prot_E-fasciculatus_F_contig12645.2024.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12645.2024.1
Unique Nameprot_E-fasciculatus_F_contig12645.2024.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length114
Homology
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A6H5JZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW8_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 1.890e-72
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE
Sbjct:  551 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 664          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: D7G7A4_ECTSI (Similar to chromodomain helicase DNA binding protein 4 isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A4_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.890e-72
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE
Sbjct:  599 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 712          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A2N9GH18_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GH18_FAGSY)

HSP 1 Score: 120 bits (302), Expect = 1.720e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            K   F+     P  L  G ++PYQLEGLNFLR SW   T+VILADEMGLGKTIQ++AF+ S+  E PS    P LV+ PLST  NWERE   W P++N V +VG+ ++RTV  E
Sbjct:   68 KQKEFQQYEHSPDFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEENPS----PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSQARTVIRE 177          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A1D1YBA8_9ARAE (CHD3-type chromatin-remodeling factor PICKLE n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YBA8_9ARAE)

HSP 1 Score: 120 bits (302), Expect = 1.800e-29
Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 0
Query:    5 FELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            F+     P  L  G ++PYQLEGLNFLR SW  NT+VILADEMGLGKTIQ++AF+ S+L E PS    P L++ PLST  NWERE   W P++N V + G+ ++R V  E
Sbjct:  272 FQQYEHSPKFLSGGTLHPYQLEGLNFLRYSWSKNTHVILADEMGLGKTIQSIAFLASLLEENPS----PHLIVAPLSTLRNWEREFATWAPQMNVVMYFGSAQARAVIRE 377          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A388KTT0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KTT0_CHABU)

HSP 1 Score: 120 bits (300), Expect = 3.400e-29
Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTV 111
            KPT F  L   P  L  G ++PYQLEG+N+LR SWW   ++ILADEMGLGKTIQT+AF+ S+  E    E  P LV+ PLST  NWERE   W P L  V +VG  K+R+V
Sbjct:  587 KPTTFSALEATPQNLTGGDLHPYQLEGVNWLRFSWWQGRHIILADEMGLGKTIQTIAFLASLKDE---GEDGPHLVVAPLSTLRNWEREFATWAPFLYVVMYVGTAKARSV 694          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A9V9Q4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9Q4_MONBE)

HSP 1 Score: 119 bits (298), Expect = 6.300e-29
Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    4 RFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTV 111
            RF+ L +QP  ++ G ++ YQLEGLNFL  SW  N NVILADEMGLGKT+QT+AFV  + H   +++  P L++ PLST  NWERE   W P+L+ V F+G   SR V
Sbjct:  622 RFKSLKKQPSNIKHGELHDYQLEGLNFLIFSWMRNRNVILADEMGLGKTLQTIAFVSWLKH---TAQRGPFLIVAPLSTCPNWEREFAQWAPDLHVVTFIGGASSREV 726          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A7C9EPY0_OPUST (DNA helicase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EPY0_OPUST)

HSP 1 Score: 109 bits (272), Expect = 8.120e-29
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   15 LRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTV 111
            L  G ++PYQLEGLNFLR SW   T+VILADEMGLGKTIQ++AF+ S+  E       P LV+ PLST  NWERE   W P++N V +VG+ ++R+V
Sbjct:    3 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEEGIY----PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARSV 95          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A067FMW3_CITSI (Uncharacterized protein n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FMW3_CITSI)

HSP 1 Score: 119 bits (297), Expect = 8.280e-29
Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            KP  F+     P  L  G ++PYQLEGLNFLR SW   T+VILADEMGLGKTIQ++AF+ S+  ER S    P LV+ PLST  NWERE   W P++N V +VG  ++R +  E
Sbjct:  267 KPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS----PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A067FJF2_CITSI (Uncharacterized protein n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FJF2_CITSI)

HSP 1 Score: 119 bits (297), Expect = 8.410e-29
Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            KP  F+     P  L  G ++PYQLEGLNFLR SW   T+VILADEMGLGKTIQ++AF+ S+  ER S    P LV+ PLST  NWERE   W P++N V +VG  ++R +  E
Sbjct:  267 KPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS----PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376          
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Match: A0A2H5NW06_CITUN (Uncharacterized protein n=2 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NW06_CITUN)

HSP 1 Score: 119 bits (297), Expect = 8.510e-29
Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALE 114
            KP  F+     P  L  G ++PYQLEGLNFLR SW   T+VILADEMGLGKTIQ++AF+ S+  ER S    P LV+ PLST  NWERE   W P++N V +VG  ++R +  E
Sbjct:  252 KPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS----PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 361          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12645.2024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZW8_9PHAE1.890e-72100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7A4_ECTSI1.890e-72100.00Similar to chromodomain helicase DNA binding prote... [more]
A0A2N9GH18_FAGSY1.720e-2953.51Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A1D1YBA8_9ARAE1.800e-2953.64CHD3-type chromatin-remodeling factor PICKLE n=1 T... [more]
A0A388KTT0_CHABU3.400e-2954.05Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A9V9Q4_MONBE6.300e-2952.78Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7C9EPY0_OPUST8.120e-2955.67DNA helicase (Fragment) n=1 Tax=Opuntia streptacan... [more]
A0A067FMW3_CITSI8.280e-2952.63Uncharacterized protein n=2 Tax=Citrus sinensis Ta... [more]
A0A067FJF2_CITSI8.410e-2952.63Uncharacterized protein n=2 Tax=Citrus sinensis Ta... [more]
A0A2H5NW06_CITUN8.510e-2952.63Uncharacterized protein n=2 Tax=Citrus unshiu TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..114
e-value: 5.2E-37
score: 129.1
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 38..107
e-value: 1.2E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR45623:SF17CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATEDcoord: 8..112
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 8..112
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12645contigE-fasciculatus_F_contig12645:2317..3216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12645.2024.1mRNA_E-fasciculatus_F_contig12645.2024.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12645 2317..3216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12645.2024.1 ID=prot_E-fasciculatus_F_contig12645.2024.1|Name=mRNA_E-fasciculatus_F_contig12645.2024.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=114bp
KPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLG
KTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCV
RFVGNMKSRTVALE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR038718SNF2-like_sf