prot_E-fasciculatus_F_contig12692.2054.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12692.2054.1
Unique Nameprot_E-fasciculatus_F_contig12692.2054.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length187
Homology
BLAST of mRNA_E-fasciculatus_F_contig12692.2054.1 vs. uniprot
Match: D7G4F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F1_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 7.080e-26
Identity = 86/197 (43.65%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    1 AVLFIADVDEKAMMVLKNVKGKWRLFWVLEAIGLSFFLAALAIKVTGNGTIVSRRE---SMLWRWDYGWYDEFDTWYFILFLHPISVTVFSLVVSSFVSTPVRRGPLSCV---DRSSRGLAFGCLMLCWLVVAI----ARVYVGVTVLFAEYVALGCSIPIALCSCRELRTHIINGSRRFRTTVHHRQRKYLLFGGL 187
            AVLFIADVDEKA  VLKNV GKWRLFWVLE IG+SF LA  ++K TGN   V+ RE   +    W  G   +  TW +I    P++VTV +L+++S VS P+   P+      DR  +   F  L LCW+ +        VY  V VLF   VAL     IA  S REL      G+ RF  T   R+R YL + G+
Sbjct:  193 AVLFIADVDEKAHTVLKNVSGKWRLFWVLEVIGMSFVLATFSVKATGNDGRVAGREPDRAACAAWTDGDDCDIFTWPYIFLELPLTVTVCALLITSEVSEPI--SPIHVRRFHDRPCQWSMFSLLALCWVSMPYFWRWTIVYALVIVLFVVVVAL----VIACRSFRELYRAFTRGAERFSATDK-RRRFYLFWAGM 382          
BLAST of mRNA_E-fasciculatus_F_contig12692.2054.1 vs. uniprot
Match: A0A6H5JP75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP75_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.500e-12
Identity = 72/196 (36.73%), Postives = 98/196 (50.00%), Query Frame = 0
Query:    1 AVLFIADVDEKAMMVLKNVKGKWRLFWVLEAIGLSFFLAALAIKVTGNGTIVSRRESMLWRWDY-GWYDEFD--TWYFILFLHPISVTVFSLVVSSFVSTPVRRGPLSCVDRSSRGLAFGCLM-LCWLVVA-----IARVYVGVTVLFAEYVALGCSIPIALCSCRELRTHIINGSRRFRTTVHHRQRKYLLFGGL 187
            AVLFIADVDEKA  VLKN  GK RL WVLE IG+SF LA  ++K T N   V+ +++  ++ D  GW ++    TW +I F  P++VTV                      R +  +    L+ LCW+ +      I  + V + VLF   VA    + IA  S REL      G+ RF T    R+R YL + G+
Sbjct:  179 AVLFIADVDEKAHTVLKNFSGKSRLCWVLEIIGMSFVLATFSLKATDNYGRVAGKDA--YKSDCAGWGNDCGIFTWQYIFFELPLTVTV---------------------SRPTLAMEHVLLLALCWVSMPYFFRWIILLAVAI-VLFVVVVA----VVIARRSFRELYRAFTQGAERF-TATDKRRRFYLFWAGI 345          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12692.2054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4F1_ECTSI7.080e-2643.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP75_9PHAE4.500e-1236.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..187
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12692contigE-fasciculatus_F_contig12692:3098..3910 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12692.2054.1mRNA_E-fasciculatus_F_contig12692.2054.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12692 3098..3910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12692.2054.1 ID=prot_E-fasciculatus_F_contig12692.2054.1|Name=mRNA_E-fasciculatus_F_contig12692.2054.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=187bp
AVLFIADVDEKAMMVLKNVKGKWRLFWVLEAIGLSFFLAALAIKVTGNGT
IVSRRESMLWRWDYGWYDEFDTWYFILFLHPISVTVFSLVVSSFVSTPVR
RGPLSCVDRSSRGLAFGCLMLCWLVVAIARVYVGVTVLFAEYVALGCSIP
IALCSCRELRTHIINGSRRFRTTVHHRQRKYLLFGGL
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