mRNA_E-fasciculatus_F_contig1272.2073.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1272.2073.1
Unique NamemRNA_E-fasciculatus_F_contig1272.2073.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: D7G0V2_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V2_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 1.490e-137
Identity = 192/202 (95.05%), Postives = 199/202 (98.51%), Query Frame = 1 
Query:   58 KKSPTNATAFDVTEPVSKTPNLTPVVRQEVMVDPPTSRELKYECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRGSL 663
            +KSPTNATAFDVTEP SKTPNLTPVVRQEVMVDPPTSRELKYECISE+PAYKGWRSILRR+IRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPG+NRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTW+ALMKDERTVAGAGKYSTQVF+SYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVR  +
Sbjct:   39 RKSPTNATAFDVTEPASKTPNLTPVVRQEVMVDPPTSRELKYECISESPAYKGWRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKDERTVAGAGKYSTQVFYSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRAMI 240
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.300e-47
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 1 
Query:  181 YECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEE 648
            ++ ++   AY GWR I+++ +R    K   +DV+ QE PSV VF W TQTNT T++KE+ PG   + +GVV G YE +KH S LQAA  ELEEEAHL  GTWH L +D+ T   A KYS+  F+ +LVVDP V  TP+ +DD EFIE  RGVS++E
Sbjct:   48 FKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQE 203
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH)

HSP 1 Score: 117 bits (294), Expect = 9.070e-30
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 1 
Query:  250 PQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVD--PVVKGTPRGLDDGEFIEYIRGVSLEEV 651
            P G+   YD+ITQ+H SV+VF WDT + TTT++KEY+PG N++M G V G  E +KHTS LQAA  ELEEEAHL    W++L+ +E  +    KYS   F  YL +D  PV    P  LDD E+I   R V+  E+
Sbjct:    3 PHGQKVDYDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLL-NEGAIMPFDKYSNNRFIPYLALDCEPVKSAKP--LDDEEYITIHRNVTYNEM 135
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.350e-29
Identity = 67/168 (39.88%), Postives = 93/168 (55.36%), Query Frame = 1 
Query:  178 KYECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHP-SVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEAD---KHTSALQAAACELEEEAHLHEGTWHALMKDER------TVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEV 651
            +YE + E   ++ WRSIL R +R P G +  YDV+ Q+   +V++F W++QT T T+++EY PG +R++YGV  G  E D    H    QAA  ELEEE HL  GTWH L           T     KY+      YLV+D      P+  DD E IE +R V+++EV
Sbjct:   97 EYELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEV 264
