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Homology
BLAST of mRNA_E-fasciculatus_F_contig12715.2070.1 vs. uniprot
Match: A0A6H5L0B2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B2_9PHAE) HSP 1 Score: 473 bits (1216), Expect = 2.970e-160 Identity = 236/264 (89.39%), Postives = 248/264 (93.94%), Query Frame = 1
Query: 1 WCSRMNLRMSQVIEHVRSGFMSNVGRFPGVHITSGHYGTLKGIAGALDIDAIDGIPEYASHFAFELLYNGSANHLAGEEDFAIRIMYQDGSSTSDLNFAVMGQVYDGSGSISDFDEELSTLRDYTTGIMGWTQWDYLMDYQNAGEPVVYESVEEWCLDCLATAPDTCIAQELELMTQQWEEATVLAEQAMANYEEADDGIGG---AHVALLSIFGVVLGIGVGICIKPCVDRHNNKLKKNSQASTISGDRGLEAWSSAANRWDG 783
+ + MNLRMSQVIEHVRSG+MSNVGRFPG+HITSGHYGTLKGIAGALDIDAIDGIPEYASHFAFELLYNGSANH AGEEDFAIRIMYQDGSSTSDLNFAVMGQVYDGSGSISDFDEELSTLRDY TGIMGWTQWDYLMDYQNAG+PVVYESVEEWCLDCLATAPDTCIAQELELMTQQWEEA+V AEQA A+Y+EADDGIGG HVALLSIFGVVLGIG+GICIKPC+DRHN L + SQASTISGDRGLEAWSSAAN +G
Sbjct: 365 YLTEMNLRMSQVIEHVRSGYMSNVGRFPGMHITSGHYGTLKGIAGALDIDAIDGIPEYASHFAFELLYNGSANHRAGEEDFAIRIMYQDGSSTSDLNFAVMGQVYDGSGSISDFDEELSTLRDYDTGIMGWTQWDYLMDYQNAGKPVVYESVEEWCLDCLATAPDTCIAQELELMTQQWEEASVQAEQATADYKEADDGIGGKYCVHVALLSIFGVVLGIGIGICIKPCLDRHNKMLNQKSQASTISGDRGLEAWSSAANSNNG 628
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 492.7 |
| Seed ortholog evalue | 1.1e-136 |
| Seed eggNOG ortholog | 2880.D7G1G5 |
| KEGG rclass | RC00002,RC00017 |
| KEGG ko | ko:K07756,ko:K12483,ko:K19283 |
| KEGG Reaction | R09087,R10548,R11527 |
| KEGG Pathway | ko04070,ko04138,ko04144,map04070,map04138,map04144 |
| EggNOG free text desc. | acid phosphatase activity |
| EggNOG OGs | KOG3720@1,KOG3720@2759 |
| EC | 2.7.4.21,3.1.3.2,3.1.3.5 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko04131,ko04147 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 783 |
| Cds size | 771 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12715.2070.1 >prot_E-fasciculatus_F_contig12715.2070.1 ID=prot_E-fasciculatus_F_contig12715.2070.1|Name=mRNA_E-fasciculatus_F_contig12715.2070.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=257bp
MNLRMSQVIEHVRSGFMSNVGRFPGVHITSGHYGTLKGIAGALDIDAIDG
IPEYASHFAFELLYNGSANHLAGEEDFAIRIMYQDGSSTSDLNFAVMGQV
YDGSGSISDFDEELSTLRDYTTGIMGWTQWDYLMDYQNAGEPVVYESVEE
WCLDCLATAPDTCIAQELELMTQQWEEATVLAEQAMANYEEADDGIGGAH
VALLSIFGVVLGIGVGICIKPCVDRHNNKLKKNSQASTISGDRGLEAWSS
AANRWDG back to topmRNA from alignment at E-fasciculatus_F_contig12715:16..3462+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig12715.2070.1 ID=mRNA_E-fasciculatus_F_contig12715.2070.1|Name=mRNA_E-fasciculatus_F_contig12715.2070.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3447bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12715:16..3462+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGGTGCTCCAGAATGAACCTCCGCATGTCACAGGTGATTGAGCACGTGCG
CAGCGGCTTCATGAGCAACGTGGGCCGGTTCCCCGGAGTCCACATCACGT
CCGGCCACTATGGGACGCTCAAGGGCATCGCGGGGGCTCTCGACATCGAC
GCTATCGACGGCATTCCTGAGTGAGTTTGTTGTCGCACGAGGCGTTGTTG
AATTTTTGGTGGTGTTATCTTTGTATTGGCGGCAGTATTTTCGTGGATGC
TTGTTCTGGCCTTGGACGTTACAAAATCACCTTTGTGTTTGGTTGACGCC
AATTATTGTTCTTGCTGTGGCCGTTGCAGTAGCACCTTTTTTTCCCGTGA
ATCTTGTCCTTGCTTCGAACATTACAACCATCACTTTTTTTTTCGCAAAT
CCTTGTCCTTCTGCTGTGGACTTTACAGCAGTAGCATTTTTTTTTTTATG
TACATGGCGCCATACCGTATTCGTGCTGTGGACGTTACAACAACACCTTT
TTTGTTTGCCGTAAATCCTTGTTGTTGGCGTGGGTACAGATACGCTTCCC
ACTTTGCGTTCGAGCTCCTGTACAACGGGTCTGCCAACCATCTGGCTGGG
GAGGAAGACTTCGCCATCCGAATCATGTACCAGGACGGGTGAGCTGTTGT
TCGTTACAATACTGCCTTATCCTTATCCTTATCCTTTCTCGTTGTATAGC
AGTAGCTCTGTGCGTCTGTGGGTGCTCATCGTGCTGACGTAGCGATCAGA
ACCATGTTCAAAGCTGTTACTGTCTTTGTTGCTCATAGTATATGCTTTTG
CGTTGTGCAAGCTTGTCGTTCTGACTTCGAATCGTAAGACAAGACGGCCG
GACTGTTGCCTTTGTCTTAGTCTTGGTCCGTGTGTGGCAGCTATTGTGTG
TGGGTGCTTGTTGTGGCAATCCTTCTCTGTGTATCATATGGCAGGAGAAC
GGTAGTTGTTTTTTTATCTTTTTGTCGGTGTGGATTTTTTATTGTTGTTG
TTGTGGTGATCGGGGTTGTAGTGGACAAGACGGCCGGGCTTCCTAGCCCC
CCAAAGGCTTGAGTTGCCCCCCTTCCACCCTTGCTGTCCTAATGTGCGCT
ACCCACTGTCCCTCCCTCCCTCCTGCTGAATGCACGACCCCACCCCCCAA
CCTGGCTTGTCAAACCAACATTGAAACGTCCGTTCGCCTCTCACCAAAAA
CTTGCCTCCTGCTACGTGCACAACCCTCCACCCCCCACAACCTGGTCAAT
CAACTGTCGGCAAAAGCTCGAGCACTAGCGACCTGAACTTCGCGGTGATG
GGCCAAGTGTACGATGGCTCCGGGTCCATCTCCGACTTCGACGAAGAGCT
ATCGACGTTGAGAGACTACACCACGGGAATCATGGGGTGGACCCAGTGGG
ACTACCTCATGGACTACCAAAACGCGGGGGAACCTGTTGTGTACGAATCC
GTCGAGGAATGGTGAGCACAAGAAATAAGTAGAAATATTTTACGTACAAG
CATAGAAAGGCTACCCCGGGATATATCCATAGTCGAAGGAGATGTGTTGC
AGTATTTACAGTAGTGAGTTGAAGAAAAGTCCGGCTAGATTGTACCACTT
TTTACTCCGACGGTGTTTTTGTGCGTTTGGAGGAGACGTCATGTACGACA
ACTACAGAGTAGTTTCCAAGTTTTTAAATTATTGCTTCATCGATTCAGCT
GCTGTTTGGAAGGGTAAGAGGGAACACAGATTCGAGCAAAAGGGGTCCCG
CCGAAATTGCCGTTTGTTACGCACCCCAGGTGCCTGACCCCCCCCCCCTA
CACTTTGGCAGAGTAGGAAGTAGGAAGGCACTATTGACCATCATCGGTGA
ACGGTCCTGTGAAAGCAATGCTCCGTCCACTTGAGGACGCGTGGTCAATG
ACCTAACCCCTAAGGCATGTGAAACATAAGAGTACCCCCCGCGCGCCCCC
GCCCCCGCCCTACAGGTGCCTGGACTGTCTTGCCACCGCCCCCGATACTT
GCATTGCCCAGGAGCTAGAGCTGATGACACAGCAGTGGGAGGAGGCCACC
GTTCTGGCTGAACAGGCGATGGCAAATTACGAGGAGGCTGACGACGGCAT
CGGAGGTAAGGAGGAGACGTTGAGATGCCACACCAAGGTATCGGACGCCA
GTAACTACTGTAGGACGCGTGAGATACAACACATGTATGTATCGGAAGTT
AGGATCTACCGTAGAACATGTGAGATAGATACCACACACACCCAGGATCG
ATCGGAGGTAAGAACCTCTTTGGGCGAGGCTTAGGTGCCTAGTTCCTAGG
GCCATGCTACGACTGGTCGCTATTCTTGGTTTTGGTGTTGGGGCTCTCAC
CGAACTCGCGAATGGTGTCGAGTTCTCTGATTTGGAGTGTCTTGAGGCCT
CAGTTTGTAGATTTCGAGTTTGTTTAGGCCACACCAGTTTCTTAACTGCC
AAGGTCTTTAGTATGGGCGCTTTCTATGCTGCTGTATGGTAGGACACGTC
AAATACTACACACCCTTAGGATCGAATTTGAGGCTCGGTTACTTCACGAC
GACGAGGATTCGAAAATCACGATGCCATGATACAAGCCGTTCTAGGAAAC
CTCTCGGCTGGACGGTTATATCGCCGGCATTTTTCGGTGCCGTTTCGTCG
ACCTTTGAAAAATCAATCCCGCAGTAGCCAGCTTCTGTTGAAAGGTTGAC
GGACCGGACCGTTCATCTGTGCAGCGTGAAGCTCTCTCTGGACGAAGCCA
TATTTGTGCCTCCCATGCCATGAAAGTCTCTGTCCCATGGTTTCCGTCCA
CGAAATCGGGTGCTCGGTTTTCGCTGCTGAGCTCTGTCGGGGATGGGCTT
TTCGCGTTGCCCGCCCCGCCTCTCAAGAGCTCAAGAGTGCCATTGCCATT
TGGTTCCCGCGGATGAGTTGGAGTGTCTGTCCCCTTTACATTTCGGAGCA
CTTTCGGGATACTGTCGTGGCTGCGATATGAGAGAAGAGAAGAGGGTGGT
GTGACAACGGCCCTCGACCCTCTTTCATATCGAAGCCCCGAGATAAAGAG
GGTAGTCAAATATAGCGGGTCGAGTCTGTGACAACCGACTGCGACCCTCT
TGTATCGGAGCCCCCGGTATCCTTGTATCCGAGCCCTCCCTTTTTGATGG
CGCCCTCTTATCTTATCTTATATCGGATACCACGACTGCTGTAAATATTC
TATTCTAGTGTTTTGCTTTGCCCTCCGCCCTCAAACACGTACGGCTTCCT
TCCGTCCCATCGACGCAGGGGCCCACGTCGCCCTCCTGAGCATCTTCGGG
GTGGTCCTTGGCATCGGCGTCGGCATCTGCATCAAGCCCTGCGTGGACAG
GCACAACAACAAGCTCAAGAAGAATAGCCAAGCGTCCACCATCTCGGGGG
ACCGCGGGCTTGAGGCGTGGTCTTCTGCTGCCAACAGGTGGGACGGA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig12715:16..3462+ >mRNA_E-fasciculatus_F_contig12715.2070.1 ID=mRNA_E-fasciculatus_F_contig12715.2070.1|Name=mRNA_E-fasciculatus_F_contig12715.2070.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1542bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12715:16..3462+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACCTCCGCATGTCACAGGTGATTGAGCACGTGCGCAGCGGCTTCAT
GAGCAACGTGGGCCGGTTCCCCGGAGTCCACATCACGTCCGGCCACTATG
GGACGCTCAAGGGCATCGCGGGGGCTCTCGACATCGACGCTATCGACGGC
ATTCCTGAATGAACCTCCGCATGTCACAGGTGATTGAGCACGTGCGCAGC
GGCTTCATGAGCAACGTGGGCCGGTTCCCCGGAGTCCACATCACGTCCGG
CCACTATGGGACGCTCAAGGGCATCGCGGGGGCTCTCGACATCGACGCTA
TCGACGGCATTCCTGAATACGCTTCCCACTTTGCGTTCGAGCTCCTGTAC
AACGGGTCTGCCAACCATCTGGCTGGGGAGGAAGACTTCGCCATCCGAAT
CATGTACCAGGACGGATACGCTTCCCACTTTGCGTTCGAGCTCCTGTACA
ACGGGTCTGCCAACCATCTGGCTGGGGAGGAAGACTTCGCCATCCGAATC
ATGTACCAGGACGGCTCGAGCACTAGCGACCTGAACTTCGCGGTGATGGG
CCAAGTGTACGATGGCTCCGGGTCCATCTCCGACTTCGACGAAGAGCTAT
CGACGTTGAGAGACTACACCACGGGAATCATGGGGTGGACCCAGTGGGAC
TACCTCATGGACTACCAAAACGCGGGGGAACCTGTTGTGTACGAATCCGT
CGAGGAATGCTCGAGCACTAGCGACCTGAACTTCGCGGTGATGGGCCAAG
TGTACGATGGCTCCGGGTCCATCTCCGACTTCGACGAAGAGCTATCGACG
TTGAGAGACTACACCACGGGAATCATGGGGTGGACCCAGTGGGACTACCT
CATGGACTACCAAAACGCGGGGGAACCTGTTGTGTACGAATCCGTCGAGG
AATGGTGCCTGGACTGTCTTGCCACCGCCCCCGATACTTGCATTGCCCAG
GAGCTAGAGCTGATGACACAGCAGTGGGAGGAGGCCACCGTTCTGGCTGA
ACAGGCGATGGCAAATTACGAGGAGGCTGACGACGGCATCGGAGGTGCCT
GGACTGTCTTGCCACCGCCCCCGATACTTGCATTGCCCAGGAGCTAGAGC
TGATGACACAGCAGTGGGAGGAGGCCACCGTTCTGGCTGAACAGGCGATG
GCAAATTACGAGGAGGCTGACGACGGCATCGGAGGGGCCCACGTCGCCCT
CCTGAGCATCTTCGGGGTGGTCCTTGGCATCGGCGTCGGCATCTGCATCA
AGCCCTGCGTGGACAGGCACAACAACAAGCTCAAGAAGAATAGCCAAGCG
TCCACCATCTCGGGGGACCGCGGGCTTGAGGCGTGGTCTTCTGCTGCCAA
CAGGTGGGACGGAGGGCCCACGTCGCCCTCCTGAGCATCTTCGGGGTGGT
CCTTGGCATCGGCGTCGGCATCTGCATCAAGCCCTGCGTGGACAGGCACA
ACAACAAGCTCAAGAAGAATAGCCAAGCGTCCACCATCTCGGGGGACCGC
GGGCTTGAGGCGTGGTCTTCTGCTGCCAACAGGTGGGACGGA back to top
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