prot_E-fasciculatus_F_contig1268.2045.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1268.2045.1
Unique Nameprot_E-fasciculatus_F_contig1268.2045.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length333
Homology
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 4.200e-156
Identity = 261/334 (78.14%), Postives = 272/334 (81.44%), Query Frame = 0
Query:    1 MAGRGRGGRFGGWGGNSRGSGKSVASGRGGGDAAAPSRALNTADCCACASNAPLLIELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGRFTARRMLRGLPPAGPEPDDSRCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKSAATSSV--AGYSSRLPSDTNSLLRMNLRVGSGATSSTAGGRPLSLASNFAALRDGGGETTPDVTPKRPTSRARREEAAAGGETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARRRDDPTSEVLLGYIVERKTASDLASSIIDGR 332
            MAGRGRGGRFGG  GNS G  K VASGRGG DA+A +R LNTADCCAC SN PLL+ELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVG FTARRMLRGLPPAGPEP++S                                   S KS  TSSV  A   SRLPSDTNSLLRMNLRVGS AT++T GGRPLSLASNFAALR GG ETTPDVTPKRPTSRAR+EEA+  GET RSSKAPSFFSGQWEAWL+VDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIAR+RDDPTSEVLLGYIVERKTASDLASSIIDGR
Sbjct:    1 MAGRGRGGRFGGQDGNSHG--KIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSS--------GVRRTDEENIEPSGSSSSRGGGARKSSNKSTGTSSVTNADAGSRLPSDTNSLLRMNLRVGSSATTTT-GGRPLSLASNFAALRGGGEETTPDVTPKRPTSRARKEEAS--GETARSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGR 321          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.960e-17
Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  253 SFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARRRDDPT----SEVLLGYIVERKTASDLASSIIDGR 332
            SF  G W   LI D RE    + Q+++L   + CE R LPLGDMLW+AR  D  +     EVLLGYIVERKTASDL SS++DGR
Sbjct:    7 SFAGGIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGR 90          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.270e-12
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 0
Query:  243 GETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIAR-RRDDPTSEVLLGYIVERKTASDLASSIIDGR 332
            GE    S+ P          L+ D+RE    +VQS LLQ+G+ CE R L LGDM+WIA+ RR D   E +L +I+ERK+A+DLA SIIDGR
Sbjct:  418 GERRPDSRCPPVPFEDLSVILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSDV--EYVLDFIIERKSAADLAESIIDGR 506          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A654I5F0_9CEST (ERCC4 domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654I5F0_9CEST)

HSP 1 Score: 75.1 bits (183), Expect = 1.590e-11
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0
Query:  223 PDVTPKRPTSRARREEAAAGGETVRSSKA--PSFFSGQWEAWLIVDNREHEFMSVQSSLLQK-----GIRCETRQLPLGDMLWIARRRDD-----PTSEVLLGYIVERKTASDLASSIIDGR 332
            P +T  RPT+ +      + G  V  S    P F  G++E  L+VD RE+  ++    +L+       I CE R LP+GD +W+AR   D     P  EV++G ++ERK A DLASSI+DGR
Sbjct:   44 PCLTSVRPTASS----TISSGVKVNPSTEDIPRFPGGKYELLLLVDTRENFGLNKMKEMLRSDLSGVSIGCEVRSLPVGDFVWVARPLSDMSALTPFKEVVIGIVIERKRADDLASSIVDGR 161          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A367J7A8_RHIST (Crossover junction endonuclease mus81 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J7A8_RHIST)

HSP 1 Score: 75.9 bits (185), Expect = 2.080e-11
Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  255 FSGQWEAWLIVDNREHEFMS----VQSSLLQKGIRCETRQLPLGDMLWIARRRDDPTSEVLLGYIVERKTASDLASSIIDGR 332
            F  +++  L+VD+RE +        + +L  KGI+C TR + LGD++WIAR+++ P+ E+ L Y+VERK   DL SSI DGR
Sbjct:  556 FPHEYDIVLVVDSREIQMKGNRDYFEKNLTAKGIQCITRSMDLGDVIWIARKKESPSEELFLDYVVERKRLDDLVSSIKDGR 637          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A8H7SI57_9FUNG (ERCC4 domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SI57_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 2.220e-11
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0
Query:  244 ETVRSSKAPSFFSGQWEAWLIVDNREHEFMS----VQSSLLQKGIRCETRQLPLGDMLWIARRRDDP--TSEVLLGYIVERKTASDLASSIIDGR 332
            + V S +  S   G++E  LI+DNRE +  +     Q  L +KG+RC TR L +GD++W+AR+R+      E+ L YIVERK   DL SSI DGR
Sbjct:  780 QLVDSLQLESISPGEYEIVLILDNREIQMKNSRTYFQRKLAEKGVRCITRALDVGDVIWVARKRNSTGEDQELFLDYIVERKRLDDLVSSIKDGR 874          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A7M3QYZ8_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QYZ8_SPIER)

HSP 1 Score: 74.3 bits (181), Expect = 5.100e-11
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0
Query:  252 PSFFSGQWEAWLIVDNREHEFMS-----VQSSLLQKGIRCETRQLPLGDMLWIARRRDD-----PTSEVLLGYIVERKTASDLASSIIDGR 332
            P F  G +E  L+VD RE+  ++     ++S L    I CE R LP+GD +W+AR   D     P  EV+LG ++ERK A DLASSI+DGR
Sbjct:  237 PRFSGGAYELVLLVDIRENFGLNKMKEMLRSDLSSVSIGCEVRSLPVGDFVWVARPLSDMNALTPFKEVVLGIVIERKRADDLASSIVDGR 327          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A7D8ZYD3_9TREE (ERCC4 domain-containing protein n=1 Tax=Vanrija humicola TaxID=5417 RepID=A0A7D8ZYD3_9TREE)

HSP 1 Score: 73.6 bits (179), Expect = 9.780e-11
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  251 APSFFSGQWEAWLIVDNREHEFMS----VQSSLLQKGIRCETRQLPLGDMLWIARRRDDP---TSEVLLGYIVERKTASDLASSIIDGR 332
            A +F  G +E  LI+D RE E  S    + ++L  KG++ ETR L +GDM W+ARRRD       E +L ++VERK   DL SSIIDGR
Sbjct:  183 AITFPHGSYEVVLILDTREVESRSNRDKIATALSAKGVKVETRALRMGDMCWVARRRDGTGGEEDECVLDFVVERKRLDDLCSSIIDGR 271          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: A0A5K3FE98_MESCO (ERCC4 domain-containing protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FE98_MESCO)

HSP 1 Score: 70.5 bits (171), Expect = 4.930e-10
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 0
Query:  245 TVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQK-GIRCETRQLPLGDMLWIARRRDDPTS--EVLLGYIVERKTASDLASSIIDGR 332
            T   + +  F  G +   L+VD RE   M+    LL    +  E R LP+GD  WIAR  + PTS  EV+LG IVERK A DLASSI+DGR
Sbjct:   40 TQDDTPSTHFPGGSYTITLLVDVRETFGMNRLKDLLNAHAVSWEARSLPVGDFAWIARSAEGPTSAEEVVLGVIVERKRADDLASSIVDGR 130          
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Match: R7SDE4_TREMS (ERCC4 domain-containing protein n=2 Tax=Tremella mesenterica TaxID=5217 RepID=R7SDE4_TREMS)

HSP 1 Score: 71.6 bits (174), Expect = 5.000e-10
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  251 APSFFSGQWEAWLIVDNREHEFMSVQS----SLLQKGIRCETRQLPLGDMLWIARRRDD---PTSEVLLGYIVERKTASDLASSIIDGR 332
            A +F +G ++  LI+D RE E  + +     +L++KGI  E R L LGDMLWIARRRD       E +L Y+VERK   DL SSI DGR
Sbjct:  479 AITFPAGSYDIVLILDTREVESKTRRDEFAEALIKKGINVEQRALRLGDMLWIARRRDGWGGEADECVLDYVVERKRLDDLCSSIKDGR 567          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1268.2045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE4.200e-15678.14ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA5.960e-1754.76Restriction endonuclease type II-like protein n=1 ... [more]
A0A7R9UCP7_9STRA3.270e-1249.45Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A654I5F0_9CEST1.590e-1138.52ERCC4 domain-containing protein n=1 Tax=Sparganum ... [more]
A0A367J7A8_RHIST2.080e-1143.90Crossover junction endonuclease mus81 (Fragment) n... [more]
A0A8H7SI57_9FUNG2.220e-1144.21ERCC4 domain-containing protein n=1 Tax=Thamnidium... [more]
A0A7M3QYZ8_SPIER5.100e-1145.05Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A7D8ZYD3_9TREE9.780e-1147.19ERCC4 domain-containing protein n=1 Tax=Vanrija hu... [more]
A0A5K3FE98_MESCO4.930e-1047.25ERCC4 domain-containing protein n=2 Tax=Mesocestoi... [more]
R7SDE4_TREMS5.000e-1048.31ERCC4 domain-containing protein n=2 Tax=Tremella m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 265..332
e-value: 6.0E-10
score: 39.5
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 51..115
e-value: 5.0E-7
score: 31.8
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 74..111
NoneNo IPR availableGENE3D3.40.50.10130coord: 288..332
e-value: 2.6E-14
score: 55.5
NoneNo IPR availablePANTHERPTHR13451:SF0CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 51..163
coord: 231..332
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 51..163
coord: 231..332
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 259..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1268contigE-fasciculatus_F_contig1268:475..3316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1268.2045.1mRNA_E-fasciculatus_F_contig1268.2045.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1268 475..3316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1268.2045.1 ID=prot_E-fasciculatus_F_contig1268.2045.1|Name=mRNA_E-fasciculatus_F_contig1268.2045.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=333bp
MAGRGRGGRFGGWGGNSRGSGKSVASGRGGGDAAAPSRALNTADCCACAS
NAPLLIELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACAL
EGVGRFTARRMLRGLPPAGPEPDDSRCCRRTDEENIEPSGSSSSRGGGGG
GGGAGGARKGSTKSAATSSVAGYSSRLPSDTNSLLRMNLRVGSGATSSTA
GGRPLSLASNFAALRDGGGETTPDVTPKRPTSRARREEAAAGGETVRSSK
APSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIA
RRRDDPTSEVLLGYIVERKTASDLASSIIDGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR006166ERCC4_domain