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A1E7ER69_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER69_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.070e-28
Identity = 63/161 (39.13%), Postives = 94/161 (58.39%), Query Frame = 1 
Query:  181 YECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQE--HPSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEA--DKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEV 651
            +E I E   Y GWR+I++RK+R    K+  +D++  +    +VL+F WDT++ T T+++EY P  NR+++G+  G  E   D H + L AA  ELEEE HL  G W  L+     +    KYST     YLV+DP  +  P+ LD+ E IE I GV++ E+
Sbjct:   48 FEIIDEKTVYSGWRTIVQRKVRMRNNKVVDFDLVGVKTGDSAVLIFAWDTKSKTATLIREYMPASNRILWGLAAGLVEEKHDNHNTEL-AARHELEEECHLKNGKWIPLLHQPTAM---DKYSTTTIQCYLVLDPEKEDNPKALDEEEDIEIIPGVTIPEI 204
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A7S1XDJ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDJ4_9RHOD)

HSP 1 Score: 114 bits (286), Expect = 1.120e-27
Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 1 
Query:  193 SETPAYKGWRSILRRKIRGPQGKIRSYDVITQEH--PSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKD-ERTVAG--AGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVR 654
            S+T  Y+G+RS+ +R++R P G+  ++D++ + H   SV VF +  ++ + T++KEY PG N ++YGV+ G  E  KHTS + AA  EL EEA+L  G    L +  + + AG    KYST  FH +L +D  +  +P   D  EFIE +RGVSL++VR
Sbjct:   65 SDTEVYRGYRSVFQRRVRYPSGESFTFDIVGRPHGDSSVFVFPFCRRSRSATLIKEYNPGGNGVLYGVIAGFVEMGKHTSIVDAARRELAEEANLIGGQLIPLQRQTDSSSAGYLKDKYSTDRFHMFLALDSELDPSPPQQDPEEFIEIVRGVSLDQVR 223
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A7S2ZFG6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 1.360e-25
Identity = 59/165 (35.76%), Postives = 95/165 (57.58%), Query Frame = 1 
Query:  178 KYECISETPAYKGWRSILRRKIRGPQGKIRSYDVI---TQEHPSVLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRGSL 663
            K+  + E  +++ ++++  R IR P GK  S+DV      +  SV VF +DT+T T T+L+EY PG+N +M+G   G ++  KH S   AA  EL EEA L  G++  ++  E       KYS  +FH +LV++PV    P   D+ E+I+ ++GV+L  ++  L
Sbjct:   39 KFSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGNPRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPML--ESGGVSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKIL 201
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A8H7UUU4_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7UUU4_9FUNG)

HSP 1 Score: 95.9 bits (237), Expect = 4.340e-21
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 1 
Query:  184 ECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHPS---VLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAG--KYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVR 654
            + +SE   +K + S+  R      G++  +DV+    P     +VFT+DT+T TT ILKEY  G N + Y  V G+Y+  KH S  QAA  EL EEA L  G W  L+  + T  G    K+    F  +L +DP+    P   D  E+IE +  V+++E++
Sbjct:   13 KVVSEEIQHKRYISVWNRTTEFDDGRVIQWDVVGHNTPYPTFCVVFTFDTKTKTTCILKEYAQGTNEIKYTCVAGSYDRKKHASITQAAQHELSEEALLTGGQWINLLPSDYTSDGISELKWGKNRFIPFLCLDPIKDKNPMARDAEEYIEVVHDVTMDELK 174
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A8H7PUL1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PUL1_MORIS)

HSP 1 Score: 95.5 bits (236), Expect = 8.690e-21
Identity = 55/151 (36.42%), Postives = 85/151 (56.29%), Query Frame = 1 
Query:  208 YKGWRSILRRKIRGPQGKIRSYDVITQEHPS---VLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAGAG-KYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEE 648
            +K + ++  R  R   G+  S+DV+    P    V VFT+DT T TT ILKEY  G N + Y    G+++  KHT  L+AA  EL EEAHL  G+W +L+   +    +  K+ T  F  Y+ ++PV+   P+  D  E++E +R V++E+
Sbjct:   19 HKRYITVWNRTTRFEDGREISWDVVGHSTPLPTFVTVFTFDTNTKTTCILKEYAQGTNEIKYCCTAGSFDRRKHTDPLEAAQHELSEEAHLKGGSWVSLLPTAQPNGISELKWGTNRFVPYICINPVLDENPKDRDAEEYMEIVRDVTIEQ 169
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Match: A0A163JK54_ABSGL (Uncharacterized protein n=2 Tax=Absidia TaxID=4828 RepID=A0A163JK54_ABSGL)

HSP 1 Score: 89.0 bits (219), Expect = 2.950e-18
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 1 
Query:  184 ECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHPS---VLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALM-KDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVR 654
            + + ET ++K + ++  R+ +   G+I  +DV+    P    V+VFT++T+T TT ILKEY  G N + Y  V G+ +  KH S L++A  EL EEA L  G W +L+ +D++      K+    F  YL ++P     PR  D+ E I+ +  V +++++
Sbjct:   15 KVLVETISHKRFITVWNRQTQFSDGRIIEWDVVGHHTPYPTFVVVFTYNTETKTTCILKEYAQGTNEIKYTCVSGSVDRRKHQSPLESAQHELSEEARLAGGEWISLLPEDQKDGISELKWGRNRFVPYLCINPHQDDQPRERDEEECIQVVDKVDIKDLK 175
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1272.2073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G0V2_ECTSI1.490e-13795.05Nudix hydrolase domain-containing protein n=2 Tax=... [more]
D7G6B3_ECTSI3.300e-4751.28Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A482S980_9ARCH9.070e-3048.53NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A7S1ZSI2_9STRA1.350e-2939.88Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7ER69_9STRA1.070e-2839.13Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S1XDJ4_9RHOD1.120e-2740.88Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZFG6_9RHOD1.360e-2535.76Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A8H7UUU4_9FUNG4.340e-2135.19Uncharacterized protein n=1 Tax=Mucor plumbeus Tax... [more]
A0A8H7PUL1_MORIS8.690e-2136.42Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A163JK54_ABSGL2.950e-1832.92Uncharacterized protein n=2 Tax=Absidia TaxID=4828... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1272contigE-fasciculatus_F_contig1272:12568..17886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue6.9e-108
Seed eggNOG ortholog2880.D7G0V2
EggNOG OGs2CFIT@1,2S4K6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-23_002190.1
Exons5
Model size663
Cds size663
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1272.2073.1prot_E-fasciculatus_F_contig1272.2073.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1272 12568..17886 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927779.776433-CDS-E-fasciculatus_F_contig1272:12567..126301622927779.776433-CDS-E-fasciculatus_F_contig1272:12567..12630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 12568..12630 +
1695995690.7286212-CDS-E-fasciculatus_F_contig1272:12567..126301695995690.7286212-CDS-E-fasciculatus_F_contig1272:12567..12630Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 12568..12630 +
1622927779.7872553-CDS-E-fasciculatus_F_contig1272:15150..152911622927779.7872553-CDS-E-fasciculatus_F_contig1272:15150..15291Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 15151..15291 +
1695995690.7402568-CDS-E-fasciculatus_F_contig1272:15150..152911695995690.7402568-CDS-E-fasciculatus_F_contig1272:15150..15291Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 15151..15291 +
1622927779.8028414-CDS-E-fasciculatus_F_contig1272:15927..160501622927779.8028414-CDS-E-fasciculatus_F_contig1272:15927..16050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 15928..16050 +
1695995690.7520905-CDS-E-fasciculatus_F_contig1272:15927..160501695995690.7520905-CDS-E-fasciculatus_F_contig1272:15927..16050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 15928..16050 +
1622927779.8155935-CDS-E-fasciculatus_F_contig1272:16623..167311622927779.8155935-CDS-E-fasciculatus_F_contig1272:16623..16731Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 16624..16731 +
1695995690.7619605-CDS-E-fasciculatus_F_contig1272:16623..167311695995690.7619605-CDS-E-fasciculatus_F_contig1272:16623..16731Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 16624..16731 +
1622927779.8283207-CDS-E-fasciculatus_F_contig1272:17658..178861622927779.8283207-CDS-E-fasciculatus_F_contig1272:17658..17886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 17659..17886 +
1695995690.772007-CDS-E-fasciculatus_F_contig1272:17658..178861695995690.772007-CDS-E-fasciculatus_F_contig1272:17658..17886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 17659..17886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1272.2073.1

>prot_E-fasciculatus_F_contig1272.2073.1 ID=prot_E-fasciculatus_F_contig1272.2073.1|Name=mRNA_E-fasciculatus_F_contig1272.2073.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=221bp
MRSSEKNKVGGGFAGLFRWKKSPTNATAFDVTEPVSKTPNLTPVVRQEVM
VDPPTSRELKYECISETPAYKGWRSILRRKIRGPQGKIRSYDVITQEHPS
VLVFTWDTQTNTTTILKEYYPGLNRLMYGVVGGNYEADKHTSALQAAACE
LEEEAHLHEGTWHALMKDERTVAGAGKYSTQVFHSYLVVDPVVKGTPRGL
DDGEFIEYIRGVSLEEVRGSL
back to top

mRNA from alignment at E-fasciculatus_F_contig1272:12568..17886+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1272.2073.1 ID=mRNA_E-fasciculatus_F_contig1272.2073.1|Name=mRNA_E-fasciculatus_F_contig1272.2073.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5319bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1272:12568..17886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCAGCAGCGAGAAGAACAAGGTTGGCGGCGGCTTTGCGGGGCTGTT
TCGGTGGAAAAAGGTGAGAAAACCAAGTTCGATCTCTGGGGCAGTGGTGT
GTGTGTGCGTGGCCTCAAATGGCCGTTACTTTTGCCTTTGCCGATGCAAC
ACAAGCAACAACAATACTGGATGGGAGCTCCGCATCTCGACGATGTGGAG
CACCGTTACTGCTGTCGGTGGAAAGCAAGCCCATGGTTCTTCGCCCGACG
TTCTTCGCGTTGGCACGAACCTAGGCTGTTCCCGACGTAGACACAGGTGG
AAAATACAAAAGCGAGCCAACCAGAGGCGTGTCGTCTTCTGTGTTTGGAA
ACAACTAGATGTGATGATGACAAGCCCCATCTTACGGAGCTACTTTCGGA
TCTTGGAGCCTGCGGCACGGGCTGGCTGGGCGGAGTTTTACGCACACCTC
TCCCCTACCAATCTTGGACAGGTGTCGCGTGCCCTAGTTGCAAGTACATC
GACTCGCCTCATCCCCTTGTGACGACAGGGTAGCCACTGCTCGATCCTTC
GCATATTTTCTGTGATGAAAGGGGAGAGGGGCGGCCAAAATGGTTGCTGT
TGACGCACATTTCTCGCCAGACCTCCGTTCACGTGCAATTACTGTCCGCG
GGTGTTTCATATGATATGAGAGGGAATCGATCGTACTGTAGTCTGCTGTA
CTGATTGCACCGCAAGATGTTCCTTGTTTACCTCAACTCCGCCAACGAAG
AAGATGTACTCCGTATGTACAGTAATTCCGTGAGTTAACACTGGTATCCT
GTTCGACATGTTCTACATGTGAATGGTACACATGGGTTCGACTGCATGTA
TGCACACTACATCTTGTACCACAGAACGAGCCTAACACAGAGAATCTACA
GAGAATACGCTGTTCCACAGATTTTTGTTCCACGAAGTTGGGTACGCGCC
CCCTCCTGAACGCCACCAGTTATTGTACCTACTGACAGTAGTGACTCGGT
GCTAAACGCGAAATATTCGGGGTTACAGGAATCGAAATTCGAAAAGAGGG
TGTAGAATCGGAAGGCCGAACTTCGTGATTGCGGGGGAAACGCCTGGTTT
GAGTTGTTGGTTGGGTTCCAACACTCTGTGTACCTCAGCACGGAGTATGA
GCCTCGAGCTGATGTCTGCGGTCATGTCCGCAGGCCAAGTATTGTTGTCT
CGAATGTGAAACCGCTTTTAAGTCGGAGGCACTTTCGCAGCTTGAAGAGT
TGGGTGTAGTACGGGGCTGCGTACGGCAAGCGACAACAGCAGTCCTATGT
TCAGCCGCACGAAATTGTCCTACTTGCCAAGCCTGCCTCCGCCCTGGCGG
CTAGAGAAGGACGAGAAGGCGACCGCCGTCGCGGGGGTGGTGCGTAAGGT
TGGGAGCTACGCTAACATTTTCCGTGGTCGTCGGTCGGCGGAACGGCTCT
ACATGTACATGTTTGTCGGTGCAGTTGTGAGCAAACATTTCTACAGAGCA
ACAGCACACGGATTGATGCTTGTCGCGGAGGTATCGTTCTTGAAATTCGG
AGCACCATTTCATGAACGGCAGGCAATTCAAACCAAGCGGACTTGCGGAG
AGGCCGCGGGCAAGAACTCCGTAGGGATAGTTATTTTTGGCGCTCAGTTT
GAAATTCTGGAAATATGCAAAAGATGAGGCGTTTCCCCGGTTTATTTCGG
GAGTTGCGCCCTCCCTGGGGAGGCCTAAATAAAATAGCTTTAGCTTTACC
CCGCCCCACACCGAAAAACCGAAACCCGTATGGTCGCCTTTGGGCTACCT
CACAGAGTAACCTCGACCCCAGCGTCCGGTACACAACGAGGTTTACGAGC
GCTTGCAAGTTATTTCGTGTGTTTCCTGCTGCCCGAAGCTAACCTCAACT
TGCCCAACAGCACTGGGGTAGATAGAGGTGGCCGTTCGACGGCTATCTAC
CTCTCGGGTGTCCAAGTTATCAATCACCCACTCTTTGTGGCACGCGTGCC
ACAAGCAACCGTTTTTATCGCCGCCCATGGGCAATGCTGTTCCTTTTTTC
GAGGTAAACTGTTCTAGAAACCGGAAAGTGTTTTTTGGCGCCCACCATCG
TTCTGCGGTTGGATTGCGGCATGTAATTCCTCTCCTTCTGTTCCAGGCAG
GCCTCTTTTGTTTTTTTGTTGTGAAAAATTGCCAGACTTTTTCGATATTT
CGCAAGCGTCATCATTAATAGTGCTTGGTGACAAGACCAGTTTCGCGTGA
TGGCCGCGTGCTACTTACTGACAGCTGTTGTTGTTGTTGTTGTTGTTGTT
GTTCTGATGTTGACATTCAAAACCGTCCCGACCTCTCCCCCTAGTACCTC
CATCTCTCCGTACCGATCTTACACTTGACGCGGTCGATTCCCGTGGCCAC
AGCTAACTCACCCTAAGGAAGGTAGAAAATCAAATGTAGAGGAAGGACCC
GAACGGTACCACCGATACTTGACATCCGCACCGTTGCCTTGCGCCCTCGC
TGAATTCCTTCCTTCCGTGCGGTGATTCCGTGCCCTTTCGCTTTTTTCCC
GCGTGGTGAACGCCACATTAAAAAAAAAATCAGAGCCCAACAAACGCTAC
GGCCTTCGACGTTACCGAGCCCGTGTCCAAGACTCCGAACCTGACTCCCG
TGGTCCGGCAAGAGGTCATGGTAGACCCGCCCACGTCTCGCGAGCTCAAG
TACGAATGCATCAGCGAAACACCGGTGAGTTGAACCACTCTCTTTTTTTT
GTTGTTTTTTTCCTCAACAGATATCGCTGATAGTGGTGGTTTCGGTTCTA
CAGCTACGTACGGTGTGTACCGGACGGCTGTGGCCGGGCTTTCGCAGAAA
CTATGCTCTTCGGAGGTGCTGCCTGCTCTTGTAGCCCCATGGTGTATGTG
AAGAACCTCACCCCTGAAGGGTTTGGCATGACCTGCCAGAGTGAAAGTAG
ACATGCTGCAGTGCTTCCCTCGTAGCATGGGCGAGTTGTCTGCTGCAATT
GTTGGTGAGGCCAGCGGCAGCGCCAGTCTCAGTTATCCTTGGATGGAACC
GCAGGCATTGCCAAGGTACCGGGTTGGTCGTGCATGGGCTTTTAGACGGT
ACAGCAGTACACATAGTTGAGGTAGACGGAGGCAACATTTGTTTCGGAGA
CGAATCCGAGACACAGGCGTGCACGGTTCCCGTGGAAGCACCTGACGGCA
GGTGTTTCGAGAACATGCTCAGCGTTCTTTGCCTCTGGAAGACTCTTTTG
ATTGAGGGGGTGCTGGCTCTCTGCCCCCCTCCTCCCCTGTTTGACTCGAG
ACGCAATCTTCATCGCCCTGCCCAAAAACAAAATCGCTCTGCGTTGGCCT
GTCGCTTCAGGCATACAAAGGGTGGAGGAGTATCCTCCGACGGAAAATCC
GGGGGCCGCAGGGCAAGATTCGATCGTATGACGTCATCACCCAGGAGCAC
CCGTCCGTTCTCGTCTTCACGTGGGATACCCAGGTGATTTTGGTGGTGTT
GGTAATGTTGATACATCGTTTACTCGACGACGGCACAGGTCATGGTCTCT
TCAGGCCAGCCTTTTTTTTTTTTTTTTTTTATTGTCTGCGCTGTTTGAAA
TGGTGGAAAACTTGCGCGTATTGTTGGTCGTGTGGCCGCATGAGAGGACA
TCACAAGCAGCTGGAGGGTGCACAGCGCGTTCTACAGCAGTTTTGGGCTT
GTGATGGGTCATGTGCTTCCTGCACAAGTAGACTTTTCGGCGAACCAAAT
ACGTCGAGGGCAAGGAGTCCTGACCGAGACGAGACTGCTCGAGTGTAACC
TCTATGCGCCGTGTGGTGCGCGACACTCATGCGACCGTTACCGCGGGCAA
TTCCCCCCCCCCGTGCAACCACAGCCGCTGATGGTTTGGTTTGTGTGCGG
ATACAGACAAAGTGGAAGCACCGCAACCACAAACCGCTGCTCATGTAGTT
CGAGTGCAGACAAACGCGCTCATGTATGTATCCATGTTTAGTCCTTGCTC
TGTCGTACTTGATGTTTGTTCTCCGATGCTGGTTGCTGTTTTCGTTTTCG
GCGCAGACCAACACGACGACGATACTGAAGGAGTACTACCCTGGATTGAA
CCGTCTCATGTATGGCGTCGTGGGCGGCAACTACGAGGCGGATAAGCACA
CGTCGGCGTTGCAGGTGATTGATTGGTTGATTATTTTGTGTGTTTGCGTG
GCTGATTGATTTCGTCGATGGTACGTGAGCTGTGGAGGAGAGGCAGTGCA
ACAACAGCAGCAGGAGGGGTTTGTAGATGGTGAATGCGTTTAGAGTAAAG
AGGCAATGCAAATATAGAAAGGCAATGCATCACGAATTGAGTCGCTGTAC
