prot_E-fasciculatus_F_contig12657.2032.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12657.2032.1
Unique Nameprot_E-fasciculatus_F_contig12657.2032.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length223
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12657.2032.1 vs. uniprot
Match: D8LJV2_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV2_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 7.240e-139
Identity = 209/225 (92.89%), Postives = 215/225 (95.56%), Query Frame = 0 
Query:    1 RLQRNTVVAAVRLVQPLVKASNARGLASCPL-VHNGGRSPKAS-TVVAFQKLLPRAPCRQVTSTTTTQQRQAAEVDTHGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKMMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLQEGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQ 223
            +L+RNTVVAAVRLV+PLVKASNARGLASCPL VHN G SPKAS +  A QKLLPRAPCRQVTSTTTTQQRQ AEVD  GQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYK+MGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLL+EGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQ
Sbjct:    2 QLRRNTVVAAVRLVRPLVKASNARGLASCPLRVHNSGTSPKASASCAAVQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQ 226
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12657.2032.1 vs. uniprot
Match: A0A484DVK9_BRELC (WW domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVK9_BRELC)

HSP 1 Score: 73.2 bits (178), Expect = 4.500e-12
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 0 
Query:  112 MMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLQEGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTF 218
            M+G  +  +     S+ + Q+C+N+    ++Y    +   F  +   L  +VWL+ RRL  EGE+GK +QEL+FD LW ET  ++R + +SE+ + KYLA+ QQ  F
Sbjct:    1 MLGFLNEDDRLFRHSSAVFQSCMNHTAQPDYYRALGLPQSFRAQQAILMAHVWLVHRRLALEGEKGKIMQELVFDRLWEETVVRIRYLNISELTVNKYLAQVQQICF 107
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12657.2032.1 vs. uniprot
Match: A0A482RPP5_9ARCH (Ubiq_cyt_C_chap domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPP5_9ARCH)

HSP 1 Score: 64.3 bits (155), Expect = 2.410e-9
Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:  125 SSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLQEGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTF 218
            S+  +LQ C   A    W   G + ++F  + L L  +VW++ +RL+QEG  G +VQE LFDELW ++ +++R+  V E+ +   L E Q  +F
Sbjct:   47 SAKHILQNCQLQAGHPFWQLRGGVGSDFRSRHLLLVLHVWMVHKRLMQEGREGLRVQEALFDELWEDSSQRLRAQGVGELSVNARLKEVQSLSF 140
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12657.2032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJV2_ECTSI7.240e-13992.89WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A484DVK9_BRELC4.500e-1236.45WW domain-containing protein n=1 Tax=Bremia lactuc... [more]
A0A482RPP5_9ARCH2.410e-936.17Ubiq_cyt_C_chap domain-containing protein (Fragmen... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021150Ubiquinol-cytochrome c chaperone/UPF0174PFAMPF03981Ubiq_cyt_C_chapcoord: 155..216
e-value: 5.9E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR12184:SF1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1coord: 57..219
IPR007129Ubiquinol-cytochrome c chaperone, CBP3PANTHERPTHR12184BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG ZIC3-BINDING PROTEINcoord: 57..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12657contigE-fasciculatus_F_contig12657:80..3013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12657.2032.1mRNA_E-fasciculatus_F_contig12657.2032.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12657 80..3013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12657.2032.1 ID=prot_E-fasciculatus_F_contig12657.2032.1|Name=mRNA_E-fasciculatus_F_contig12657.2032.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=223bp
RLQRNTVVAAVRLVQPLVKASNARGLASCPLVHNGGRSPKASTVVAFQKL
LPRAPCRQVTSTTTTQQRQAAEVDTHGQVSDERPAKDAVNSHELHEKWGW
KTSDPLYWPYKMMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISN
EFLPKLLWLSTNVWLMSRRLLQEGERGKKVQELLFDELWRETKRQMRSIE
VSEMMLKKYLAEAQQHTFITLVQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007129Ubiqinol_cyt_c_chaperone_CPB3
IPR021150Ubiq_cyt_c_chap/UPF0174