prot_E-fasciculatus_F_contig1271.2067.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1271.2067.1
Unique Name	prot_E-fasciculatus_F_contig1271.2067.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	452

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1271.2067.1 vs. uniprot
Match: D8LRD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD8_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 1.270e-231
Identity = 406/451 (90.02%), Postives = 415/451 (92.02%), Query Frame = 0

Query:    1 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSTGQEGECALPLPGSDVGEYLRHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDERWPAMSGLFNNTEGGLVGSAXXXXXXXXXXXXXXXXDTMRGGGVPRGADVDKAEEECAGTQLAELLASLPPATPPKLSGLVDVESYTDLPSHMDDLADGAARGGSGNLGXXXXXXXXVRPATSGGPPRGAQAEPRESAASRQSIXXXXXXXXXXXXXXXXXXXXRRGPGGVNETRLSSSCSLSSASAGPLHTLPAQREEDVLGTSGDGXXXXXXXXNAREYLKGPQRHGDSGDFGMFGEDLLGSHAFDSDLMKLMTAEAI 451
            MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSW ATTVTSALLFIYERHGVYSRLYELVAPAQRLSGS GQE ECALPLPGSDVGEYLRHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQD+RWPAMSGLFNNT G      XXXXXXXXXXXXXXXXDTMRGGGVPRGADVDKAEEECAGTQLAELLASLPPA+PPKLSGLVDVESYTDLPSHMDDLA+GAARGGS    XXXXXXXX            AQAEPRESAA RQSIXXXXXXXXXXXXX       RRGPGGVNETRLSSSCSLSSASAGPLHTLP+QR+EDVLG+SGDGXXXXXXX NAREYLKGPQRHGDS DFG++G+DLLGSHAFDSDLMKLMTAEAI
Sbjct:  460 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWIATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSAGQERECALPLPGSDVGEYLRHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLFNNTGGXXXXXXXXXXXXXXXXXXXXXXDTMRGGGVPRGADVDKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMDDLAEGAARGGSXXXXXXXXXXXXXXXXX-------AQAEPRESAAPRQSIXXXXXXXXXXXXXATSGSM-RRGPGGVNETRLSSSCSLSSASAGPLHTLPSQRQEDVLGSSGDGXXXXXXX-NAREYLKGPQRHGDSDDFGIYGDDLLGSHAFDSDLMKLMTAEAI 901

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1271.2067.1 vs. uniprot
Match: A0A6H5J936_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J936_9PHAE)

HSP 1 Score: 629 bits (1621), Expect = 3.470e-213
Identity = 383/510 (75.10%), Postives = 394/510 (77.25%), Query Frame = 0

Query:    1 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSTGQEGECALPLPGSDVGEYLRHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDERWPAMSGLFNNTEGGLVGSAXXXXXXXXXXXXXXXXD--TMRGGGVPRGADVDKAEEECAGTQLAELLASLPPATPPKLSGLVDVESYTDLPSHMDDLADGAARGGS--------------GNLGXXXXXXXXVRPATSG-----------------------------------------GPPRGAQAEPRESAASRQSIXXXXXXXXXXXXXXXXXXXXRRGPGGVNETRLSSSCSLSSASAGPLHTLPAQREEDVLGTSGDGXXXXXXXX--NAREYLKGPQRHGDSGDFGMFGEDLLGSHAFDSDLMKLMTAEAI 451
            MLTQTGDRGLPAALQAGDP AFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQ LSGS GQEGECALPLPGSDVGEYLRH CRPSTFCQLVVTISRLTDRGTKNFCPTPDASQ ASQD+RWPAMSGLFNNT G LVGSA           XXXXX   TMR    PRGADV+KAEEECAGTQLAELLASLPPA+PPKLSGLVDVESYTDLPSHM+DLA GAARGGS              G            R ++ G                                          P  GAQAEPRESAA RQSI   XXXXXXXXX        RRGPGGVNETRL SSCSLSSASAGPLHTL +QR+EDVLG+SGD XXXXXXXX  NARE+LKGPQRHGDS DFGM+GEDLLGSHAFDSDLMKLMTAEAI
Sbjct:  657 MLTQTGDRGLPAALQAGDPHAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQGLSGSAGQEGECALPLPGSDVGEYLRHACRPSTFCQLVVTISRLTDRGTKNFCPTPDASQSASQDDRWPAMSGLFNNTGGDLVGSAAAGAGARLADGXXXXXXXXTMRXXXXPRGADVEKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLAVGAARGGSXXXXXXXXXXXXESGYFRGASPLPFLGRTSSQGREHQYRQQYHPPMLPPPDHQQXXQQRQXXXXXXXXXXXXLRDPEGGAQAEPRESAAPRQSIGGSXXXXXXXXXATSNSM--RRGPGGVNETRLLSSCSLSSASAGPLHTLSSQRQEDVLGSSGDXXXXXXXXXXXNAREFLKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI 1164

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1271.2067.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1271.2067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRD8_ECTSI	1.270e-231	90.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J936_9PHAE	3.470e-213	75.10	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..47
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..66
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..451

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1271	contig	E-fasciculatus_F_contig1271:14922..18994 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1271.2067.1	mRNA_E-fasciculatus_F_contig1271.2067.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1271 14764..19027 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1271.2067.1 ID=prot_E-fasciculatus_F_contig1271.2067.1|Name=mRNA_E-fasciculatus_F_contig1271.2067.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=452bp
MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLAR
LICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTV
TSALLFIYERHGVYSRLYELVAPAQRLSGSTGQEGECALPLPGSDVGEYL
RHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDERWPAMSGLF
NNTEGGLVGSAAAAAGARRADGGGGGGDTMRGGGVPRGADVDKAEEECAG
TQLAELLASLPPATPPKLSGLVDVESYTDLPSHMDDLADGAARGGSGNLG
GGGGGGGGVRPATSGGPPRGAQAEPRESAASRQSIGGSDGGSGGSGGGSA
TSGGMRRGPGGVNETRLSSSCSLSSASAGPLHTLPAQREEDVLGTSGDGS
GSGGGGGNAREYLKGPQRHGDSGDFGMFGEDLLGSHAFDSDLMKLMTAEA
I*