GTCGCGGCAGGGTGGAATGGTGGCTGCGGGTCCTCGTCCTCGTTTCTAGG
CAGTGCCGTGCCTGTCGCTGCAAAGACAGACTCACACCAGAAGCCCCTCC
GTTCAGACGGGATGATAATCGACGTTCCACCAGTGAAGGGAAGGGGGGCA
CGGAGATGGCTGGATGGGGGGGGGGCGGTGGACTGGAGGGATGCTATCCC
GGGGTCTGGCTACAAGCCAGGATCAGACCAGAAAAAACGCGGGTTGGTTG
TCAGGAATGGGGGTGATGAAGGAGGAAGCGCACCCCCTGGCACTGAACGT
TCTTCCCGCCTCACCCGCGGAGTCGCGGTTTGATCTGGAAGCTCACACCG
AGTAGCGGGACATTTTTCAGGGGTCCGTGTCGGAGGTCGGAGACGATTAT
TGCTGGTCCATGTTGGAGGGAATAGGGAGTGCAACGGTACATGCTGTACG
ATATCGAAACCTCTTGGGTGTTGGGTTGCGATATGTGTTCATCTTCCTCC
CGCGTCTTGCGTGCACGGCGGTATTGGTGCGATATTTTGCTCCCCCAGGG
GCATCGCGCACGCGTAGTGGTGTTCGGTAGTTTCCGGTCTCCCCTCTCTC
ACGTACGTACGCACGCATGTACAACGGAAGTATGTCTGTCTCTCACACGT
ACTTGGAAGTACTTACGTACGTGTCAAGTCTAATCGGGGTGATTATTTCC
ACGTCTCCTTCCACTGCTGTCGCCCCGGCACACGCATACAGGCCGCCGCC
TGCGAGCTGGAGGAGGAGGCACATCTCCACGAGGGCACCTGGCACGCCCT
CATGAAGGACGAGAGGACGGTGGCTGGGGCGGGCAAGTACTCGACGCAGG
TGTTCCACTCGTACCTTGTGGTCGACCCCGTGGTGAAGGGCACGCCGAGA
GGGCTGGACGACGGGGAGTTCATCGAGTACATCCGAGGCGTCTCGCTGGA
AGAGGTGCGAGGGAGCCTG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1272:12568..17886+

>mRNA_E-fasciculatus_F_contig1272.2073.1 ID=mRNA_E-fasciculatus_F_contig1272.2073.1|Name=mRNA_E-fasciculatus_F_contig1272.2073.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1272:12568..17886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCAGCAGCGAGAAGAACAAGGTTGGCGGCGGCTTTGCGGGGCTGTT
TCGGTGGAAAAAGATGCGCAGCAGCGAGAAGAACAAGGTTGGCGGCGGCT
TTGCGGGGCTGTTTCGGTGGAAAAAGAGCCCAACAAACGCTACGGCCTTC
GACGTTACCGAGCCCGTGTCCAAGACTCCGAACCTGACTCCCGTGGTCCG
GCAAGAGGTCATGGTAGACCCGCCCACGTCTCGCGAGCTCAAGTACGAAT
GCATCAGCGAAACACCGAGCCCAACAAACGCTACGGCCTTCGACGTTACC
GAGCCCGTGTCCAAGACTCCGAACCTGACTCCCGTGGTCCGGCAAGAGGT
CATGGTAGACCCGCCCACGTCTCGCGAGCTCAAGTACGAATGCATCAGCG
AAACACCGGCATACAAAGGGTGGAGGAGTATCCTCCGACGGAAAATCCGG
GGGCCGCAGGGCAAGATTCGATCGTATGACGTCATCACCCAGGAGCACCC
GTCCGTTCTCGTCTTCACGTGGGATACCCAGGCATACAAAGGGTGGAGGA
GTATCCTCCGACGGAAAATCCGGGGGCCGCAGGGCAAGATTCGATCGTAT
GACGTCATCACCCAGGAGCACCCGTCCGTTCTCGTCTTCACGTGGGATAC
CCAGACCAACACGACGACGATACTGAAGGAGTACTACCCTGGATTGAACC
GTCTCATGTATGGCGTCGTGGGCGGCAACTACGAGGCGGATAAGCACACG
TCGGCGTTGCAGACCAACACGACGACGATACTGAAGGAGTACTACCCTGG
ATTGAACCGTCTCATGTATGGCGTCGTGGGCGGCAACTACGAGGCGGATA
AGCACACGTCGGCGTTGCAGGCCGCCGCCTGCGAGCTGGAGGAGGAGGCA
CATCTCCACGAGGGCACCTGGCACGCCCTCATGAAGGACGAGAGGACGGT
GGCTGGGGCGGGCAAGTACTCGACGCAGGTGTTCCACTCGTACCTTGTGG
TCGACCCCGTGGTGAAGGGCACGCCGAGAGGGCTGGACGACGGGGAGTTC
ATCGAGTACATCCGAGGCGTCTCGCTGGAAGAGGTGCGAGGGAGCCTGGC
CGCCGCCTGCGAGCTGGAGGAGGAGGCACATCTCCACGAGGGCACCTGGC
ACGCCCTCATGAAGGACGAGAGGACGGTGGCTGGGGCGGGCAAGTACTCG
ACGCAGGTGTTCCACTCGTACCTTGTGGTCGACCCCGTGGTGAAGGGCAC
GCCGAGAGGGCTGGACGACGGGGAGTTCATCGAGTACATCCGAGGCGTCT
CGCTGGAAGAGGTGCGAGGGAGCCTG
back to top