mRNA_E-fasciculatus_F_contig1271.2066.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1271.2066.1 vs. uniprot
Match: D8LRD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD7_ECTSI) HSP 1 Score: 835 bits (2156), Expect = 2.360e-298 Identity = 491/645 (76.12%), Postives = 521/645 (80.78%), Query Frame = 1
Query: 1 MSLREQLEKLVSQKLATKGELDHAGMLALETLSKMAPEGEVDPVGGPSAGXXXXXXXXXDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSXXXXXXXXXXRDVVFVLEGSALKFFKSLKAGEIEWEPTPPASXXXXXXXXXXXXXXGVRKQSGKPPFRPPSTWAEVCNAFHDHYLPADGIARTSDTLCSLSQAAGESAPMLAQRQIGLTNHLSRLINGNGGQPNFWDAIMIRLFERALRTDLQRLQYAEPPCLTFQESVDRADRNALRLEKEKSKXXXXXXXXXXGGERPPEDNRLHHGAKPQDSSS-GVRDGNGVVQDSGCLKGPALVRSSSSSARGPLTVSGTGEDVTPVVGGFLPPRRKRENDAASGGGAGEGREGDRLQHGGSITPRSSDVGDGKEVVHGWGGLKGTAHARSSSSSSVVGGPLTVSGGVEGDAVAVGGFETRHSRSADRNGGGDETYGDRERAESILSDDGSQSTPAWQEEPEEDVIPGGRG---DGGEVKHGTRRGTGGKRKTQKRTRD----------TXXXXXXXXXXXXXXXXXXXXXXGHHARAQHRPSQPHRRRQPNPDNLPPCTVRGCKSRRATHSSNICFFHPE--HAQRNRTRRKDIFLKCFPMEDLGD 1887
M+LREQL+KLVSQKLA KGELDHAG+LALETLSKMAPEGEVDPVGG SAG DSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGS RDVVFVLEG+ALKFFKSLKAG++EWEPTPP S GV++Q+GKPPFRPPSTWAEV NAFHDHYLPADGIARTSDTL SLSQAA ES P L QRQ+GLTNHLSRLI NGGQ FW+AIMIRLFERALR DLQRLQ+AEPPC TFQESVDRADRNALRLEKEKSK XXX PPEDNRLHHG +PQDSSS G +G VQ SG LK PALVRSSSSSARGPLTVSGTGEDV PVVGGFLPP RKRENDA GGGAGEGR GDRLQHG S T RSSDVGDGKEVVHGWGGLKG AHARSSSSSSVV G LTV GGVE +AV VGGF+TRH RSADRN GGD RER ESILSDDGS+STPAWQ+EPEE V+PGG G DGGEVK RG+ GK+K+QKRTRD XXXXXXXXXXXXXXXXXXXXXX HARAQHRPSQPHRRRQP+PDN+PPCT GCK+RR THSSNICF+HP+ HA+RNR RRKDIFLK +ED G+
Sbjct: 1 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVGGSSAGGSSSVGGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQMEWEPTPPPSLQQRGAEAGAG---GVQQQAGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEXXXXXXXPPEDNRLHHGTRPQDSSSSGAGEGKEGVQSSGGLKAPALVRSSSSSARGPLTVSGTGEDVAPVVGGFLPPHRKRENDAG-GGGAGEGRGGDRLQHG-SKTQRSSDVGDGKEVVHGWGGLKGAAHARSSSSSSVVRGQLTVPGGVESEAVPVGGFQTRHGRSADRNDGGD-----RERVESILSDDGSRSTPAWQDEPEEHVVPGGSGEWGDGGEVKQDRSRGSRGKKKSQKRTRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARAQHRPSQPHRRRQPDPDNIPPCTNPGCKARRKTHSSNICFYHPDPAHARRNRMRRKDIFLKNHAVEDAGN 635
BLAST of mRNA_E-fasciculatus_F_contig1271.2066.1 vs. uniprot
Match: A0A6H5L3E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E1_9PHAE) HSP 1 Score: 793 bits (2049), Expect = 2.380e-282 Identity = 472/634 (74.45%), Postives = 498/634 (78.55%), Query Frame = 1
Query: 1 MSLREQLEKLVSQKLATKGELDHAGMLALETLSKMAPEGEVDPVGGPSAGXXXXXXXXXDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSXXXXXXXXXXRDVVFVLEGSALKFFKSLKAGEIEWEPTPPASXXXXXXXXXXXXXXGVRKQSGKPPFRPPSTWAEVCNAFHDHYLPADGIARTSDTLCSLSQAAGESAPMLAQRQIGLTNHLSRLINGNGGQPNFWDAIMIRLFERALRTDLQRLQYAEPPCLTFQESVDRADRNALRLEKEKSKXXXXXXXXXXGGERPPEDNRLHHGAKPQDSSSGVRDGNGVVQDSGCLKGPALVRSSSSSARGPLTVSGTGEDVTPVVGGFLPPRRKRENDAASGGGAGEGREGDRLQHGGSITPRSSDVGDGKEVVHGWGGLKGTAHARSSSSSSVVGGPLTVSGGVEGDAVAVGGFETRHSRSADRNGGGDETYGDRERAESILSDDGSQSTPAWQEEPEEDVIPGGRG---DGGEVKHGTRRGTGGKRKTQKRTRDTXXXXXXXXXXXXXXXXXXXXXXGHHARAQHRPSQPHRRRQPNPDNLPPCTVRGCKSRRATHSSNICFFHPEHAQ--RNRTRRKDIFLKCFPMEDLGD 1887
M+LREQL+KLVSQKLA KGELDHAG+LALETLSKMAPEGEVDPVGG SAG DSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGS RDVVFVLEG+ALKFFK LKAG+IEWEPTPP S GV++Q GKPPFRPPSTWAEV NAFHDHYLPADGIARTSDTL SL QAA ES P L QRQ+GLTNHLSRLI NGGQ FW+AIMIRLFERALR DLQRLQ+AEPPC TFQESVDRADRNALRLEKEKSK XX ERPPEDNRL G KPQ SSGV +G G VQ S KGPALV SSSS ARGPLT+SGT EDV PVVGGF PP K E GGGAGEGREGDRLQHG S T R+SDVGDGKE+VHGWGGLKG AHARS S VV GPLTV G VEG+ VAVG F+T H RSADRNGGGD RERAESILSDD S+STPAWQEEPEE V+PGG G DGGEVKH RG+ GK K+QKRTRD XXXXXXXXXXXXXXXXXXXGHHARAQ RPSQPHRRRQP PDN+ PCT CK++R THSSNICF+HP+ AQ RNR RRKDIFLK MED G+
Sbjct: 1 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVGGSSAGGGASVGVV-DSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKLLKAGQIEWEPTPPPSLQQRGAEAGAG---GVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLRQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRLRLGTKPQGGSSGVGEGKGGVQSSDGSKGPALVGSSSSLARGPLTLSGTFEDVAPVVGGFQPPHGKTEKKLG-GGGAGEGREGDRLQHG-SKTQRNSDVGDGKELVHGWGGLKGAAHARSPS---VVRGPLTVPGDVEGETVAVGSFQTGHGRSADRNGGGD-----RERAESILSDDESRSTPAWQEEPEEQVVPGGSGEWGDGGEVKHDRSRGSRGK-KSQKRTRDWQEDXXXXXXXXXXXXXXXXXXXGHHARAQRRPSQPHRRRQPVPDNVLPCTNPACKAKRKTHSSNICFYHPDPAQALRNRMRRKDIFLKTHAMEDAGN 619 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1271.2066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1271.2066.1 >prot_E-fasciculatus_F_contig1271.2066.1 ID=prot_E-fasciculatus_F_contig1271.2066.1|Name=mRNA_E-fasciculatus_F_contig1271.2066.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=629bp MSLREQLEKLVSQKLATKGELDHAGMLALETLSKMAPEGEVDPVGGPSAGback to top mRNA from alignment at E-fasciculatus_F_contig1271:9234..11120- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1271.2066.1 ID=mRNA_E-fasciculatus_F_contig1271.2066.1|Name=mRNA_E-fasciculatus_F_contig1271.2066.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1887bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1271:9234..11120- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1271:9234..11120- >mRNA_E-fasciculatus_F_contig1271.2066.1 ID=mRNA_E-fasciculatus_F_contig1271.2066.1|Name=mRNA_E-fasciculatus_F_contig1271.2066.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3774bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1271:9234..11120- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |