N+RHFFE +Q HL G ID+ GRVID +K KGKL I++QEFK AE+ E RQ+EE ++R RVQ +R AL ARKEE + ++ EDR +
Sbjct: 2 KRREQGFDSNTHNQKLPEYNALADHNLRHFFENRKLQHHLYDVGMIDKAGRVIDPEKHKGKLAILQQEFKHAEKAELLRQREEEEIRRRVQLRRHAALNEARKEEKIKKIKEDRML 117
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A835YVA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVA2_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.720e-27 Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 22 KSREEGWDST--RDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRAL----------------------------ALERARKEEMVLRLHEDRKIRQEV 381
++RE+ WD N R+ EYNAL+D NMRHFFE S Q+HLL+TGQID NGRV++ + +GKLHIIE EFKQAE E WR++EE D+R +VQ +R ALE+AR+EE+VLR DR +R EV
Sbjct: 376 RTREQSWDGRCCTSNERLPEYNALYDVNMRHFFENTSTQSHLLKTGQIDVNGRVVNLGRARGKLHIIEAEFKQAELCEVWREREEADVRAKVQLQRPTLSLTPLLNNQLQQVTSTRVLLPQAARLAALEQARREELVLRTKRDRSVRAEV 525
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A067C5F4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C5F4_SAPPC) HSP 1 Score: 107 bits (266), Expect = 6.170e-27 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 37 GWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
G+D+ N ++ EYNAL D N+RHFFE +Q+HL G ID+ GRVID K K KL II+QEFK AE+ E +Q+EE ++R RVQ +R AL ARKEE +++L EDRK+ +++
Sbjct: 2 GFDTNTHNQKLPEYNALADHNLRHFFENQKLQSHLHEVGLIDKTGRVIDPDKHKAKLSIIQQEFKLAEKAELAKQREEDEIRRRVQLRRHAALNEARKEEKIMKLKEDRKLTRQI 116
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Match: A0A485KAZ0_9STRA (Aste57867_1687 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAZ0_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.340e-26 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 22 KSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQIDRNGRVIDFQKQKGKLHIIEQEFKQAERIEYWRQKEERDMRERVQKKRALALERARKEEMVLRLHEDRKIRQEV 381
K RE+ +DS N + EYNAL D N+RHFFE +Q HL G ID+ GRVID +K KGKL I++QEFK AE+ E +Q+EE ++R RVQ +R AL ARK+E + ++ +DRK+ +++
Sbjct: 17 KRREQTFDSNTHNQTLPEYNALADGNLRHFFENRKLQQHLYDVGLIDKAGRVIDPEKHKGKLAILQQEFKHAEKAELLKQREEEEIRRRVQLRRHTALNEARKDEKIKKIKDDRKLTRQI 136 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12724.2074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12724.2074.1 >prot_E-fasciculatus_F_contig12724.2074.1 ID=prot_E-fasciculatus_F_contig12724.2074.1|Name=mRNA_E-fasciculatus_F_contig12724.2074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp RAAQERAKSREEGWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTback to top mRNA from alignment at E-fasciculatus_F_contig12724:2159..3839+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12724.2074.1 ID=mRNA_E-fasciculatus_F_contig12724.2074.1|Name=mRNA_E-fasciculatus_F_contig12724.2074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1681bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12724:2159..3839+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12724:2159..3839+ >mRNA_E-fasciculatus_F_contig12724.2074.1 ID=mRNA_E-fasciculatus_F_contig12724.2074.1|Name=mRNA_E-fasciculatus_F_contig12724.2074.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12724:2159..3839+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |