mRNA_E-fasciculatus_F_contig12670.2041.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12670.2041.1 vs. uniprot
Match: A0A6H5KXT3_9PHAE (CAP-Gly domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXT3_9PHAE) HSP 1 Score: 268 bits (684), Expect = 6.230e-87 Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 1
Query: 28 TQLTRRGSHASLVSENVGGSGVPSSAWAPGSESGSARKALDKGKRTGSGDDPIIGQILASETFSRILSETVAERVKAEVARKEVHMKADSEAMLSRMSHVERVVEDAGGAMDDIASMVQTISESVEGRPADLDLKGAAAXXXXXXXXXXXXXRDDARVAELTKLLCTVHDMSSQ 549
TQLTRRGSHASL+SENVGGSG+PS+ WAPGSESG+ARKALDKGKRTGSGDDP+IGQILASE F RILS+TVAERVK E+ARKE MKADSEAMLSRMSHVERVVEDAGGAMDDIASMVQTISES+EGRPADLD KGAAA XXXXXXX RDDARVAELTKLLCTVHDMSSQ
Sbjct: 130 TQLTRRGSHASLLSENVGGSGLPSNTWAPGSESGNARKALDKGKRTGSGDDPMIGQILASEAFFRILSDTVAERVKTEMARKEFQMKADSEAMLSRMSHVERVVEDAGGAMDDIASMVQTISESIEGRPADLDFKGAAAGGVGXXXXXXXG-RDDARVAELTKLLCTVHDMSSQ 302 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12670.2041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12670.2041.1 >prot_E-fasciculatus_F_contig12670.2041.1 ID=prot_E-fasciculatus_F_contig12670.2041.1|Name=mRNA_E-fasciculatus_F_contig12670.2041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=183bp PHPHQPLLETQLTRRGSHASLVSENVGGSGVPSSAWAPGSESGSARKALDback to top mRNA from alignment at E-fasciculatus_F_contig12670:387..3870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12670.2041.1 ID=mRNA_E-fasciculatus_F_contig12670.2041.1|Name=mRNA_E-fasciculatus_F_contig12670.2041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3484bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12670:387..3870- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12670:387..3870- >mRNA_E-fasciculatus_F_contig12670.2041.1 ID=mRNA_E-fasciculatus_F_contig12670.2041.1|Name=mRNA_E-fasciculatus_F_contig12670.2041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1098bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12670:387..3870- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |