mRNA_E-fasciculatus_F_contig1268.2047.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1268.2047.1 vs. uniprot
Match: D8LQN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN1_ECTSI) HSP 1 Score: 1494 bits (3869), Expect = 0.000e+0 Identity = 836/944 (88.56%), Postives = 861/944 (91.21%), Query Frame = 1
Query: 31 DDGPESLEDGLEIPGFPKPSKPEGFTGSLQGHLEKLSSNARSIHHVLETLCGGLDRLEKKMDTNSSQVEARLANIVHHISGEADEDTMSAWSSLAGGXXXXAGSPTELGTAPSLRRRGSFGMQMAPCSEDPPFDFRNDKISLDEELANVGRGGDESKDVVTSFGGVVERAKDVAIKNEGGGRGEVEPAEKITVPRNSSSAQATLQPTVVAAEPSASETPDNTDEHQNPSEAKDLSSVSSPTDAGSPREEDRELPAGLVSGGEDTNDLYPQRRRSNQDDQSDGSNSKLNSARAEEGGNDIMVVSKQASSVDGESVLGEEAEGLGEGNDFVKTPFSPQPSIDSGVLDSRLVARQRWIWAFGRICQLVRRRKRKQFEIMSQRATDRTVRMGSRVSVVEKRLDETTRHLLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLGTEEKFNGIVHATKKMMEEKFKSDMTELETRLASGRRELETSLETEIRRNGAKLEDMDDRYARSEEALHRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHQRRLSELRVQLESGKPAAGGAVPIETEPEETGGERMARLLKAAGTATEFLAEDLDKIFESNGGNAGDATAIAADNAEANHELDQVQSARSSDSNIDDPLQELRHVSVNAVECSRLCNEVANTSGQAERDGLGPDGGGAGGNYNVDAAVRGAEALCGRIQNLLSAHDKNIGSSKNKTELPATGEIERQGSLEGNGGVGLKLDDIVCPNGRKDLVQRLTAARDALLPVIGERSSVGSLRVALLGLTASVRANLEEKQARDLMEERWNDLRGRVSGLDTSVSDIKDSLHDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARAMAAVGALSPRTGAGDTAGQGGDPSRPRSAPLAKYDKENNNPETAGREESDLDAS--QANSR 2856
DDGPESLEDGLEIPGFPKPSKPEGFTG+LQGHLEKLSSNARSIHHVLETLCGGLDRLEKKMDTNSSQVEARLANIVHHISGEADEDTMSAWSS+AGGXXXXAGSPT+LGTAPSLRRRGSFGMQMA CSED PFDFRNDKISLDEELANVGR GDES+DVVTSFGGVVERAKDVA++NEGGGRGEVE A +T P NSSSAQATL+PTVVAA PSASET +NTDEHQNPSEAKDLSS+SSPTD GSPREEDRELP GLVSGGEDTNDL+PQRRRSNQDDQSDGSNSKLNSARAEEG ND+MVVSKQ SSV GESVLGEEAE GEGNDFVKT FSPQ SIDSGVLDSRL+ARQRWIWAFGRICQLVRRRKRKQFEIMSQRATDRTVRMGSRVSVVEKRLDETT HLLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLG EEKFNGIVHATKKM+EEKFKSDMTELETRLASG R EIRRNG KLEDMDDRYARSEEAL RAE XXXXXXXXXXXXXXXXXXXX KAHQRRLSELRVQLESG PAAGGAVPIETEPEET ERMARLLK AGTATEFLAEDLDKI +SNGGNAGDATA AADNAEANHEL QV SARSS SN+D LQELRHVSVNAVECSRLCN+VA+ SGQAERD +GPDGGGAG + NVDAAVR EALCG IQ+LLS DKNI SSKNK EL ATGEIERQGSLEGNGGVGLK+DDIVCPNGRKDLVQRLTAARDALLPVIGERSSVGSLRVA LGLTASVRANLEEKQARDLMEERWNDLRGRVSGLDTSVSDIKDSLHDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARAMAAVGA+SPRTGAG T G GGDPSRPRSAP YDKEN+NPETAG+EE DLDAS QANSR
Sbjct: 39 DDGPESLEDGLEIPGFPKPSKPEGFTGNLQGHLEKLSSNARSIHHVLETLCGGLDRLEKKMDTNSSQVEARLANIVHHISGEADEDTMSAWSSIAGGXXXXAGSPTDLGTAPSLRRRGSFGMQMASCSEDSPFDFRNDKISLDEELANVGRDGDESEDVVTSFGGVVERAKDVALQNEGGGRGEVERAAILTAPGNSSSAQATLKPTVVAAGPSASETLENTDEHQNPSEAKDLSSISSPTDTGSPREEDRELPTGLVSGGEDTNDLHPQRRRSNQDDQSDGSNSKLNSARAEEGRNDVMVVSKQESSVGGESVLGEEAEVPGEGNDFVKTAFSPQASIDSGVLDSRLIARQRWIWAFGRICQLVRRRKRKQFEIMSQRATDRTVRMGSRVSVVEKRLDETTEHLLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLGMEEKFNGIVHATKKMVEEKFKSDMTELETRLASGHRXXXXXXXXEIRRNGTKLEDMDDRYARSEEALRRAEERIGEXXXXXXXXXXXXXXXXXXXXVDEDRLGSLENLKKAHQRRLSELRVQLESGTPAAGGAVPIETEPEETDAERMARLLKTAGTATEFLAEDLDKILDSNGGNAGDATATAADNAEANHELGQVLSARSSASNVDHALQELRHVSVNAVECSRLCNDVASASGQAERDEIGPDGGGAGSDSNVDAAVRRVEALCGHIQDLLSTQDKNISSSKNKAELSATGEIERQGSLEGNGGVGLKIDDIVCPNGRKDLVQRLTAARDALLPVIGERSSVGSLRVAFLGLTASVRANLEEKQARDLMEERWNDLRGRVSGLDTSVSDIKDSLHDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARAMAAVGAMSPRTGAGVTEGHGGDPSRPRSAPPTNYDKENHNPETAGQEEGDLDASPSQANSR 982
BLAST of mRNA_E-fasciculatus_F_contig1268.2047.1 vs. uniprot
Match: A0A6H5LPN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPN1_9PHAE) HSP 1 Score: 1381 bits (3575), Expect = 0.000e+0 Identity = 814/970 (83.92%), Postives = 846/970 (87.22%), Query Frame = 1
Query: 1 MSFSVSRFATDDGPESLEDGLEIPGFPKPSKPEGFTGSLQGHLEKLSSNARSIHHVLETLCGGLDRLEKKMDTNSSQVEARLANIVHHISGEADEDTMSAWSSLAGGXXXXAGSPTELGTAPSLRRRGSFGMQMAPCSEDPPFDFRNDKISLDEELANVGRGGDESKDVVTSFGGVVERAKDVAIKNEGGGRGEVEPAEKITVPRNSSSAQATLQPTVVAAEPSASETPDNTDEHQNPSEAKDLSSVSSPTDAGSPREEDRELPAGLVSGGEDTNDLYPQRRRSNQDDQSDGSNSKLNSARAEEGGNDIMVVSKQASSVDG----------------ESVLGEEAEGLGEGNDFVKTPFSPQPSIDSGVLDSRLVARQRWIWAFGRICQLVRRRKRKQFEIMSQRATDRTVRMGSRVSVVEKRLDETTRHLLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLGTEEKFNGIVHATKKMMEEKFKSDMTELETRLASGRRELETSLETEIRRNGAKLEDMDDRYARSEEALHRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAHQRRLSELRVQLESGKPAAGGAVPIETEPEETGGERMARLLKAAGTATEFLAEDLDKIFESNGGNAGDATAIAADNAEANHELDQVQSARSSDSNIDDPLQELRHVSVNAVECSRLCNEVANTSGQAERDGLGPDGGGAGGNYNVDAAVRGAEALCGRIQNLLSAHDKNIGSSKNKTELPATGEIERQGSLEGNGGVGLKLDDIVCPNGRKDLVQRLTAARDALLPVIGERSSVGSLRVALLGLTASVRANLEEKQARDLMEERWNDLRGRVSGLDTSVSDIKDSLHDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARAMAAVGALSPRTGAGDTAGQGGDPSRPRSAPLAKYDKENNNPETAGREESDLDAS--QANSR 2856
MSFSVSRFATDDGPESLEDGLEIPGFPKPSKP GF G+LQ HLEKLSSNA SIHHVLETLCGGLDRLEKK+DTNSSQVEARLANIVHHISGEADEDTMSAWSSLAGGXXXXAGSPTELGT PSLRRRGSFGMQMA C EDPPFDFRNDKISLDEELA VGRGGDES+DVVTSF GVVERAKDV++KNEGG RGEVE A + P NSSSAQATL+ TVVA PSASET + T EHQNPSEAK LSS+ SPT+AGSPREEDR+LP GLVSGGEDTNDL+P RRRSNQDDQSDGSNSKLNSARAEEG ND+MVVSKQASSV ESVLGEEAEG GEGNDFVKT FSPQ SIDSGVLDSR QRWIWAFGRICQLVRRRKRKQFEIMSQRATDR VRMGSRVSVVEKRLDETT LLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLG EEK NGIVHATKK+MEEKFKSDMTELETR+ KLEDMDDRYARSEEAL RAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELRVQLESG PAAGGAVPIETEPEETG +RMARLLK A TATEFLAEDLDKI ++NGGNAGDATA AA NAEANHEL QVQSARSSDSNID LQELRHVS++AVECSRLCN+VAN SGQAE D +GPDGGGAG ++NVDAAV AEALCGRIQ+LLSAH+KNI S+K K EL AT EIERQGSLEGNGG+GLKLDDIVC NGRKDLVQRLTAARDALLPVIGERSSVGSLRV LLGLTASVRANLEEKQAR LMEERWNDLRGRVS L+TSVSDIKDSL DEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNAR MAAVGALSPRTGAG GQGGDPSRPRS P YDKEN+NPETAG+ E DL+AS QANSR
Sbjct: 1 MSFSVSRFATDDGPESLEDGLEIPGFPKPSKPGGFMGNLQEHLEKLSSNASSIHHVLETLCGGLDRLEKKVDTNSSQVEARLANIVHHISGEADEDTMSAWSSLAGGXXXXAGSPTELGTVPSLRRRGSFGMQMASCGEDPPFDFRNDKISLDEELAKVGRGGDESEDVVTSFEGVVERAKDVSLKNEGGRRGEVERAAILNTPGNSSSAQATLKTTVVATRPSASETLEKTVEHQNPSEAKYLSSIWSPTNAGSPREEDRDLPTGLVSGGEDTNDLHPPRRRSNQDDQSDGSNSKLNSARAEEGRNDVMVVSKQASSVXXXXXXXXXXXXXXXXXXESVLGEEAEGPGEGNDFVKTAFSPQASIDSGVLDSR----QRWIWAFGRICQLVRRRKRKQFEIMSQRATDRAVRMGSRVSVVEKRLDETTEQLLVVNQLRDKSGSHTAQIKNLNEMVKELCKLLGMEEKINGIVHATKKLMEEKFKSDMTELETRIXXXXXXXXXXXXXXXXXXXXKLEDMDDRYARSEEALRRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRVQLESGTPAAGGAVPIETEPEETGEDRMARLLKTASTATEFLAEDLDKILDNNGGNAGDATATAAGNAEANHELGQVQSARSSDSNIDHALQELRHVSIDAVECSRLCNDVANASGQAEGDEIGPDGGGAGSDHNVDAAVCRAEALCGRIQDLLSAHEKNISSNKKKAELSATFEIERQGSLEGNGGMGLKLDDIVCSNGRKDLVQRLTAARDALLPVIGERSSVGSLRVTLLGLTASVRANLEEKQARKLMEERWNDLRGRVSELNTSVSDIKDSLLDEGHHRYGSLDMDSDNGEDLEERLGCKADVSWVQRELQRLWDALNARTMAAVGALSPRTGAGVREGQGGDPSRPRSTPSTDYDKENHNPETAGQAEGDLEASPSQANSR 966 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1268.2047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1268.2047.1 >prot_E-fasciculatus_F_contig1268.2047.1 ID=prot_E-fasciculatus_F_contig1268.2047.1|Name=mRNA_E-fasciculatus_F_contig1268.2047.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=952bp MSFSVSRFATDDGPESLEDGLEIPGFPKPSKPEGFTGSLQGHLEKLSSNAback to top mRNA from alignment at E-fasciculatus_F_contig1268:12346..19044+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1268.2047.1 ID=mRNA_E-fasciculatus_F_contig1268.2047.1|Name=mRNA_E-fasciculatus_F_contig1268.2047.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6699bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1268:12346..19044+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1268:12346..19044+ >mRNA_E-fasciculatus_F_contig1268.2047.1 ID=mRNA_E-fasciculatus_F_contig1268.2047.1|Name=mRNA_E-fasciculatus_F_contig1268.2047.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5712bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1268:12346..19044+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |