prot_E-fasciculatus_F_contig1270.2062.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1270.2062.1
Unique Name	prot_E-fasciculatus_F_contig1270.2062.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	440

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Match: A0A6H5KKN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN1_9PHAE)

HSP 1 Score: 637 bits (1643), Expect = 8.360e-227
Identity = 348/445 (78.20%), Postives = 368/445 (82.70%), Query Frame = 0

Query:    1 MAKVGA--GGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNGNISGN-DLIIEYNLDMTVDIGWREFTVTSIDEGVEEFGECLGELKQGQSYPLGDYQDNNASLAGLGMVASWGLGVLVAFYTFVALHRARNGLRRGGVSFKMLTKWCALFTVGVVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAEFCRNEDTEDQCNEATWSMDAPGWALSLGVTAMFAYAAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKARGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGHDEELGSVDEDDDEEVVYQNHQVHHAVI-NHSNPNPTQTQMVDDQGASRQQQQY--NRGYSRATSGASYVTGGGRSFDERSEGDYSETASSAQYYGGGQGGQSFMSSSSRGESFDEYR 439
            MAKVGA  G MYH A+FFLL TI+ GAAFIATSMSSRFFKWSVEGC+A GN  I G+ DLI+++NLDMTVDIGWREFTVTS+D+G E  GECLGELKQGQ+Y +GDYQDNNASLAGLGMVASW LGVLVA YTFVAL  AR+G RRGGVS KMLT WCALFTVG+VTATTVFWWL+EGKFGKRQESLAPRLFQRVEEGAE C N  TEDQCNEATWSMDAPGWALS+GVTAMFA+ AATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEK RGKDRRSAKTGVRAGGKAPSSTVQGG PADAGPDPMTYALEEG +++LGSVD                    NHSNPNPTQ  MV+D            NRGYSRATSG SY TGGGRSFDERSEGDYSETAS          GQSFMSSSSRGES DEYR
Sbjct:    1 MAKVGAIAGRMYHMALFFLLSTIVLGAAFIATSMSSRFFKWSVEGCSAFGNVAIPGSSDLIVDFNLDMTVDIGWREFTVTSLDQGTETMGECLGELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRRGGVSLKMLTNWCALFTVGLVTATTVFWWLIEGKFGKRQESLAPRLFQRVEEGAELCSNGSTEDQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKTRGKDRRSAKTGVRAGGKAPSSTVQGGDPADAGPDPMTYALEEGRNKQLGSVDXXXXXXXXXXXXXXXXXXXXNHSNPNPTQ--MVEDXXXXXXXXXXXLNRGYSRATSGGSYATGGGRSFDERSEGDYSETASXXXXXXXXXXGQSFMSSSSRGES-DEYR 442

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Match: D7G002_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G002_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 3.670e-221
Identity = 319/377 (84.62%), Postives = 340/377 (90.19%), Query Frame = 0

Query:    1 MAKVGA--GGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNGNISGN-DLIIEYNLDMTVDIGWREFTVTSIDEGVEEFGECLGELKQGQSYPLGDYQDNNASLAGLGMVASWGLGVLVAFYTFVALHRARNGLRRGGVSFKMLTKWCALFTVGVVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAEFCRNEDTEDQCNEATWSMDAPGWALSLGVTAMFAYAAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKARGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGHDEELGSVDEDDDEEVVYQNHQVHHAVINHSNPNPTQTQMVDDQGASRQQ 374
            MAKVGA  G MYH AMFFLL TI+ GAAFIATSMSSRFFKWSVEGCAA GNG++ G+ + II Y+LD+TVDIGWREFTVT++D+G E  GECL ELKQGQ+Y +GDYQDNNASLAGLGMVASW LGVLVA YTFVAL  AR+G RRGGVS KMLTKWCALFTVG+VTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGA+ C N  TEDQCNEATWSMDAPGWALS+GVTAMFA+ AATFLLWIIAPRVDHLNSGIEEIEV EPAKPPVGNIVMEKTPLPEEK RGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEG DEELGSVD+     VVYQNHQVHHAVINHSNPNPTQ  MVDDQGAS+++
Sbjct:    1 MAKVGAIAGSMYHMAMFFLLSTIVLGAAFIATSMSSRFFKWSVEGCAAFGNGDVPGSSERIIVYDLDVTVDIGWREFTVTTLDQGTETIGECLEELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRRGGVSLKMLTKWCALFTVGLVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAKLCSNSSTEDQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVAEPAKPPVGNIVMEKTPLPEEKTRGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGRDEELGSVDDXXXXXVVYQNHQVHHAVINHSNPNPTQ--MVDDQGASQRE 375

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KKN1_9PHAE	8.360e-227	78.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G002_ECTSI	3.670e-221	84.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..243
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 244..439
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 174..219
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..110
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 135..153
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 111..134
None	No IPR available	TMHMM	TMhelix		coord: 154..173
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	TMHMM	TMhelix		coord: 111..133
None	No IPR available	TMHMM	TMhelix		coord: 220..242

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1270	contig	E-fasciculatus_F_contig1270:8171..14728 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1270.2062.1	mRNA_E-fasciculatus_F_contig1270.2062.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1270 8171..17191 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1270.2062.1 ID=prot_E-fasciculatus_F_contig1270.2062.1|Name=mRNA_E-fasciculatus_F_contig1270.2062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=440bp
MAKVGAGGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNG
NISGNDLIIEYNLDMTVDIGWREFTVTSIDEGVEEFGECLGELKQGQSYP
LGDYQDNNASLAGLGMVASWGLGVLVAFYTFVALHRARNGLRRGGVSFKM
LTKWCALFTVGVVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAEFCR
NEDTEDQCNEATWSMDAPGWALSLGVTAMFAYAAATFLLWIIAPRVDHLN
SGIEEIEVVEPAKPPVGNIVMEKTPLPEEKARGKDRRSAKTGVRAGGKAP
SSTVQGGGPADAGPDPMTYALEEGHDEELGSVDEDDDEEVVYQNHQVHHA
VINHSNPNPTQTQMVDDQGASRQQQQYNRGYSRATSGASYVTGGGRSFDE
RSEGDYSETASSAQYYGGGQGGQSFMSSSSRGESFDEYR*