mRNA_E-fasciculatus_F_contig12667.2036.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: D8LRL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL4_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 1.270e-139 Identity = 217/261 (83.14%), Postives = 221/261 (84.67%), Query Frame = 1
Query: 1 LTQRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARR-PAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGEPGKEVEPEVAENAHEAS 780
L + P ACP VPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSS V L GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER DGGGLFD ILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRE IAARR AAAE SRRLVCSDVAVIDTGKGNIREVLRVSW EP + EP V E+A A+
Sbjct: 112 LLRVVPSAKACPGVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSCPVGLDGGSGGDASVGSGT--GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER-DGGGLFDLILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFREVIAARRCSAAAEASRRLVCSDVAVIDTGKGNIREVLRVSWEEPEEGAEPGVTESARVAA 369
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A6H5JBA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA0_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 7.470e-139 Identity = 215/255 (84.31%), Postives = 218/255 (85.49%), Query Frame = 1
Query: 7 QRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAAR-RPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGEPGKEVEPEVAENA 768
QRT A CPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSS + L GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER DGGGLFD ILTAETLYTTAVADKVLDMV RHLAPGGQALVASKRFYFGTGGSTQYFRE+IAAR AA E SRRLVCSD AVIDTGKGNIREVLRVSW EP + EP VAENA
Sbjct: 87 QRT---ATCPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSSPMGLDGGSGEDGSVGSGT--GRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEER-DGGGLFDLILTAETLYTTAVADKVLDMVGRHLAPGGQALVASKRFYFGTGGSTQYFREAIAARCNSAAVEASRRLVCSDAAVIDTGKGNIREVLRVSWEEPEEGAEPGVAENA 335
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A835Z957_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z957_9STRA) HSP 1 Score: 184 bits (466), Expect = 4.290e-53 Identity = 110/258 (42.64%), Postives = 138/258 (53.49%), Query Frame = 1
Query: 40 VPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNV-EAHHWPL----------------------------AEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWG 726
V EE+DLVPG+YEGGLKVWE S+DL+E++L + + K V+ELGCGHG PG+ AL+QG V F+D+NREV+E TIPNVR N EA L A +Y GDW L +L + DG FD ILTAETLYT ++ ++ LAPGG ALVA+KR+YFG GGS +F++ +A + C VIDTG NIREVL VSWG
Sbjct: 62 VDEETDLVPGVYEGGLKVWECSVDLIEYMLDRPEVYGPEKMAG----------------KRVIELGCGHGLPGVYALRQGAHVVFTDYNREVLEHATIPNVRANCPEALPSSLSIDTSGGRGGGMSAGQGSAQGVVNAGGRAAFYFGDWGGLPEMLAD--DGEERFDLILTAETLYTATATVQIHRLIETLLAPGGHALVAAKRYYFGCGGSCAHFKQLVAPP----------MACETACVIDTGVANIREVLLVSWG 291
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A485L4J9_9STRA (Aste57867_15473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4J9_9STRA) HSP 1 Score: 164 bits (415), Expect = 8.010e-46 Identity = 99/232 (42.67%), Postives = 136/232 (58.62%), Query Frame = 1
Query: 52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPL-----AEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSWGE 729
SD+ G+YEGG K+WE ++DL+++L+ ++SSF + V+ELGCGHG PGI AL QG V FSD+N+EVIE TIPNV N P+ A YYSGDW +S L+ +G LFD ILTAET+YT +VA + + RHL GG ALVA+K +YFGTGGS +F++ I R + R LV V + + N+RE++RV++ +
Sbjct: 84 SDIQTGVYEGGFKLWEGAVDLIQYLMRHASSFPMASQADYR----------------VMELGCGHGLPGIYALLQGAAEVYFSDYNKEVIELATIPNVLRNAS----PIVAAAKARYYSGDWQLVSDLMHTQGVPP-LFDLILTAETIYTESVAITLAQTIVRHLKRGGVALVAAKTYYFGTGGSVHHFKQLIDDVRST--DGRRLLVAETVWDSNDARSNMREIVRVTYAD 292
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A7S3HG77_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG77_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.620e-44 Identity = 98/226 (43.36%), Postives = 124/226 (54.87%), Query Frame = 1
Query: 46 EESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVS 720
+E+D++PG+YEGG KVWE S+DL LL + + +L +ELGCGHGFPG+ AL+ G RV FSD N EVI VT PN+ LN AE YSGDW LS + RG G FD IL+AETLYT A +K+L M+ RHL+ G AL+ASKRFYFG GG T + A V + V G NIRE++R++
Sbjct: 76 KETDIIPGVYEGGYKVWECSVDLTAMLLQKACTLP-ELSTCR-----------------AIELGCGHGFPGVAALKLGCPRVVFSDLNAEVINAVTWPNIFLNAR-DIMNRAECYSGDWDELSSTVLSRGSDDGKFDLILSAETLYTEASCNKILSMILRHLSNTGVALIASKRFYFGVGGGTYTLETLVQACGVLNYHVEQ--------VYQDGASNIREIVRLT 274
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A1V9YGQ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGQ4_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.230e-44 Identity = 94/225 (41.78%), Postives = 130/225 (57.78%), Query Frame = 1
Query: 52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
SDL G+YEGG K+WE S+DL+E+L ++ +F + R V+ELGCGHG PGI ALQQG V FSD+N EVI+ TIPN + V + H A +YSGDW +S + + +D ILTAETLYT V +L+ + RHL P G ALVA+K +YFGTGGS + + IAA + +V + V + + NIRE+++V++
Sbjct: 77 SDLETGVYEGGFKLWECSVDLIEYLEAHKEAFGIGT-----------------RSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPNAQ-RVASAHLNRATFYSGDWGHMSAAMTAANEDTE-YDLILTAETLYTEEVTIALLETIKRHLKPSGVALVAAKTYYFGTGGSVHHLKSLIAA--------TGTMVATTVWNGNDCRSNIREIVQVTY 274
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A024UPA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPA8_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.740e-42 Identity = 92/226 (40.71%), Postives = 128/226 (56.64%), Query Frame = 1
Query: 52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAP-GGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
SD+ G+YEGG K+WE ++DL+++L +N+ + V VLELGCGHG PG+ ALQQG V FSD+N EVIE TIPN++ N A+ A +YSGDW +S + G FD ILTAET+YT +V+ ++ + RHL GG ALVA+K +YFGTGGS +F+ +A +V V + K N+RE++ VS+
Sbjct: 85 SDIQTGVYEGGFKLWECAVDLIQYLAANAPNLPVHNGWR------------------VLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANANDLTKATFYSGDWQLMSEDMLAHGTDME-FDLILTAETIYTESVSVELFQTIQRHLKRRGGIALVAAKSYYFGTGGSVHHFKSLVAQ--------DGTMVARTVWESNDAKSNVREIVHVSY 283
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: T0R0A7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0A7_SAPDV) HSP 1 Score: 155 bits (391), Expect = 1.840e-42 Identity = 92/226 (40.71%), Postives = 126/226 (55.75%), Query Frame = 1
Query: 55 DLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGV-RVCFSDFNREVIEQVTIPNVR--LNVEAHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
DL G+YEGG K+WE S+DL+E+L + + F + V+ELGCGHG PGI ALQQG V FSD+N EVIE TIPN HH A +YSGDW+++S + D +D +LTAETLYT V +L M+ RHL G ALVA+K +YFGTGGS +F++ +A +V + V + + NIRE+++V++
Sbjct: 77 DLETGVYEGGFKLWECSIDLIEYLQQHQADFPIGACGLR-----------------VMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPNTMRCAGDRLHH---ASFYSGDWANVSEAMAANEDAS--YDLVLTAETLYTEDVTISLLAMIKRHLKRSGVALVAAKTYYFGTGGSVHHFKDLVAREGD--------MVATTVWNGNDCRSNIREIVQVTY 272
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: A0A8J4B1M0_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1M0_9CHLO) HSP 1 Score: 154 bits (389), Expect = 8.120e-42 Identity = 96/230 (41.74%), Postives = 128/230 (55.65%), Query Frame = 1
Query: 52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVE----AHHWPLAEYYSGDWSSLSPLLEERGDGGGLFDFILTAETLYTTAVADKVLDMVARHLAPG-GQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDT-GKGNIREVLRVSW 723
SDLVPG YEGG K+WE SLDL + LLS S S + K VLELGCGHG PGI+AL G V F D+N EV+ ++TIPNV N+E + P Y+SGDW + L RG GG +D IL++ET+Y+ +++L+ + + L P G AL+A+KR+YFG GG T+ FR + E S VA +D GN+REVL + +
Sbjct: 82 SDLVPGKYEGGFKLWECSLDLCKTLLSRYSVASERVLTDSEFSTELHG-------KRVLELGCGHGLPGILALVSGAEVHFQDYNHEVLRRLTIPNVIANMERLPRSRPRPATRYFSGDWRLVGEHLTSRGYGGH-YDLILSSETIYSVPAQERLLECIKQLLQPPHGVALIAAKRYYFGVGGGTKSFRNLV--------EEDGIFEVSVVAQVDDKASGNVREVLMLKF 295
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Match: M4BGT3_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGT3_HYAAE) HSP 1 Score: 153 bits (386), Expect = 1.510e-41 Identity = 95/230 (41.30%), Postives = 131/230 (56.96%), Query Frame = 1
Query: 52 SDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSVDLXXXXXXXXXXXXXXXXGRPKSVLELGCGHGFPGIVALQQGVR-VCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEE---RGDGGGLFDFILTAETLYTTAVADKVLDMVARHL--APGGQALVASKRFYFGTGGSTQYFRESIAARRPAAAEVSRRLVCSDVAVIDTGKGNIREVLRVSW 723
+D+ G+YEGG K+WE +LDLV+ L + + SVLELGCGHG PGI ALQQG V FSD+N+EV+E T PNVR NV+ + AE+Y+G WSS+S +E + FD ILTAET+YT AVA ++ + RHL AP +ALVA+K++YFGT GS Q+F + A A+ V G+ NIRE++++++
Sbjct: 82 TDVQTGVYEGGFKLWECALDLVKLLETQRRQGAT-------------------MSASVLELGCGHGLPGIYALQQGAELVTFSDYNKEVLELTTCPNVRQNVDEQVFERAEFYAGAWSSMSQYMETMELKTQDQMQFDLILTAETIYTDAVAVELYQTIKRHLRRAPNARALVAAKKYYFGTNGSVQHFVGLVRADGVFTADT--------VWQERDGRSNIREIVQLTY 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12667.2036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12667.2036.1 >prot_E-fasciculatus_F_contig12667.2036.1 ID=prot_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp LTQRTPKRAACPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSFSback to top mRNA from alignment at E-fasciculatus_F_contig12667:462..3692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12667.2036.1 ID=mRNA_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3231bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12667:462..3692- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12667:462..3692- >mRNA_E-fasciculatus_F_contig12667.2036.1 ID=mRNA_E-fasciculatus_F_contig12667.2036.1|Name=mRNA_E-fasciculatus_F_contig12667.2036.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12667:462..3692- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |