mRNA_E-fasciculatus_F_contig1270.2062.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Match: A0A6H5KKN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN1_9PHAE) HSP 1 Score: 637 bits (1644), Expect = 2.370e-225 Identity = 348/445 (78.20%), Postives = 368/445 (82.70%), Query Frame = 3
Query: 294 MAKVGA--GGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNGNISGN-DLIIEYNLDMTVDIGWREFTVTSIDEGVEEFGECLGELKQGQSYPLGDYQDNNASLAGLGMVASWGLGVLVAFYTFVALHRARNGLRRGGVSFKMLTKWCALFTVGVVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAEFCRNEDTEDQCNEATWSMDAPGWALSLGVTAMFAYAAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKARGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGHDEELGSVDEDDDEEVVYQNHQVHHAVI-NHSNPNPTQTQMVDDQGASRQQQQY--NRGYSRATSGASYVTGGGRSFDERSEGDYSETASSAQYYGGGQGGQSFMSSSSRGESFDEYR 1610
MAKVGA G MYH A+FFLL TI+ GAAFIATSMSSRFFKWSVEGC+A GN I G+ DLI+++NLDMTVDIGWREFTVTS+D+G E GECLGELKQGQ+Y +GDYQDNNASLAGLGMVASW LGVLVA YTFVAL AR+G RRGGVS KMLT WCALFTVG+VTATTVFWWL+EGKFGKRQESLAPRLFQRVEEGAE C N TEDQCNEATWSMDAPGWALS+GVTAMFA+ AATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEK RGKDRRSAKTGVRAGGKAPSSTVQGG PADAGPDPMTYALEEG +++LGSVD NHSNPNPTQ MV+D NRGYSRATSG SY TGGGRSFDERSEGDYSETAS GQSFMSSSSRGES DEYR
Sbjct: 1 MAKVGAIAGRMYHMALFFLLSTIVLGAAFIATSMSSRFFKWSVEGCSAFGNVAIPGSSDLIVDFNLDMTVDIGWREFTVTSLDQGTETMGECLGELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRRGGVSLKMLTNWCALFTVGLVTATTVFWWLIEGKFGKRQESLAPRLFQRVEEGAELCSNGSTEDQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKTRGKDRRSAKTGVRAGGKAPSSTVQGGDPADAGPDPMTYALEEGRNKQLGSVDXXXXXXXXXXXXXXXXXXXXNHSNPNPTQ--MVEDXXXXXXXXXXXLNRGYSRATSGGSYATGGGRSFDERSEGDYSETASXXXXXXXXXXGQSFMSSSSRGES-DEYR 442
BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Match: D7G002_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G002_ECTSI) HSP 1 Score: 621 bits (1602), Expect = 1.020e-219 Identity = 319/377 (84.62%), Postives = 340/377 (90.19%), Query Frame = 3
Query: 294 MAKVGA--GGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNGNISGN-DLIIEYNLDMTVDIGWREFTVTSIDEGVEEFGECLGELKQGQSYPLGDYQDNNASLAGLGMVASWGLGVLVAFYTFVALHRARNGLRRGGVSFKMLTKWCALFTVGVVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAEFCRNEDTEDQCNEATWSMDAPGWALSLGVTAMFAYAAATFLLWIIAPRVDHLNSGIEEIEVVEPAKPPVGNIVMEKTPLPEEKARGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGHDEELGSVDEDDDEEVVYQNHQVHHAVINHSNPNPTQTQMVDDQGASRQQ 1415
MAKVGA G MYH AMFFLL TI+ GAAFIATSMSSRFFKWSVEGCAA GNG++ G+ + II Y+LD+TVDIGWREFTVT++D+G E GECL ELKQGQ+Y +GDYQDNNASLAGLGMVASW LGVLVA YTFVAL AR+G RRGGVS KMLTKWCALFTVG+VTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGA+ C N TEDQCNEATWSMDAPGWALS+GVTAMFA+ AATFLLWIIAPRVDHLNSGIEEIEV EPAKPPVGNIVMEKTPLPEEK RGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEG DEELGSVD+ VVYQNHQVHHAVINHSNPNPTQ MVDDQGAS+++
Sbjct: 1 MAKVGAIAGSMYHMAMFFLLSTIVLGAAFIATSMSSRFFKWSVEGCAAFGNGDVPGSSERIIVYDLDVTVDIGWREFTVTTLDQGTETIGECLEELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRRGGVSLKMLTKWCALFTVGLVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAKLCSNSSTEDQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVAEPAKPPVGNIVMEKTPLPEEKTRGKDRRSAKTGVRAGGKAPSSTVQGGGPADAGPDPMTYALEEGRDEELGSVDDXXXXXVVYQNHQVHHAVINHSNPNPTQ--MVDDQGASQRE 375 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1270.2062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1270.2062.1 >prot_E-fasciculatus_F_contig1270.2062.1 ID=prot_E-fasciculatus_F_contig1270.2062.1|Name=mRNA_E-fasciculatus_F_contig1270.2062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=440bp MAKVGAGGMYHTAMFFLLCTIMFGAAFIATSMSSRFFKWSVEGCAARGNGback to top mRNA from alignment at E-fasciculatus_F_contig1270:8171..17191- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1270.2062.1 ID=mRNA_E-fasciculatus_F_contig1270.2062.1|Name=mRNA_E-fasciculatus_F_contig1270.2062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9021bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1270:8171..17191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1270:8171..17191- >mRNA_E-fasciculatus_F_contig1270.2062.1 ID=mRNA_E-fasciculatus_F_contig1270.2062.1|Name=mRNA_E-fasciculatus_F_contig1270.2062.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2640bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1270:8171..17191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |