mRNA_E-fasciculatus_F_contig1272.2071.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1272.2071.1
Unique NamemRNA_E-fasciculatus_F_contig1272.2071.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 3.340e-153
Identity = 260/366 (71.04%), Postives = 275/366 (75.14%), Query Frame = 1
Query:   10 GANRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGENLVKTTAKATVSSLPSPAPAAE---PSSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAGR 1098
            GANRPGLSGGH+G SQSSRNR+CLFPGC+ARP+YGLPGATRAVYCFSHKKGPMVQL KE PALP+N GKA +                                     VGTK  RAPSN DRN AKKARRG Q  E                   GG DER AISS+TV GENL KTTAK +  S PSPAPAAE   PSSP+NRLADSSGMAPSVEFL+LRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQW+SREK+AEDLR KAELRQQRKQYQAAGLKSGVVLEMFVP ATGTEAAGDGIEER GEVRG G ATT RG N  PGWQKVSPEVLSAPS+K+ GTGQR+ TS GR
Sbjct:   31 GANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKPRSQAPTEPAAAAAS--------------------VGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRS-SGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSN--PGWQKVSPEVLSAPSSKQHGTGQREETSVGR 373          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 5.990e-142
Identity = 255/369 (69.11%), Postives = 275/369 (74.53%), Query Frame = 1
Query:    1 LISGANRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGENLVKTTAKATVSSLPSPAPAAEPSSP---HNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAGR 1098
            ++  ANR G+SGGH+G SQSSRNRTCLFPGC+ARP+YGLPGATRA+YCF+HKK PMVQL KE PALPN AG A +         XXXXXXXX                    VG  KTRAPSN DRNGAKKARRG Q  E                   GG DER  ISSA VTGENL K T K + SSLP PAPA EP+ P   +NRLADSSGMAPSVEFL+LRQARE AKTEAEASGLGRRPRAPSRRALEAAGRLKG GAQW+SREK+AEDLR KAELR QRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIE+R GEVRG G ATTPRG N  PGW KVSPE LSAPS+K+ G+GQ KG+S GR
Sbjct:  265 VLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGNATTGKRSQGPAAXXXXXXXXS-------------------VGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSN--PGWHKVSPEALSAPSSKQHGSGQGKGSSVGR 612          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 3.740e-140
Identity = 265/368 (72.01%), Postives = 284/368 (77.17%), Query Frame = 1
Query:    1 LISGANRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGENLVKTTAKATVSSLPSPAPAAEP---SSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAG 1095
            ++  ANRPGLSGG++  SQSSR+  CLFPGC+ARP+YGLPGATRAVYCFSHKKGPMVQL KE PALP++AGKA +            XXXXXXXXXXXXXXXX          G KK RAP N DRNGAK ARRG Q  E                   GG DER AISS+TVTGENL KTTAK   SSLPSPAPAAEP   S P+NRLADSSGMAPSVEFL+LRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQW+SREK+AEDLR KAELR QRK+YQAAGLKSGVVLEMFVPAATGTEAAGDGIEER GEVRG G ATTP G N  PGWQKVSPE LSA S K+  TGQR+ +S G
Sbjct:  255 VLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXX---------XGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRS-SGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSN--PGWQKVSPETLSAASPKQHSTGQRRESSVG 610          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 8.800e-99
Identity = 209/361 (57.89%), Postives = 222/361 (61.50%), Query Frame = 1
Query:   25 GLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGENLVKTTAKATVSSLPSPAPAAE---PSSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAGR 1098
            G SG     S     RT    GC ARP+YGLPGATRAVYCFSHKKGPMVQL KEPP+LPN AG+AES+A                  XXXXXXXX         VG KKTRAPS+ DRNG+KKARRG Q  E                   GG DER AISSA VT ENL KTTAK +  SLPSPAPAAE   PSSP+NRLADSSGMAPSVEFL+LRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQW+SREK+AEDLR KAELRQQRKQY                                                     QKVSPE LSAP +K+ GTGQRK TS GR
Sbjct:   70 GSSGRSSSSSHPMPGRTSATRGCEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXS--------VGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRR-SGGKDERGAISSAQVTKENLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY-----------------------------------------------------QKVSPEALSAPYSKQHGTGQRKETSVGR 368          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.110e-55
Identity = 136/265 (51.32%), Postives = 165/265 (62.26%), Query Frame = 1
Query:  355 RAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXX--KGGNDERDAISSATVTGENLVKTTA-KATVSSLPSPAPAAEP---SSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAGRDRSL*SKPGPP 1131
            RAPSN D+ GA KA +G +  +                     GG D R  +S    T E+L  T + + TVSSL SP  AA     SSP NR  D++GMAPSVEF LLRQARE AK EA ASG GRRPRAPSRRALEA+G+LK  GAQW++RE++AE+ RFKAELR+QR+QY+AAGLKSGVVLE FV  A GT  AGDG+   V    G G+ATT  G +  P WQKVSP +L+A   +   T Q +  S   +R    +P PP
Sbjct:   80 RAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRD--PAWQKVSPGILAASPEQEQATEQEETLSPSSERPS-KRPRPP 341          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 4.800e-54
Identity = 131/266 (49.25%), Postives = 163/266 (61.28%), Query Frame = 1
Query:  352 TRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXX--KGGNDERDAISSATVTGENLVKTTA-KATVSSLPSPAPAAEP---SSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDGTGQRKGTSAGRDRSL*SKPGPP 1131
            TRAPS+ D+ GA  A +  + +                      GG D R   S    T E+L  T + + TVSSLPSP  AA     SSP NR  D++GMAPSVEF LLRQARE AK EA  SG GRRPRAPSRRALEA+G+LK  GAQW++RE++AE+ R KAELR+QR+QY+AAG KSGVVLE FV  A GT   GDG+   V    G G+ATT  G +  P WQKVSPE+L+A + +   T + +  SA  ++    +P PP
Sbjct:   29 TRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGKDNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRD--PAWQKVSPEMLAASAEQEQATEKEELLSASAEKRPSKRPRPP 292          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.800e-51
Identity = 145/341 (42.52%), Postives = 177/341 (51.91%), Query Frame = 1
Query:   16 NRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSN--TDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXX--------------KGGNDERDAISSATVTGENLVKTTA-----KATVSSLPSPAPAAEPSSPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERVGEVRGAGA 975
            NRPG S      S + +NR+CLFPGC ARP +GLPGA RAVYCFSHKKG MV L  E  A+ N+  K+ +SA                                      KK R  +    D+ GAK+ARR   + E                                 GG+    A ++A  T E  VK+ A     K+T  +       A P  P +R +D  GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQW++REK+AE  R  +ELR++RK+ + AGLK GVVLE FVP A    A      E  G +RG GA
Sbjct:  229 NRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAAPTEGKKKKQTQ-------------------------AKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRAPSRRAL-----EASGRLRGDGA 537          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 3.450e-50
Identity = 140/314 (44.59%), Postives = 168/314 (53.50%), Query Frame = 1
Query:   16 NRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGENLV---KTTAKATVSSLPSPAPAAEP--------SSPHNRLAD--------SSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFV 900
            NRPG S      S + +NR CLFPGC ARP YGLPGA  AVYCFSHKKG MV L    PA+ N+  K  + A        XXXXXXXX                       +       D+ GAKKARR   ++E                    GN+ +  ++  T   E  V    T A A  S + +  PAA+P          P + +A         S GMAPSVE L+LRQARE AKTEAEASG GRR RAPSRRALEA+G+LKG GAQW++REK+AE  R   ELR++RK+ + AGLK GVVLE FV
Sbjct:   75 NRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTPAAPTEGKRKXXXXXXXX-----------------------RKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKNRGNETK--VNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.820e-48
Identity = 128/313 (40.89%), Postives = 159/313 (50.80%), Query Frame = 1
Query:   19 RPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDERDAISSATVTGE---NLVKTTAKATVSSLPSPAPAAEPS----------------SPHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFV 900
            RPG S      S++ +  +CLFP C ARP YGLPGA RA YCFSHKKG MV L  E PA+ N+  K  + A                                      ++       D+ GAKKARR   ++E                  K   D +  ++      E     + T A A  S + + +PAA+PS                 P      S GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQW++REK+AE  R  +ELR++RK+ + AGLK GVVLE FV
Sbjct:  176 RPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVTPAAPTEGKRKKQKKGHE-----------------------ERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGA--KKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463          
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.890e-47
Identity = 140/314 (44.59%), Postives = 171/314 (54.46%), Query Frame = 1
Query:   16 NRPGLSGGHDGVSQSSRNRTCLFPGCNARPEYGLPGATRAVYCFSHKKGPMVQLLKEPPALPNNAGKAESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTKKTRAPSNTDRNGAKKARRGLQVREXXXXXXXXXXXXXXXXXXKGGNDER------------DAISSATVTGENLVKTTAKATVSSLPSPAPAAEPSS-------PHNRLADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFV 900
            NRP  S      S + +NR+CLFPGC+ARP YGLPGA RAVYCFSHKKG MV L  + PA+ NN  K  ++          XXXXXXXXXXX                           D+ GAKKARR   ++E                     N+++             AI++A   G + + T + A    + S   A EP+        P NR   S GM+PSVE L+LRQARE AK EAEASG GRR RAPSRRALEA+GRL+G GAQW++REKRAE  R   ELR++RK+ + AGL  GVVLE FV
Sbjct:  175 NRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAPTEGKRKKXXXXXXXXXXXSM-----------------------TADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNR--PSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1272.2071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G0V0_ECTSI3.340e-15371.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L360_9PHAE5.990e-14269.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LLY6_9PHAE3.740e-14072.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0U7_ECTSI8.800e-9957.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEM4_ECTSI2.110e-5551.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L640_9PHAE4.800e-5449.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLI4_9PHAE1.800e-5142.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH07_ECTSI3.450e-5044.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYF0_9PHAE1.820e-4840.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW8_ECTSI1.890e-4744.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1272contigE-fasciculatus_F_contig1272:142..2054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1145
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1272.2071.1prot_E-fasciculatus_F_contig1272.2071.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1272 772..2022 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927779.5843115-UTR-E-fasciculatus_F_contig1272:141..2301622927779.5843115-UTR-E-fasciculatus_F_contig1272:141..230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 142..230 +
1695995690.5714881-UTR-E-fasciculatus_F_contig1272:141..2301695995690.5714881-UTR-E-fasciculatus_F_contig1272:141..230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 142..230 +
1622927779.5954378-UTR-E-fasciculatus_F_contig1272:695..7711622927779.5954378-UTR-E-fasciculatus_F_contig1272:695..771Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 696..771 +
1695995690.586498-UTR-E-fasciculatus_F_contig1272:695..7711695995690.586498-UTR-E-fasciculatus_F_contig1272:695..771Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 696..771 +
1622927779.6297014-UTR-E-fasciculatus_F_contig1272:2022..20541622927779.6297014-UTR-E-fasciculatus_F_contig1272:2022..2054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 2023..2054 +
1695995690.6151578-UTR-E-fasciculatus_F_contig1272:2022..20541695995690.6151578-UTR-E-fasciculatus_F_contig1272:2022..2054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1272 2023..2054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927779.6068175-CDS-E-fasciculatus_F_contig1272:771..8541622927779.6068175-CDS-E-fasciculatus_F_contig1272:771..854Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 772..854 +
1695995690.598367-CDS-E-fasciculatus_F_contig1272:771..8541695995690.598367-CDS-E-fasciculatus_F_contig1272:771..854Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 772..854 +
1622927779.618708-CDS-E-fasciculatus_F_contig1272:1157..20221622927779.618708-CDS-E-fasciculatus_F_contig1272:1157..2022Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 1158..2022 +
1695995690.6069055-CDS-E-fasciculatus_F_contig1272:1157..20221695995690.6069055-CDS-E-fasciculatus_F_contig1272:1157..2022Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1272 1158..2022 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1272.2071.1

>prot_E-fasciculatus_F_contig1272.2071.1 ID=prot_E-fasciculatus_F_contig1272.2071.1|Name=mRNA_E-fasciculatus_F_contig1272.2071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=316bp
MVQLLKEPPALPNNAGKAESSAAVVATRKATTGKLRRQGPAVAAAAAAAA
AEPAAASVGTKKTRAPSNTDRNGAKKARRGLQVREEDDDTDSGGKHVSKK
RRSKGGNDERDAISSATVTGENLVKTTAKATVSSLPSPAPAAEPSSPHNR
LADSSGMAPSVEFLLLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRL
KGTGAQWLSREKRAEDLRFKAELRQQRKQYQAAGLKSGVVLEMFVPAATG
TEAAGDGIEERVGEVRGAGAATTPRGGNGNPGWQKVSPEVLSAPSAKRDG
TGQRKGTSAGRDRSL*
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mRNA from alignment at E-fasciculatus_F_contig1272:142..2054+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1272.2071.1 ID=mRNA_E-fasciculatus_F_contig1272.2071.1|Name=mRNA_E-fasciculatus_F_contig1272.2071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1913bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1272:142..2054+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTAATCTCAGGCGCCAACCGACCGGGGCTATCCGGGGGGCACGACGGTGT GAGCCAGTCGTCGCGGAATCGCACCTGCCTCTTCCCAGGGTGAGAAAGAT CAAAACCGAAGACAGAGACTGGCAATCCTCAAAATTCTTTGACAAGCATC TGCCGTTTGGTGGTTTTTCGTACCATCGTGGAAGGCATGCACGTCATTTC GACAGGCGGTTCGTCGGGGTGTAGAACAAAACCATGCCGTTGTTCACGCT TTGCGGTTCATCCTTGCCCACATTCGGGCATTTTTCTGCGTAGTGGCAGG GTTCCACGCAGGTTCGTCGGCAAACTCATGCCACGGTATATAATTCAATA TTCCCGTTTTTTTCGTTTGTTGATGGACGGAAACTGCATCAGAAACGACC TTAGAAGAAGAACAACGAGTTCGTGGTAGGCGCCTGCGGTGCCAGTCGTT GAGCAGGAACAACAGACAACGGTAGCTTCCCTGACAAGCACTTCAGTACA GTGTTCCATGAATATCTAAATATTTCACATTTCTGCAATCGTCGCTCGTA CCAGATGTAATGCTCGACCCGAGTACGGCCTGCCGGGTGCAACGCGCGCC GTGTACTGCTTCTCCCACAAGAAGGGTCCAATGGTTCAACTCTTAAAGGA ACCACCTGCCCTTCCAAACAATGCTGGAAAAGCCGAGAGCTCTGCTGCCG TAGTTGCCACAAGGTTCGTTTTGGTTCGGGTTTCGGTAGCCAAGAAATGC TTGTGTGCCGGCAAGACCACGTGGTACCTCCTTGTGAACCTATCGCGAAA CAGTAGTTGACGGCTGTCGTAATTCCCCCAAATACGGTCGATGCAGCCGT TTCTTTCTTGTGTCGTGTCTCCTTCCAGCCCATAGATGAGCAACGAAGTG CTGCGTCGTTTCGCTTGTCGGCATCCCGGAAAACCGTGACCGAGGTCCTT TCTTTGAGAACAGTAAGACATGAACCAGGACACCCTACCGTTGCCGGTTG CGTCACATCGCTGCAGGAAAGCCACCACCGGTAAACTTCGCCGCCAGGGT CCAGCTGTAGCAGCAGCAGCAGCGGCAGCAGCAGCAGAACCTGCTGCTGC ATCAGTTGGAACAAAGAAAACTCGAGCGCCGAGTAACACAGATCGCAATG GGGCTAAGAAAGCTCGTCGAGGGCTGCAGGTAAGGGAGGAAGACGATGAC ACCGATTCCGGAGGCAAGCACGTTAGCAAGAAGAGGCGTTCAAAGGGCGG AAATGACGAACGGGACGCGATTTCCAGCGCCACGGTGACTGGAGAAAACC TGGTGAAAACGACCGCTAAGGCTACTGTATCGTCCCTCCCATCTCCAGCT CCCGCCGCCGAACCCTCATCTCCCCACAACCGGCTGGCCGACTCGTCGGG AATGGCCCCATCCGTAGAGTTTCTCCTCCTGAGGCAGGCGAGGGAGGATG CCAAGACGGAGGCCGAGGCCAGCGGCCTGGGCAGAAGGCCCCGCGCACCG TCACGGCGGGCCCTTGAGGCGGCGGGCCGGCTGAAGGGCACCGGTGCGCA ATGGTTGAGTCGCGAGAAAAGGGCCGAGGATCTGAGATTCAAGGCGGAGC TGAGGCAGCAGCGGAAGCAGTACCAGGCGGCAGGCCTGAAGTCAGGGGTT GTGCTGGAGATGTTCGTACCGGCGGCGACCGGGACCGAGGCAGCGGGTGA TGGGATCGAGGAGAGGGTTGGGGAGGTTCGAGGGGCGGGGGCAGCAACCA CACCCAGAGGTGGTAACGGTAACCCCGGGTGGCAGAAGGTTTCGCCAGAA GTTCTCTCAGCGCCTTCTGCAAAACGAGACGGTACGGGACAGAGGAAAGG AACTTCCGCAGGGAGAGACAGAAGCCTGTGAAGCAAGCCAGGTCCACCGG AGCAGCGAAGAGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1272:142..2054+

>mRNA_E-fasciculatus_F_contig1272.2071.1 ID=mRNA_E-fasciculatus_F_contig1272.2071.1|Name=mRNA_E-fasciculatus_F_contig1272.2071.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1896bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1272:142..2054+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTTCAACTCTTAAAGGAACCACCTGCCCTTCCAAACAATGCTGGAAA
AGCCGAGAGCTCTGCTGCCGTAGTTGCCACAAGATGGTTCAACTCTTAAA
GGAACCACCTGCCCTTCCAAACAATGCTGGAAAAGCCGAGAGCTCTGCTG
CCGTAGTTGCCACAAGGAAAGCCACCACCGGTAAACTTCGCCGCCAGGGT
CCAGCTGTAGCAGCAGCAGCAGCGGCAGCAGCAGCAGAACCTGCTGCTGC
ATCAGTTGGAACAAAGAAAACTCGAGCGCCGAGTAACACAGATCGCAATG
GGGCTAAGAAAGCTCGTCGAGGGCTGCAGGTAAGGGAGGAAGACGATGAC
ACCGATTCCGGAGGCAAGCACGTTAGCAAGAAGAGGCGTTCAAAGGGCGG
AAATGACGAACGGGACGCGATTTCCAGCGCCACGGTGACTGGAGAAAACC
TGGTGAAAACGACCGCTAAGGCTACTGTATCGTCCCTCCCATCTCCAGCT
CCCGCCGCCGAACCCTCATCTCCCCACAACCGGCTGGCCGACTCGTCGGG
AATGGCCCCATCCGTAGAGTTTCTCCTCCTGAGGCAGGCGAGGGAGGATG
CCAAGACGGAGGCCGAGGCCAGCGGCCTGGGCAGAAGGCCCCGCGCACCG
TCACGGCGGGCCCTTGAGGCGGCGGGCCGGCTGAAGGGCACCGGTGCGCA
ATGGTTGAGTCGCGAGAAAAGGGCCGAGGATCTGAGATTCAAGGCGGAGC
TGAGGCAGCAGCGGAAGCAGTACCAGGCGGCAGGCCTGAAGTCAGGGGTT
GTGCTGGAGATGTTCGTACCGGCGGCGACCGGGACCGAGGCAGCGGGTGA
TGGGATCGAGGAGAGGGTTGGGGAGGTTCGAGGGGCGGGGGCAGCAACCA
CACCCAGAGGTGGTAACGGTAACCCCGGGTGGCAGAAGGTTTCGCCAGAA
GTTCTCTCAGCGCCTTCTGCAAAACGAGACGGTACGGGACAGAGGAAAGG
AACTTCCGCAGGGAGAGACAGAAGCCTGTGAGAAAGCCACCACCGGTAAA
CTTCGCCGCCAGGGTCCAGCTGTAGCAGCAGCAGCAGCGGCAGCAGCAGC
AGAACCTGCTGCTGCATCAGTTGGAACAAAGAAAACTCGAGCGCCGAGTA
ACACAGATCGCAATGGGGCTAAGAAAGCTCGTCGAGGGCTGCAGGTAAGG
GAGGAAGACGATGACACCGATTCCGGAGGCAAGCACGTTAGCAAGAAGAG
GCGTTCAAAGGGCGGAAATGACGAACGGGACGCGATTTCCAGCGCCACGG
TGACTGGAGAAAACCTGGTGAAAACGACCGCTAAGGCTACTGTATCGTCC
CTCCCATCTCCAGCTCCCGCCGCCGAACCCTCATCTCCCCACAACCGGCT
GGCCGACTCGTCGGGAATGGCCCCATCCGTAGAGTTTCTCCTCCTGAGGC
AGGCGAGGGAGGATGCCAAGACGGAGGCCGAGGCCAGCGGCCTGGGCAGA
AGGCCCCGCGCACCGTCACGGCGGGCCCTTGAGGCGGCGGGCCGGCTGAA
GGGCACCGGTGCGCAATGGTTGAGTCGCGAGAAAAGGGCCGAGGATCTGA
GATTCAAGGCGGAGCTGAGGCAGCAGCGGAAGCAGTACCAGGCGGCAGGC
CTGAAGTCAGGGGTTGTGCTGGAGATGTTCGTACCGGCGGCGACCGGGAC
CGAGGCAGCGGGTGATGGGATCGAGGAGAGGGTTGGGGAGGTTCGAGGGG
CGGGGGCAGCAACCACACCCAGAGGTGGTAACGGTAACCCCGGGTGGCAG
AAGGTTTCGCCAGAAGTTCTCTCAGCGCCTTCTGCAAAACGAGACGGTAC
GGGACAGAGGAAAGGAACTTCCGCAGGGAGAGACAGAAGCCTGTGA
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